gelsight-mini-pretrain / scripts /make_analytical_plots.py
yxma's picture
scripts: update make_analytical_plots.py for v3 schema (domain column) + 10-subset coverage
4dbc2ee verified
#!/usr/bin/env python3
"""Generate analytical plots for the dataset card:
- composition.png frames per subset, stacked by markered/markerless
- resolution_distribution.png 320x240 vs 640x480 per subset
- force_distribution.png FEATS f_z histogram + indenter shapes
- threedcal_coverage.png (x,y) probe-position heatmap
- rtm_digit_distribution.png digit-class counts
"""
import glob
import os
import matplotlib
matplotlib.use("Agg")
import matplotlib.pyplot as plt
import numpy as np
import pyarrow.parquet as pq
BASE = "/media/yxma/Disk1/yuxiang/mini_data_parquet"
OUT = f"{BASE}/assets"
SUBSETS = ["fota_labeled", "fota_unlabeled", "threedcal", "feats",
"feelanyforce", "gelslam", "tactile_tracking", "real_tactile_mnist",
"sim_tactile_mnist", "sim_starstruck"]
def scan_subset(sub, columns):
paths = sorted(glob.glob(f"{BASE}/{sub}/*.parquet"))
out = {c: [] for c in columns}
for p in paths:
t = pq.read_table(p, columns=columns)
for c in columns:
out[c].extend(t.column(c).to_pylist())
return out
# 1. composition stacked bar
def plot_composition():
counts = {}
for sub in SUBSETS:
d = scan_subset(sub, ["markered"])
n_m = sum(1 for x in d["markered"] if x)
n_u = sum(1 for x in d["markered"] if not x)
counts[sub] = (n_m, n_u)
labels = SUBSETS
m = np.array([counts[s][0] for s in labels])
u = np.array([counts[s][1] for s in labels])
fig, ax = plt.subplots(figsize=(11, 4.5))
x = np.arange(len(labels))
ax.bar(x, u, label="markerless", color="#4c95d6")
ax.bar(x, m, bottom=u, label="markered", color="#d6794c")
for i, s in enumerate(labels):
total = counts[s][0] + counts[s][1]
ax.text(i, total + max(m+u)*0.005, f"{total:,}",
ha="center", va="bottom", fontsize=9)
ax.set_xticks(x)
ax.set_xticklabels(labels, rotation=20, ha="right")
ax.set_ylabel("Frames")
ax.set_title("gelsight-mini-pretrain · frames per subset (stacked by gel variant)")
ax.legend(loc="upper right", frameon=False)
ax.spines[["top","right"]].set_visible(False)
plt.tight_layout()
plt.savefig(f"{OUT}/composition.png", dpi=140)
plt.close()
print("wrote composition.png")
# 2. resolution distribution
def plot_resolution():
cols = {}
for sub in SUBSETS:
d = scan_subset(sub, ["height", "width"])
from collections import Counter
c = Counter(zip(d["width"], d["height"]))
cols[sub] = c
all_dims = sorted({k for sub in cols.values() for k in sub.keys()})
colors = {(640,480): "#4c95d6", (320,240): "#d6794c"}
fig, ax = plt.subplots(figsize=(11, 4.5))
x = np.arange(len(SUBSETS))
bottom = np.zeros(len(SUBSETS))
for d in all_dims:
vals = np.array([cols[s].get(d, 0) for s in SUBSETS])
ax.bar(x, vals, bottom=bottom,
color=colors.get(d, "#999999"),
label=f"{d[0]}×{d[1]} ({vals.sum():,})")
bottom += vals
ax.set_xticks(x)
ax.set_xticklabels(SUBSETS, rotation=20, ha="right")
ax.set_ylabel("Frames")
ax.set_title("Image resolution per subset (GelSight Mini native modes)")
ax.legend(loc="upper right", frameon=False)
ax.spines[["top","right"]].set_visible(False)
plt.tight_layout()
plt.savefig(f"{OUT}/resolution_distribution.png", dpi=140)
plt.close()
print("wrote resolution_distribution.png")
# 3. FEATS force distribution + indenter mix
def plot_feats_force():
d = scan_subset("feats", ["f_z", "f_x", "f_y", "indenter"])
fz = np.array([x for x in d["f_z"] if x is not None])
fig, axes = plt.subplots(1, 2, figsize=(11, 4))
axes[0].hist(fz, bins=60, color="#4c95d6", edgecolor="white")
axes[0].axvline(0, color="#444", linestyle="--", linewidth=1)
axes[0].set_xlabel("normal force f_z (N)")
axes[0].set_ylabel("Frames")
axes[0].set_title(f"FEATS normal force distribution (n={len(fz):,})")
axes[0].spines[["top","right"]].set_visible(False)
# indenter mix
from collections import Counter
c = Counter(x or "unknown" for x in d["indenter"])
items = sorted(c.items(), key=lambda kv: -kv[1])
keys = [k for k,_ in items]; vals = [v for _,v in items]
axes[1].barh(range(len(keys)), vals, color="#d6794c", edgecolor="white")
axes[1].set_yticks(range(len(keys)))
axes[1].set_yticklabels(keys)
axes[1].invert_yaxis()
axes[1].set_xlabel("Frames")
axes[1].set_title("FEATS indenter-shape mix")
axes[1].spines[["top","right"]].set_visible(False)
for i, v in enumerate(vals):
axes[1].text(v + max(vals)*0.005, i, f"{v:,}", va="center", fontsize=9)
plt.tight_layout()
plt.savefig(f"{OUT}/force_distribution.png", dpi=140)
plt.close()
print("wrote force_distribution.png")
# 4. 3DCal probe-position heatmap
def plot_threedcal_coverage():
d = scan_subset("threedcal", ["x_mm", "y_mm"])
x = np.array([v for v in d["x_mm"] if v is not None])
y = np.array([v for v in d["y_mm"] if v is not None])
fig, ax = plt.subplots(figsize=(6.5, 5.5))
H, xe, ye = np.histogram2d(x, y, bins=[40, 30])
im = ax.pcolormesh(xe, ye, H.T, cmap="magma")
ax.set_xlabel("x (mm)")
ax.set_ylabel("y (mm)")
ax.set_title(f"py3DCal calibration grid — probe coverage (n={len(x):,})")
plt.colorbar(im, ax=ax, label="frames per (x,y) cell")
plt.tight_layout()
plt.savefig(f"{OUT}/threedcal_coverage.png", dpi=140)
plt.close()
print("wrote threedcal_coverage.png")
# 5. RTM digit-class distribution
def plot_rtm_digits():
d = scan_subset("real_tactile_mnist", ["digit_class"])
from collections import Counter
c = Counter(x for x in d["digit_class"] if x is not None)
keys = list(range(10))
vals = [c.get(k, 0) for k in keys]
fig, ax = plt.subplots(figsize=(8, 4))
ax.bar(keys, vals, color="#4c95d6", edgecolor="white")
for k, v in zip(keys, vals):
ax.text(k, v + max(vals)*0.005, f"{v:,}",
ha="center", va="bottom", fontsize=9)
ax.set_xticks(keys)
ax.set_xlabel("digit class")
ax.set_ylabel("frames")
ax.set_title(f"Real Tactile MNIST · digit-class balance (total {sum(vals):,})")
ax.spines[["top","right"]].set_visible(False)
plt.tight_layout()
plt.savefig(f"{OUT}/rtm_digit_distribution.png", dpi=140)
plt.close()
print("wrote rtm_digit_distribution.png")
if __name__ == "__main__":
plot_composition()
plot_resolution()
plot_feats_force()
plot_threedcal_coverage()
plot_rtm_digits()
print("done")