pdb_code stringlengths 4 4 | release_date stringdate 1991-10-15 00:00:00 2026-01-28 00:00:00 | classification stringclasses 1
value | chains stringlengths 61 5.01k | formula_weight float64 387 271k | symmetry stringclasses 66
values | crystal_structure(a|b|c|alpha|beta|gamma) stringlengths 5 45 | exptl_method stringclasses 6
values | synthesis_comment stringclasses 73
values | authors stringlengths 7 521 ⌀ | publication stringlengths 15 254 | publication_ref(doi|pubmed|csd|issn|astm) stringlengths 4 62 | publication_country stringclasses 9
values | subtitle stringlengths 6 213 | tags stringlengths 9 287 | sequence_related_designs_above_50_bits stringlengths 8 1.39k ⌀ | sequence_related_natural_proteins_above_50_bits stringlengths 8 115k ⌀ | structure_related_designs_above_95_lddt stringlengths 7 1.13k ⌀ | structure_related_natural_above_95_lddt stringclasses 247
values | highest_sequence_related_design stringlengths 7 10 ⌀ | highest_sequence_related_natural_protein stringlengths 8 10 ⌀ | highest_structure_related_design stringlengths 7 18 ⌀ | highest_structure_related_natural_protein stringlengths 7 18 ⌀ | cath_full stringlengths 9 3.45k ⌀ | data_curation_comments stringclasses 3
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
2kjo | 2010-06-23 | other | id:A;type:U;source:unknown;length:26;seq_nat:KKALLALALHHLAHLALHLALALKKA;seq_unnat:KKALLALALHHLAHLALHLALALKKA | 2,787.523 | P 1 | 1.000|1.000|1.000|90.00|90.00|90.00 | SOLUTION NMR | null | J. Georgescu;V.H. Munhoz;B. Bechinger | "NMR structures of the histidine-rich peptide LAH4 in micellar environments: membrane insertion, pH-dependent mode of antimicrobial action, and DNA transfection", Biophys.J., 99, 2507-2515 | 10.1016/j.bpj.2010.05.038|20959091|0030|0006-3495|BIOJAU | US | Ph dependent structures of lah4 in micellar environment: mode of acting | de novo protein;lah4 neutral | null | null | null | null | 2kjn(46) | null | 2l9a(0.6726999879) | null | null | null |
2kl8 | 2009-07-28 | other | id:A;type:D;source:artificial gene;length:86;seq_nat:MEMDIRFRGDDLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRITGVPEQVRKELAKEAERLAKEFNITVTYTIRLEHHHHHH;seq_unnat:MEMDIRFRGDDLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRITGVPEQVRKELAKEAERLAKEFNITVTYTIRLEHHHHHH | 10,066.479 | P 1 | 1.000|1.000|1.000|90.00|90.00|90.00 | SOLUTION NMR | null | N. Koga;R. Tatsumi-Koga;G. Liu;R. Xiao;T.B. Acton;G.T. Montelione;D. Baker | "Principles for designing ideal protein structures", Nature, 491, 222-227 | 10.1038/nature11600|23135467|0006|0028-0836|NATUAS | UK | Solution nmr structure of de novo designed ferredoxin-like fold protein, northeast structural genomics consortium target or15 | ferrodoxin fold;protein structure initiative;psi-2;protein nmr;northeast structural genomics consortium (nesg);structural genomics;de novo protein;target or15 | 2mtl(162);4ky3(143);4kyz(143);4pww(139);5cw9(128);4nez(126);4ney(126);4rjv(122);9qud(109);9qui(109);9quc(109);6zv9(109);6wxp(109);6wxo(109);9qul(106);9quo(106);9qup(51) | null | null | null | 2mtl(162) | null | 4nez(0.8245999813) | 1u8s(0.621999979) | 3.30.70.1140;3.30.70.790;3.30.70.2860;3.30.70.1650;3.30.70.1430;3.30.70.80;3.30.70.2810;3.30.70.870;3.30.70.1280;3.30.70.1520;3.30.70.250;3.30.70.860;3.30.70.240;3.30.70.600;3.30.70.2280;3.30.70.1440;3.30.70.1750;3.30.70.340;3.30.70.1130;3.30.70.2940;3.30.70.330;3.30.70.1940;3.30.70.1170;3.30.70.1200;3.30.70.1320;3.30.... | null |
2klw | 2009-07-21 | other | id:A;type:U;source:unknown;length:32;seq_nat:XPKGPKGPKGPKGPKGPKGPKGPKGPKGPKGX;seq_unnat:(ACE)PKGPKGPKGPKGPKGPKGPKGPKGPKGPKG(NH2)|id:B;type:U;source:unknown;length:32;seq_nat:XDPGDPGDPGDPGDPGDPGDPGDPGDPGDPGX;seq_unnat:(ACE)D(HYP)GD(HYP)GD(HYP)GD(HYP)GD(HYP)GD(HYP)GD(HYP)GD(HYP)GD(HYP)GD(HYP)G(NH2)|id:C;type:U;source:unk... | 2,875.524 | null | ||||| | SOLUTION NMR | Fmoc based solid phase peptide synthesis | J.A. Fallas;V. Gauba;J.D. Hartgerink | "Solution structure of an ABC collagen heterotrimer reveals a single-register helix stabilized by electrostatic interactions", J.Biol.Chem., 284, 26851-26859 | 10.1074/jbc.M109.014753|19625247|0071|0021-9258|JBCHA3 | US | Solution structure of an abc collagen heterotrimer reveals a single-register helix stabilized by electrostatic interactions | synthetic peptide;collagen;de novo protein;heterotrimer | null | null | null | null | null | null | 5yan(0.8952000141) | null | null | null |
2koz | 2010-10-06 | other | id:A;type:U;source:unknown;length:33;seq_nat:ACNDRDCSLDCIMKGYNTGSCVRGSCQCRRTSG;seq_unnat:ACNDRDCSLDCIMKGYNTGSCVRGSCQCRRTSG | 3,566.044 | null | ||||| | SOLUTION NMR | Chemically synthesized | C. Tian;T. Kouno;L. Luo;M. Mizuguchi;S. Zhu | To be published | |||| | null | Solution structure of nasonin-1 | alpha/beta structure;de novo protein;disulfide bonds | 2kp0(76) | null | null | null | 2kp0(76) | null | 2kp0(0.8180000186) | 1r1g(0.8610000014) | 3.30.30.10 | null |
2kp0 | 2010-10-06 | other | id:A;type:U;source:unknown;length:33;seq_nat:ACNDRDCSLDCIMKGYNFGKCVRGSCQCRRTSG;seq_unnat:ACNDRDCSLDCIMKGYNFGKCVRGSCQCRRTSG | 3,654.216 | null | ||||| | SOLUTION NMR | Chemically synthesized | C. Tian;T. Kouno;L. Luo;M. Mizuguchi;S. Zhu | To be published | |||| | null | Solution structure of nasonin-1m | alpha/beta structure;de novo protein;disulfide bonds | 2koz(75) | null | null | null | 2koz(75) | null | 2koz(0.8223000169) | 1r1g(0.847299993) | 3.30.30.10;1.10.287.390 | null |
2kpo | 2009-12-01 | other | id:A;type:D;source:artificial gene;length:111;seq_nat:MLLYVLIISNDKKLIEEARKMAEKANLELRTVKTEDELKKYLEEFRKESQNIKVLILVSNDEELDKAKELAQKMEIDVRTRKVTSPDEAKRWIKEFSEEGGSLEHHHHHH;seq_unnat:MLLYVLIISNDKKLIEEARKMAEKANLELRTVKTEDELKKYLEEFRKESQNIKVLILVSNDEELDKAKELAQKMEIDVRTRKVTSPDEAKRWIKEFSEEGGSLEHHHHHH | 13,077.996 | null | ||||| | SOLUTION NMR | null | G. Liu;R. Koga;N. Koga;D. Baker;G.T. Montelione | To be published | |||| | null | Solution nmr structure of de novo designed rossmann 2x2 fold protein, northeast structural genomics consortium target or16 | de novo designed;gft nmr;protein structure initiative;psi-2;northeast structural genomics consortium;structural genomics;rossmann fold;de novo protein;nesg | 2lv8(205);6vgb(100);6vg7(98);6vga(94);6xeh(59);2l69(59);2lci(59);2mr5(58);2lrh(57);2lvb(54);2lnd(52) | null | null | null | 2lv8(205) | null | 2lv8(0.8424000144) | 3gx1(0.5360000134) | 3.40.50.11370;3.40.50.10580;3.40.50.280;3.40.50.11420;3.40.50.10050;3.40.50.10700;3.40.50.1860;3.40.50.720;3.40.50.10330;3.40.50.2300;3.40.50.12570;3.40.50.11410;3.40.50.800;3.40.50.12090;3.40.50.10140;3.40.50.10190;3.40.50.300;3.40.50.10090;3.40.50.10860;3.40.190.80;3.40.50.11060;3.40.50.1980;3.40.50.11230;3.40.50.20;... | null |
2l69 | 2011-01-12 | other | id:A;type:D;source:artificial gene;length:135;seq_nat:MNIVIVVFSTDEETLRKFKDIIKKNGFKVRTVRSPQELKDSIEELVKKYNATIVVVVVDDKEWAEKAIRFVKSLGAQVLIIIYDQDQNRLEEFSREVRRRGFEVRTVTSPDDFKKSLERLIREVGSLEHHHHHH;seq_unnat:MNIVIVVFSTDEETLRKFKDIIKKNGFKVRTVRSPQELKDSIEELVKKYNATIVVVVVDDKEWAEKAIRFVKSLGAQVLIIIYDQDQNRLEEFSREVRRRGFEVRTVTSPDDFKKSLERLI... | 15,857.213 | null | ||||| | SOLUTION NMR | null | G. Liu;N. Koga;R. Koga;R. Xiao;L. Mao;D. Patel;C. Ciccosanti;A. Hamilton;B. Mao;T.B. Acton;D. Baker;G.T. Montelione | To be published | |||| | null | Solution nmr structure of de novo designed protein, p-loop ntpase fold, northeast structural genomics consortium target or28 | unknown function;protein structure initiative;northeast structural genomics consortium (nesg);structural genomics;psi-biology;de novo protein | 2lci(92);2lr0(91);2lrh(88);2l82(88);2mr6(68);2lta(56);2lvb(56);7bpl(53) | null | null | null | 2lci(92) | null | 5gaj(0.649699986) | 8abp(0.5266000032) | null | null |
2l82 | 2011-02-09 | other | id:A;type:D;source:artificial gene;length:164;seq_nat:MSQIFVVFSSDPEILKEIVREIKRQGVRVVLLYSDQDEKRRRERLEEFEKQGVDVRTVEDKEDFRENIREIWERYPQLDVVVIVTTDDKEWIKDFIEEAKERGVEVFVVYNNKDDDRRKEAQQEFRSDGVDVRTVSDKEELIEQVRRFVRKVGSLEHHHHHH;seq_unnat:MSQIFVVFSSDPEILKEIVREIKRQGVRVVLLYSDQDEKRRRERLEEFEKQGVDVRTVEDKEDFRENIREIWERYPQLDVVVIVTTDDKEWIK... | 19,701.045 | null | ||||| | SOLUTION NMR | null | G. Liu;N. Koga;R. Koga;R. Xiao;K. Hamilton;H. Janjua;S. Tong;T.B. Acton;J. Everett;D. Baker;G.T. Montelione | To be published | |||| | null | Solution nmr structure of de novo designed protein, p-loop ntpase fold, northeast structural genomics consortium target or32 | northeast structural genomics consortium (nesg) psi-biology;de novo protein;structural genomics;protein structure initiative | 2l69(94);2lci(75);2lr0(74);2lrh(73);2mr5(66);6xeh(61);5gaj(60);2lvb(59);2lnd(58) | null | null | null | 2l69(94) | null | 2lrh(0.6194999814) | 2og2(0.4765999913) | 3.40.1010.10;3.40.970.30;3.40.50.1100;3.40.50.720;3.40.50.300;3.40.50.10800;3.40.50.1980;3.40.50.20 | null |
2l96 | 2012-02-01 | other | id:X;type:U;source:unknown;length:24;seq_nat:KKLKLAPAKLALLWKALALKLKKA;seq_unnat:KKLKLAPAKLALLWKALALKLKKA | 2,666.508 | P 1 | 1.000|1.000|1.000|90.00|90.00|90.00 | SOLUTION NMR | Synthesized by solid phase synthesis | L.S. Vermeer;T.T. Bui;Y. Lan;E. Jumagulova;J. Kozlowska;C. McIntyre;A.F. Drake;J.A. Mason | To be published | |||| | null | Solution structure of lak160-p7 | antimicrobial protein;ampiphatic;proline;cationic;de novo protein;de novo protein, antimicrobial protein | null | null | null | null | 2l99(34) | null | 2l99(0.6822999716) | null | null | null |
2l99 | 2012-02-01 | other | id:X;type:U;source:unknown;length:24;seq_nat:KKLKLALAKPALLWKALALKLKKA;seq_unnat:KKLKLALAKPALLWKALALKLKKA | 2,666.508 | P 1 | 1.000|1.000|1.000|90.00|90.00|90.00 | SOLUTION NMR | Synthesized by solid phase synthesis | L.S. Vermeer;T.T. Bui;Y. Lan;E. Jumagulova;J. Kozlowska;C. McIntyre;A.F. Drake;J.A. Mason | To be published | |||| | null | Solution structure of lak160-p10 | antimicrobial protein;ampiphatic;proline;cationic;de novo protein;de novo protein, antimicrobial protein | null | null | null | null | 2l9a(34) | null | 2kjn(0.6862999797) | null | null | null |
2l9a | 2012-02-01 | other | id:X;type:U;source:unknown;length:24;seq_nat:KKLKLALAKLAPLWKALALKLKKA;seq_unnat:KKLKLALAKLAPLWKALALKLKKA | 2,666.508 | P 1 | 1.000|1.000|1.000|90.00|90.00|90.00 | SOLUTION NMR | Synthesized by solid phase synthesis | L.S. Vermeer;T.T. Bui;Y. Lan;E. Jumagulova;J. Kozlowska;C. McIntyre;A.F. Drake;J.A. Mason | To be published | |||| | null | Solution structure of lak160-p12 | antimicrobial protein;ampiphatic;proline;cationic;de novo protein;de novo protein, antimicrobial protein | null | null | null | null | 2l99(34) | null | 2kjn(0.6924999952) | null | null | null |
2lci | 2011-06-29 | other | id:A;type:D;source:artificial gene;length:135;seq_nat:MKILILINTNNDELIKKIKKEVENQGYQVRDVNDSDELKKEMKKLAEEKNFEKILIISNDKQLLKEMLELISKLGYKVFLLLQDQDENELEEFKRKIESQGYEVRKVTDDEEALKIVREFMQKAGSLEHHHHHH;seq_unnat:MKILILINTNNDELIKKIKKEVENQGYQVRDVNDSDELKKEMKKLAEEKNFEKILIISNDKQLLKEMLELISKLGYKVFLLLQDQDENELEEFKRKIESQGYEVRKVTDDEEALKIVREFM... | 16,031.43 | null | ||||| | SOLUTION NMR | null | G. Liu;N. Koga;R. Koga;R. Xiao;H.T. Lee;H. Janjua;C. Ciccosanti;T.B. Acton;J. Everett;D. Baker;G.T. Montelione | To be published | |||| | null | Solution nmr structure of de novo designed protein, p-loop ntpase fold, northeast structural genomics consortium target or36 (casd target) | northeast structural genomics consortium;protein structure initiative;structural genomics;psi-biology;de novo protein;nesg | 2lrh(245);2lr0(244);2l69(104);2l82(79);2lta(66);2mr5(64);2lv8(60);2kpo(60);2lvb(57);2lnd(57) | null | null | null | 2lrh(245) | null | 2lr0(0.7865999937) | 2pey(0.5070000291) | 3.40.50.11960;3.40.50.9100;3.40.50.10580;3.40.50.11900;3.40.50.10350;3.40.50.11400;3.40.50.720;3.40.50.10330;3.40.50.2300;3.40.50.1970;3.40.50.360;3.40.50.1220;3.40.50.10140;3.40.50.450;3.40.50.10830;3.40.50.300;3.40.50.10740;3.40.50.10090;3.40.50.1980;3.40.50.11230;3.40.50.20;3.40.50.10490;3.40.50.10440;3.40.50.1400;3... | null |
2lhc | 2012-02-29 | other | id:A;type:D;source:artificial gene;length:56;seq_nat:TTYKLILNLKQAKEEAIKELVDAGTAEKYFKLIANAKTVEGVWTLKDEIKTFTVTE;seq_unnat:TTYKLILNLKQAKEEAIKELVDAGTAEKYFKLIANAKTVEGVWTLKDEIKTFTVTE | 6,355.346 | null | ||||| | SOLUTION NMR | null | Y. He;Y. Chen;P.A. Alexander;P.N. Bryan;J. Orban | "Mutational tipping points for switching protein folds and functions", Structure, 20, 283-291 | 10.1016/j.str.2011.11.018|22325777|2005|0969-2126|STRUE6 | UK | Ga98 solution structure | de novo protein | 2lhd(108);2lhg(106);2jws(104);2lhe(104);2jwu(101);7r0r(62) | 3mp9(62);2kbt(62);1fcc(61);2zw0(61);2zw1(61);2igg(61);1ibx(61);2i38(61);2i2y(61);2kn4(61);1pn5(61);3ui3(61);9g4t(61);2gb1(60);1pga(60);1pgb(60);1gb1(60);3gb1(60);1uwx(60);1qkz(60);1pgx(60);2den(60);2khu(60);2cwb(60);2khw(60);2kwd(59);8ug0(59);2ju6(59);8ug2(59);2k0p(59);2lgi(59);2jsv(59);2qmt(59);2gi9(59);2kq4(59);1fd6(... | null | null | 2lhd(108) | 3mp9(62) | 2jws(0.74150002) | 2fs1(0.7084000111) | 1.20.5.420;1.10.8.40;1.10.8.650 | null |
2lhd | 2012-02-29 | other | id:A;type:D;source:artificial gene;length:56;seq_nat:TTYKLILNLKQAKEEAIKELVDAGTAEKYFKLIANAKTVEGVWTYKDEIKTFTVTE;seq_unnat:TTYKLILNLKQAKEEAIKELVDAGTAEKYFKLIANAKTVEGVWTYKDEIKTFTVTE | 6,405.362 | null | ||||| | SOLUTION NMR | null | Y. He;Y. Chen;P.A. Alexander;P.N. Bryan;J. Orban | "Mutational tipping points for switching protein folds and functions", Structure, 20, 283-291 | 10.1016/j.str.2011.11.018|22325777|2005|0969-2126|STRUE6 | UK | Gb98 solution structure | de novo protein | 2lhg(109);2lhc(108);2lhe(108);2jwu(104);2jws(102);7r0r(65) | 3mp9(65);2kbt(65);1fcc(64);2zw0(64);2zw1(64);2igg(64);1ibx(64);2i38(64);2i2y(64);2kn4(64);1pn5(64);3ui3(64);9g4t(64);2gb1(63);2kwd(63);2ju6(63);1pga(63);1pgb(63);2k0p(63);1gb1(63);2lgi(63);2jsv(63);2qmt(63);3gb1(63);2gi9(63);2kq4(63);2igh(63);1igc(63);1igd(63);2igd(63);1uwx(63);1qkz(63);1pgx(63);2den(63);2khu(63);2cwb(... | null | null | 2lhg(109) | 3mp9(65) | 2kdm(0.8087999821) | 8ug2(0.7893999815) | 3.10.20.310;3.10.20.510;3.30.160.110;3.30.160.590;3.10.20.10;3.30.160.60 | null |
2lhe | 2012-02-29 | other | id:A;type:D;source:artificial gene;length:56;seq_nat:TTYKLILNLKQAKEEAIKEAVDAGIAEKYFKLIANAKTVEGVWTYKDEIKTFTVTE;seq_unnat:TTYKLILNLKQAKEEAIKEAVDAGIAEKYFKLIANAKTVEGVWTYKDEIKTFTVTE | 6,375.336 | null | ||||| | SOLUTION NMR | null | Y. He;Y. Chen;P.A. Alexander;P.N. Bryan;J. Orban | "Mutational tipping points for switching protein folds and functions", Structure, 20, 283-291 | 10.1016/j.str.2011.11.018|22325777|2005|0969-2126|STRUE6 | UK | Gb98-t25i,l20a | de novo protein | 2lhg(109);2lhd(107);2lhc(104);2jws(102);2jwu(100);7r0r(64) | 3mp9(65);2zw0(64);2igg(64);2kbt(64);1ibx(64);2i38(64);2i2y(64);2kn4(64);1pn5(64);3ui3(64);2gb1(63);1pga(63);1pgb(63);1gb1(63);1fcc(63);3gb1(63);1gb4(63);2zw1(63);1uwx(63);1qkz(63);1pgx(63);2den(63);2khu(63);2cwb(63);2khw(63);9g4t(63);2kwd(62);2ju6(62);2k0p(62);2lgi(62);2jsv(62);2qmt(62);2gi9(62);2kq4(62);1fd6(62);2igh(... | null | null | 2lhg(109) | 3mp9(65) | 2kdm(0.8323000073) | 2zw1(0.8342000246) | 3.10.20.90;3.10.20.310;3.10.20.510;3.30.160.110;3.10.20.10 | null |
2lhg | 2012-02-29 | other | id:A;type:D;source:artificial gene;length:56;seq_nat:TTYKLILNLKQAKEEAIKELVDAGIAEKYFKLIANAKTVEGVWTYKDEIKTFTVTE;seq_unnat:TTYKLILNLKQAKEEAIKELVDAGIAEKYFKLIANAKTVEGVWTYKDEIKTFTVTE | 6,417.416 | null | ||||| | SOLUTION NMR | null | Y. He;Y. Chen;P.A. Alexander;P.N. Bryan;J. Orban | "Mutational tipping points for switching protein folds and functions", Structure, 20, 283-291 | 10.1016/j.str.2011.11.018|22325777|2005|0969-2126|STRUE6 | UK | Gb98-t25i solution structure | de novo protein | 2lhd(109);2lhe(109);2lhc(106);2jws(104);2jwu(102);7r0r(63) | 3mp9(63);2kbt(63);2zw0(62);2igg(62);1ibx(62);2i38(62);2i2y(62);2kn4(62);1pn5(62);3ui3(62);2gb1(61);1pga(61);1pgb(61);1gb1(61);1fcc(61);3gb1(61);1gb4(61);2zw1(61);1uwx(61);1qkz(61);1pgx(61);2den(61);2khu(61);2cwb(61);2khw(61);9g4t(61);2kwd(60);2ju6(60);2k0p(60);2lgi(60);2jsv(60);2qmt(60);2gi9(60);2kq4(60);1fd6(60);2igh(... | null | null | 2lhd(109) | 3mp9(63) | 2jws(0.6008999944) | 2j5y(0.663500011) | 1.10.10.10;1.20.5.420;1.10.8.40;1.20.5.4730;1.10.8.10 | null |
2ln3 | 2012-02-15 | other | id:A;type:D;source:artificial gene;length:84;seq_nat:MGLTRTITSQNKEELLEIALKFISQGLDLEVEFDSTDDKEIEEFERDMEDLAKKTGVQIQKQWQGNKLRIRLKGSLEHHHHHH;seq_unnat:MGLTRTITSQNKEELLEIALKFISQGLDLEVEFDSTDDKEIEEFERDMEDLAKKTGVQIQKQWQGNKLRIRLKGSLEHHHHHH | 9,797.02 | null | ||||| | SOLUTION NMR | null | N. Koga;R. Tatsumi-Koga;G. Liu;R. Xiao;T.B. Acton;G.T. Montelione;D. Baker | "Principles for designing ideal protein structures", Nature, 491, 222-227 | 10.1038/nature11600|23135467|0006|0028-0836|NATUAS | UK | Solution nmr structure of de novo designed protein, if3-like fold, northeast structural genomics consortium target or135 (casd target) | protein structure initiative;northeast structural genomics consortium (nesg);structural genomics;psi-biology;de novo protein | null | null | null | null | 2ln3(0) | null | 6wmk(0.5652999878) | 3p04(0.6236000061) | 3.30.1370.50;3.30.110.140;3.30.110.60;3.30.110.20;3.30.160.600;3.30.1370.110;3.30.1330.20;3.30.1370.30;3.30.110.40;3.30.110.150;3.30.1370.160;3.30.160.720;3.30.110.10 | null |
2lnd | 2012-01-25 | other | id:A;type:D;source:artificial gene;length:113;seq_nat:MGKVLLVISTDTNIISSVQERAKHNYPGRYIRTATSSQDIRDIIKSMKDNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLKTAGSLEHHHHHH;seq_unnat:MGKVLLVISTDTNIISSVQERAKHNYPGRYIRTATSSQDIRDIIKSMKDNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLKTAGSLEHHHHHH | 12,705.212 | null | ||||| | SOLUTION NMR | null | G. Liu;N. Koga;R. Koga;R. Xiao;H. Lee;H. Janjua;E. Kohan;T.B. Acton;J.K. Everett;D. Baker;G.T. Montelione | To be published | |||| | null | Solution nmr structure of de novo designed protein, pfk fold, northeast structural genomics consortium target or134 | protein structure initiative;northeast structural genomics consortium (nesg);structural genomics;psi-biology;de novo protein | 2lvb(220);2mr5(57);2l82(56);2mr6(55);2lr0(52);2lrh(51);2lci(51) | null | null | null | 2lvb(220) | null | 2lvb(0.7655000091) | 1xjq(0.5156999826) | 3.40.1010.10;3.40.50.300;3.40.1010.20;3.40.50.10330;3.40.50.510;3.40.50.10090;3.40.50.2300;3.40.50.790;3.40.50.1980;3.40.50.11230 | null |
2lny | 2012-08-08 | other | id:A;type:D;source:artificial gene;length:20;seq_nat:MAAVAGLYGLGEDRQHRKKQ;seq_unnat:MAAVAGLYGLGEDRQHRKKQ | 2,233.573 | null | ||||| | SOLID-STATE NMR | null | M. Weingarth;C. Ader;A.J. Melquiond;D. Nand;O. Pongs;S. Becker;A.M. Bonvin;M. Baldus | "Supramolecular structure of membrane-associated polypeptides by combining solid-state NMR and molecular dynamics simulations", Biophys.J., 103, 29-37 | 10.1016/j.bpj.2012.05.016|22828329|0030|0006-3495|BIOJAU | US | Shb peptide structure bound to negatively charged lipid-bilayer after molecular dynamics refinement | potassium channel;de novo protein;de novo-peptide;n-type inactivation | null | null | null | null | 2lny(0) | null | 2lny(0) | null | null | null |
2lq4 | 2013-01-09 | other | id:p;type:D;source:artificial gene;length:80;seq_nat:MQALEKELAQNEWELQALEKELAQLEKELQAWNCICDIENCSNMAPLYSDQALKKKLAQLKWKLQALKKKNAQLKKKLQA;seq_unnat:MQALEKELAQNEWELQALEKELAQLEKELQAWNCICDIENCSNMAPLYSDQALKKKLAQLKWKLQALKKKNAQLKKKLQA | 9,340.964 | P 1 | 1.000|1.000|1.000|90.00|90.00|90.00 | SOLUTION NMR | null | J.K. Young;B.T. Clayton;A. Kikonyogo;T.C. Pham;A.L. Parrill | "Structural Characterization of an LPA1 Second Extracellular Loop Mimetic with a Self-Assembling Coiled-Coil Folding Constraint", Int J Mol Sci, 14, 2788-2807 | 10.3390/ijms14022788|23434648||1422-0067| | CH | Structural characterization of an lpa1 second extracellular loop mimetic with a self-assembling coiled-coil folding constraint | de novo protein;gpcr;g protein-coupled receptor | null | null | null | null | 2lq4(0) | null | 8szz(0.5303999782) | null | 1.10.287.210;1.10.287.750;1.20.58.1710;1.10.287.90;1.10.287.850;1.10.287.550;1.10.287.1060;6.10.140.820;1.10.287.470;1.10.287.230;1.10.287.130;1.10.287.690;6.10.250.1010;6.10.280.190;1.10.287.770;6.10.250.220;6.10.280.110 | null |
2lr0 | 2012-07-04 | other | id:A;type:D;source:artificial gene;length:135;seq_nat:MKILILINTNNDELIKKIKKEVENQGYQVRDVNDSDELKKEMKKLAEEKNFEKILIKSNDKQLLKEMLELISKLGYKVFLLLADQDENELEEFKRKIESQGYEVRKVTDDEEALKIVREFMQKAGSLEHHHHHH;seq_unnat:MKILILINTNNDELIKKIKKEVENQGYQVRDVNDSDELKKEMKKLAEEKNFEKILIKSNDKQLLKEMLELISKLGYKVFLLLADQDENELEEFKRKIESQGYEVRKVTDDEEALKIVREFM... | 15,990.4 | null | ||||| | SOLUTION NMR | null | G. Liu;N. Koga;R. Koga;R. Xiao;H. Lee;H. Janjua;E. Kohan;T.B. Acton;J.K. Everett;D. Baker;G.T. Montelione | To be published | |||| | null | Solution nmr structure of de novo designed protein, p-loop ntpase fold, northeast structural genomics consortium target or136 | northeast structural genomics consortium;protein structure initiative;structural genomics;psi-biology;de novo protein;nesg | 2lci(244);2lrh(240);2l69(102);2l82(78);2mr5(66);2lta(63);2lvb(59);2lnd(59);2lv8(58);2kpo(58) | null | null | null | 2lci(244) | null | 2lci(0.7960000038) | 3ecs(0.4986000061) | 3.40.50.11960;3.40.1010.10;3.40.50.9100;3.40.50.10580;3.40.50.10350;3.40.50.11400;3.40.50.1860;3.40.50.720;3.40.50.10330;3.40.50.2300;3.40.50.1970;3.40.50.800;3.40.50.360;3.40.50.1220;3.40.50.10140;3.40.50.450;3.40.50.10830;3.40.50.300;3.40.50.10740;3.40.50.10090;3.40.50.1980;3.40.50.11230;3.40.50.20;3.40.50.10440;3.40... | null |
2lr2 | 2012-09-12 | other | id:A;type:D;source:artificial gene;length:89;seq_nat:MGSSHHHHHHSSGVDNKFNKEQQNAFYEILHLPNLNEEQRNAFIQSLKDDSYIDTNNDGAYEGDELSGSQSANLLAEAKKLNDAQAPK;seq_unnat:MGSSHHHHHHSSGVDNKFNKEQQNAFYEILHLPNLNEEQRNAFIQSLKDDSYIDTNNDGAYEGDELSGSQSANLLAEAKKLNDAQAPK | 9,875.544 | null | ||||| | SOLUTION NMR | null | A.W. Barb;T.G. Ho;H. Flanagan-Steet;J.H. Prestegard | "Lanthanide binding and IgG affinity construct: Potential applications in solution NMR, MRI, and luminescence microscopy", Protein Sci., 21, 1456-1466 | 10.1002/pro.2133|22851279|0795|0961-8368|PRCIEI | US | Designed igg and lanthanide binding probe for solution nmr, mri and luminescence microscopy | de novo protein;lanthanide binding tag;z domain | null | 8uti(104);8ut0(104);9cwo(103);1q2n(100);9hxs(100);1lp1(100);1h0t(100);2spz(100);2jwd(98);1bdc(98);1bdd(98);1ss1(97);2kzi(97);2kzj(97);1fc2(94);2otk(89);2y7j(88);8r2p(87);3mzw(79);1dee(75);2b87(74);2b88(74);1zxg(74);2b89(73);3s1k(73);1edj(68);1edk(68);1edl(68);1edi(68);3qwo(59) | null | null | 2lr2(0) | 8uti(104) | 1tjb(0.5785999894) | 1q2n(0.7483999729) | 1.20.81.20;1.20.1270.150 | null |
2lrh | 2012-07-04 | other | id:A;type:D;source:artificial gene;length:135;seq_nat:MKELILINTNNDELIKKIKKEVENQGYQVRDVNDSDELKKEMKKLAEEKNFEKILIISNDKQLLKEMLELISKLGYKVFLLLQDQDENELEEFKRKIESQGYEVRKVTDDEEALKIVREFMQKAGSLEHHHHHH;seq_unnat:MKELILINTNNDELIKKIKKEVENQGYQVRDVNDSDELKKEMKKLAEEKNFEKILIISNDKQLLKEMLELISKLGYKVFLLLQDQDENELEEFKRKIESQGYEVRKVTDDEEALKIVREFM... | 16,047.385 | null | ||||| | SOLUTION NMR | null | G. Liu;N. Koga;R. Koga;R. Xiao;H. Lee;H. Janjua;E. Kohan;T.B. Acton;J.K. Everett;D. Baker;G.T. Montelione | To be published | |||| | null | Solution nmr structure of de novo designed protein, p-loop ntpase fold, northeast structural genomics consortium target or137 | northeast structural genomics consortium;protein structure initiative;structural genomics;psi-biology;de novo protein;nesg | 2lci(246);2lr0(242);2l69(101);2l82(79);2lta(66);2mr5(64);2lv8(59);2kpo(59);2lvb(57);2lnd(57) | null | null | null | 2lci(246) | null | 2lci(0.7874000072) | 2yvu(0.5133000016) | 3.40.50.10580;3.30.70.260;3.40.50.10090;3.40.50.2300;3.40.50.790 | null |
2lse | 2012-06-27 | other | id:A;type:D;source:artificial gene;length:102;seq_nat:MQEERKKLLEKLEKILDEVTDGAPDEARERIEKLAKDVKDELEEGDAKNMIEKFRDEMEQMYKDAPNAVMEQLLEEIEKLLKKAGSLVPRGSYLEHHHHHH;seq_unnat:MQEERKKLLEKLEKILDEVTDGAPDEARERIEKLAKDVKDELEEGDAKNMIEKFRDEMEQMYKDAPNAVMEQLLEEIEKLLKKAGSLVPRGSYLEHHHHHH | 11,927.562 | null | ||||| | SOLUTION NMR | null | G. Murphy;B. Sathyamoorthy;B.S. Der;M.C. Machius;S. Pulavarti;G.T. Montelione;T. Szyperski;B. Kuhlman | To be published | |||| | null | Solution nmr structure of de novo designed four helix bundle protein, northeast structural genomics consortium (nesg) target or188 | northeast structural genomics consortium;protein structure initiative;structural genomics;psi-biology;de novo protein;nesg | null | null | null | null | 2lse(0) | null | 2jua(0.5170999765) | 2hjm(0.5406000018) | 6.10.250.770;1.20.5.420;1.20.5.2620;1.20.5.1450;1.20.5.700;6.10.250.500;6.10.250.200;6.10.250.2150;6.10.250.880;1.20.5.3960;6.10.250.2060;6.10.250.1090;6.10.250.2370;6.10.250.1210;6.10.250.1020;6.10.250.1440;1.20.5.1610;6.10.250.160;6.10.250.850;6.10.250.490;6.10.250.380;1.20.5.110;1.20.5.250;1.20.50.20;1.25.40.1040;1.... | null |
2lta | 2012-06-13 | other | id:A;type:D;source:artificial gene;length:111;seq_nat:MGSKIIVIISSDDTTLEELARKIKDEGLEVYILLKDKDEKRLEEKIQKLKSQGFEVRKVKDDDDIDKWIDKIKKERPQLEVRKVTDEDQAKQILEDLKKKGSLEHHHHHH;seq_unnat:MGSKIIVIISSDDTTLEELARKIKDEGLEVYILLKDKDEKRLEEKIQKLKSQGFEVRKVKDDDDIDKWIDKIKKERPQLEVRKVTDEDQAKQILEDLKKKGSLEHHHHHH | 13,064.995 | null | ||||| | SOLUTION NMR | null | N. Koga;R. Tatsumi-Koga;G. Liu;R. Xiao;T.B. Acton;G.T. Montelione;D. Baker | "Principles for designing ideal protein structures", Nature, 491, 222-227 | 10.1038/nature11600|23135467|0006|0028-0836|NATUAS | UK | Solution nmr structure of de novo designed protein, rossmann 3x1 fold, northeast structural genomics consortium target or157 | northeast structural genomics consortium;protein structure initiative;structural genomics;psi-biology;de novo protein;nesg | null | null | null | null | 6c2u(40) | null | 2l82(0.5292999744) | 3gk3(0.5407000184) | 3.40.50.80;3.40.30.10;3.40.50.1000;3.40.50.10190;3.40.50.1100;3.40.50.720;3.40.50.300;3.40.50.620;3.40.50.11730;3.40.50.11700;3.40.1380.20;3.40.50.1980;3.40.50.800;3.40.50.20 | null |
2lv8 | 2012-08-08 | other | id:A;type:D;source:artificial gene;length:111;seq_nat:MLLYVLIISNDKKLIEEARKMAEKANLELRTVKTEDELKKYLEEFRKESQNIKVLILVSNDEELDKAKELAQKMEIDVRTRKVTSPDEAKRWIKEFSEEGGSLEHHHHHH;seq_unnat:MLLYVLIISNDKKLIEEARKMAEKANLELRTVKTEDELKKYLEEFRKESQNIKVLILVSNDEELDKAKELAQKMEIDVRTRKVTSPDEAKRWIKEFSEEGGSLEHHHHHH | 13,077.996 | null | ||||| | SOLUTION NMR | null | N. Koga;R. Tatsumi-Koga;G. Liu;R. Xiao;T.B. Acton;G.T. Montelione;D. Baker | "Principles for designing ideal protein structures", Nature, 491, 222-227 | 10.1038/nature11600|23135467|0006|0028-0836|NATUAS | UK | Solution nmr structure de novo designed rossmann 2x2 fold protein, northeast structural genomics consortium (nesg) target or16 | protein structure initiative;northeast structural genomics consortium (nesg);structural genomics;psi-biology;de novo protein | 2kpo(205);6vgb(100);6vg7(98);6vga(94);6xeh(59);2l69(59);2lci(59);2mr5(58);2lrh(57);2lvb(54);2lnd(52) | null | null | null | 2kpo(205) | null | 2kpo(0.8386999965) | 3luk(0.5544999838) | 3.40.50.11370;3.40.50.10580;3.40.50.280;3.40.50.11420;3.40.50.10050;3.40.50.10700;3.40.50.1860;3.40.50.720;3.40.50.10330;3.40.50.2300;3.40.50.12570;3.40.50.11410;3.40.50.800;3.40.50.12090;3.40.50.10140;3.40.50.10190;3.40.50.300;3.40.50.10090;3.40.50.10860;3.40.50.11060;3.40.50.1980;3.40.50.11230;3.40.50.20;3.40.50.1044... | null |
2lvb | 2012-08-08 | other | id:A;type:D;source:artificial gene;length:113;seq_nat:MGKVLLVISTDTNIISSVQERAKHNYPGREIRTATSSQDIRDIIKSMKDNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLKTAGSLEHHHHHH;seq_unnat:MGKVLLVISTDTNIISSVQERAKHNYPGREIRTATSSQDIRDIIKSMKDNGKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLKTAGSLEHHHHHH | 12,671.152 | null | ||||| | SOLUTION NMR | null | N. Koga;R. Tatsumi-Koga;G. Liu;R. Xiao;T.B. Acton;G.T. Montelione;D. Baker | "Principles for designing ideal protein structures", Nature, 491, 222-227 | 10.1038/nature11600|23135467|0006|0028-0836|NATUAS | UK | Solution nmr structure de novo designed pfk fold protein, northeast structural genomics consortium (nesg) target or250 | protein structure initiative;northeast structural genomics consortium (nesg);structural genomics;psi-biology;de novo protein | 2lnd(221);2mr5(57);2mr6(57);2l82(57);2l69(55);2lr0(52);2lrh(51);2lci(51) | null | null | null | 2lnd(221) | null | 2lnd(0.763199985) | 2pey(0.5343000293) | 3.30.1370.160;3.40.1350.10;3.30.43.10;3.40.50.790 | null |
2lxo | 2013-08-14 | other | id:A;type:U;source:unknown;length:44;seq_nat:GIINTLQKYYCRVRGAICHPVFCPRRYKQIGTCGLPGTKCCKKP;seq_unnat:GIINTLQKYYCRVRGAICHPVFCPRRYKQIGTCGLPGTKCCKKP | 4,982.063 | null | ||||| | SOLUTION NMR | null | B. Spudy;F.D. Sonnichsen;G.H. Waetzig;J. Grotzinger;S. Jung | "Identification of structural traits that increase the antimicrobial activity of a chimeric peptide of human beta-defensins 2 and 3", Biochem.Biophys.Res.Commun., 427, 207-211 | 10.1016/j.bbrc.2012.09.052|22995312|0146|0006-291X|BBRCA9 | US | Identification of the structural traits mediating the antimicrobial activity of a chimeric peptide of hbd2 and hbd3 | antimicrobial protein;antimicrobial peptide;designer peptide;de novo protein;antimicrobial protein, de novo protein | null | 1e4q(78);1fd4(78);1fd3(78);1fqq(78);8yd6(76);1kj6(56) | null | null | 2lxo(0) | 1e4q(78) | 2lxo(0) | 1kj6(0.5576999784) | 3.10.360.10 | null |
2lze | 2012-10-24 | other | id:A;type:D;source:synthetic construct;length:88;seq_nat:MGAPVPYPDPLEPRGGKHICAICGNNAEDYKHTDMDLTYTDRDYKNCESYHKCSDLCQYCRYQKDLAIHHQHHHGGSMGMSGSGTGY;seq_unnat:MGAPVPYPDPLEPRGGKHICAICGNNAEDYKHTDMDLTYTDRDYKNCESYHKCSDLCQYCRYQKDLAIHHQHHHGGSMGMSGSGTGY | 9,795.883 | null | ||||| | SOLUTION NMR | null | F.A. Chao;A. Morelli;J.C. Iii;L. Churchfield;L.N. Hagmann;L. Shi;L.R. Masterson;R. Sarangi;G. Veglia;B. Seelig | "Structure and dynamics of a primordial catalytic fold generated by in vitro evolution", Nat.Chem.Biol., 9, 81-83 | 10.1038/nchembio.1138|23222886||1552-4450| | US | Ligase 10c | ligase;de novo protein | null | null | null | null | 2lze(0) | 3e00(49) | 5sbi(0.2840999961) | 1a6y(0.4138999879) | null | null |
2mbl | 2013-11-13 | other | id:A;type:D;source:artificial gene;length:121;seq_nat:MSGKKVEVQVKITCNGKTYERTYQLYAVRDEELKEKLKKVLNERMDPIKKLGCKRVRISIRVKHSDAAEEKKEAKKFAAILNKVFAELGYNDSNVTWDGDTVTVEGQLEGVDLEHHHHHH;seq_unnat:MSGKKVEVQVKITCNGKTYERTYQLYAVRDEELKEKLKKVLNERMDPIKKLGCKRVRISIRVKHSDAAEEKKEAKKFAAILNKVFAELGYNDSNVTWDGDTVTVEGQLEGVDLEHHHHHH | 13,887.922 | null | ||||| | SOLUTION NMR | null | G. Liu;A.L. Zanghellini;K. Chan;R. Xiao;H. Janjua;S. Kogan;M. Maglaqui;C. Ciccosanti;T.B. Acton;G. Kornhaber;J.K. Everett;D. Baker;G.T. Montelione | To be published | |||| | null | Solution nmr structure of de novo designed top7 fold protein top7m13, northeast structural genomics consortium (nesg) target or33 | protein structure initiative;northeast structural genomics consortium (nesg);structural genomics;psi-biology;de novo protein | 2mbm(238);2n4e(118);2n41(118);2mra(94);4ky3(77);4kyz(77) | null | null | null | 2mbm(238) | null | 2mbm(0.7971000075) | 2jxt(0.4778999984) | 3.30.420.40;3.30.1710.10;3.30.420.270;6.20.250.30;3.10.20.10 | null |
2mbm | 2013-11-13 | other | id:A;type:D;source:artificial gene;length:121;seq_nat:MSGKKVEVQVKITCNGKTYERTYQLYAVRDEELKEKLKKVLNERMDPIKKLGCKRVRISIRVKHSDAAEEKKEAKKFAAILNKVFAELGYNDSNVTWDGDTVTVEGQLEGVDLEHHHHHH;seq_unnat:MSGKKVEVQVKITCNGKTYERTYQLYAVRDEELKEKLKKVLNERMDPIKKLGCKRVRISIRVKHSDAAEEKKEAKKFAAILNKVFAELGYNDSNVTWDGDTVTVEGQLEGVDLEHHHHHH | 13,887.922 | null | ||||| | SOLUTION NMR | null | G. Liu;A.L. Zanghellini;K. Chan;R. Xiao;H. Janjua;S. Kogan;M. Maglaqui;C. Ciccosanti;T.B. Acton;G. Kornhaber;J.K. Everett;D. Baker;G.T. Montelione | To be published | |||| | null | Solution nmr structure of de novo designed top7 fold protein top7m13, northeast structural genomics consortium (nesg) target or33 | protein structure initiative;northeast structural genomics consortium (nesg);structural genomics;psi-biology;de novo protein | 2mbl(238);2n4e(118);2n41(118);2mra(94);4ky3(77);4kyz(77) | null | null | null | 2mbl(238) | null | 2mbl(0.810100019) | 3mmp(0.4314999878) | 3.30.420.40;3.30.1710.10;3.30.420.270;6.20.250.30;3.10.20.10 | null |
2mdv | 2014-10-01 | other | id:A,B;type:U;source:unknown;length:38;seq_nat:RWLCIWLSDQTLEDLEKMARREGLSKSEMINVALQHYK;seq_unnat:RWLCIWLSDQTLEDLEKMARREGLSKSEMINVALQHYK | 4,599.339 | null | ||||| | SOLUTION NMR | null | B.L. Kier;W. Sheffler;D. Baker | To be published | |||| | null | Nmr structure of beta alpha alpha 38 | miniprotein;rhh1 superfamily;de novo protein;hub-linked | null | null | null | null | 2mdv(0) | 2cpg(46) | 4yxy(0.7437999845) | 1ea4(0.8360000253) | null | null |
2mdw | 2014-10-01 | other | id:A,B;type:U;source:unknown;length:27;seq_nat:KLPPGWEKRCFYFNRITGKRQFERPSD;seq_unnat:KLPPGWEKRCFYFNRITGKRQFERPSD | 3,363.869 | null | ||||| | SOLUTION NMR | null | B.L. Kier;W. Sheffler;D. Baker | To be published | |||| | null | Nmr structure of a strand-swapped dimer of the ww domain | miniprotein;de novo protein;hub-linked;disulfide | null | null | null | null | 8qtq(31) | 2m9e(46) | 1ymz(0.8011000156) | 4gwv(0.8147000074) | null | null |
2mi7 | 2014-08-20 | other | id:A;type:D;source:synthetic construct;length:67;seq_nat:GSRVKALEEKVKALEEKVKALGGGGRIEELKKKYEELKKKIEELGGGGEVKKVEEEVKKLEEEIKKL;seq_unnat:GSRVKALEEKVKALEEKVKALGGGGRIEELKKKYEELKKKIEELGGGGEVKKVEEEVKKLEEEIKKL | 7,539.863 | null | ||||| | SOLUTION NMR | null | S.D. Glover;C. Jorge;L. Liang;K.G. Valentine;L. Hammarstrom;C. Tommos | "Photochemical tyrosine oxidation in the structurally well-defined alpha 3Y protein: proton-coupled electron transfer and a long-lived tyrosine radical", J.Am.Chem.Soc., 136, 14039-14051 | 10.1021/ja503348d|25121576|0004|0002-7863|JACSAT | US | Solution nmr structure of alpha3y | tyrosine radical;redox protein;proton-coupled electron transfer;de novo protein;three-helix bundle | null | 2lxy(117) | null | null | 2mi7(0) | 2lxy(117) | 1lq7(0.7074000239) | 2lxy(0.7526999712) | 1.20.81.20;1.20.1440.140;1.20.5.420;1.20.1270.430;1.20.1270.10;1.10.8.380;1.10.287.410;1.10.12.40;1.10.246.30;1.20.1270.20;1.20.1270.150;1.20.1270.90;1.10.8.1170;1.10.8.1120;1.20.1270.110;1.20.1270.350;1.20.5.440 | null |
2mlb | 2014-10-29 | other | id:A;type:D;source:synthetic;length:79;seq_nat:MDTINITLPDGKTLTLTVTPEFTVKELAEEIARRLGLSPEDIKLTHNGKTLDPSLTLAEYGITPGSTITLEIKKKGGLE;seq_unnat:MDTINITLPDGKTLTLTVTPEFTVKELAEEIARRLGLSPEDIKLTHNGKTLDPSLTLAEYGITPGSTITLEIKKKGGLE | 8,559.83 | null | ||||| | SOLUTION NMR | null | P. Xiong;M. Wang;X. Zhou;T. Zhang;J. Zhang;Q. Chen;H. Liu | "Protein design with a comprehensive statistical energy function and boosted by experimental selection for foldability", Nat Commun, 5, 5330-5330 | 10.1038/ncomms6330|25345468||2041-1723| | UK | Nmr solution structure of a computational designed protein based on template of human erythrocytic ubiquitin | statistical energy function;protein design;de novo protein;ubiquitin | null | 8vvr(51);8vvu(51);8vvq(51);8vvp(51);8vvs(51);4ksl(50);3u30(50) | null | null | 9lqk(49) | 8vvr(51) | 9lqk(0.7985000014) | 3l10(0.8131999969) | 3.10.20.90;2.40.240.130;3.10.20.710;3.10.20.270;3.10.20.10;3.10.350.10;3.10.20.540;6.10.140.550;3.10.20.620;3.10.20.30;3.10.20.230;3.10.20.600 | null |
2mn4 | 2014-10-29 | other | id:A;type:D;source:synthetic;length:107;seq_nat:HHHHHHMTPEQREFLPEILAEIIANLDPTKILEELLRRGLLTPAELQEVLDLKTPEEQAKKLIDFILKLSPADVQARINVLRAHGYQALADKLNKYLTLEHHHHHH;seq_unnat:HHHHHHMTPEQREFLPEILAEIIANLDPTKILEELLRRGLLTPAELQEVLDLKTPEEQAKKLIDFILKLSPADVQARINVLRAHGYQALADKLNKYLTLEHHHHHH | 12,403.268 | P 1 | 1.000|1.000|1.000|90.00|90.00|90.00 | SOLUTION NMR | null | P. Xiong;M. Wang;X. Zhou;T. Zhang;J. Zhang;Q. Chen;H. Liu | "Protein design with a comprehensive statistical energy function and boosted by experimental selection for foldability", Nat Commun, 5, 5330-5330 | 10.1038/ncomms6330|25345468||2041-1723| | UK | Nmr solution structure of a computational designed protein based on structure template 1cy5 | statistical energy function;protein design;protein evolution;alpha-helical greek;de novo protein | 6jcc(172) | null | null | null | 6jcc(172) | null | 6jcc(0.6599000096) | 3ygs(0.6916999817) | 1.10.533.10;1.10.506.20 | null |
2mq8 | 2014-08-20 | other | id:A;type:D;source:artificial gene;length:113;seq_nat:MLTVEVEVKITADDENKAEEIVKRVIDEVEREVQKQYPNATITRTLTRDDGTVELRIKVKADTEEKAKSIIKLIEERIEEELRKRDPNATITRTVRTEVGSSWSLEHHHHHH;seq_unnat:MLTVEVEVKITADDENKAEEIVKRVIDEVEREVQKQYPNATITRTLTRDDGTVELRIKVKADTEEKAKSIIKLIEERIEEELRKRDPNATITRTVRTEVGSSWSLEHHHHHH | 13,116.759 | null | ||||| | SOLUTION NMR | null | Y.R. Lin;N. Koga;R. Tatsumi-Koga;G. Liu;A.F. Clouser;G.T. Montelione;D. Baker | "Control over overall shape and size in de novo designed proteins", Proc.Natl.Acad.Sci.USA, 112, E5478-E5485 | 10.1073/pnas.1509508112|26396255|0040|0027-8424|PNASA6 | US | Solution nmr structure of de novo designed protein lfr1 1 with ferredoxin fold, northeast structural genomics consortium (nesg) target or414 | northeast structural genomics consortium;protein structure initiative;structural genomics;psi-biology;de novo protein;nesg | 2n76(207);2n2u(53) | null | null | null | 2n76(207) | null | 2n76(0.850300014) | 4pxe(0.6800000072) | 3.30.70.2860;3.30.70.380;3.30.70.1430;3.30.70.2770;3.30.70.870;3.30.1370.10;3.30.70.250;3.30.1360.210;3.30.70.600;3.30.70.3250;3.30.70.1380;3.30.70.1440;3.30.70.340;3.30.70.1130;3.30.70.330;3.30.70.2750;3.30.70.1030;3.30.70.2370;3.30.70.360;3.30.70.1320;3.30.310.50;3.30.70.420;3.30.70.2690;3.30.70.100;3.30.70.120;3.30.... | null |
2mr5 | 2014-09-17 | other | id:A;type:D;source:artificial gene;length:137;seq_nat:MGTVVIVVSNDERILEELLEVVLKSDPNVKTVRTDDKEKVKEEIEKARKQGRPIVIFIRGAYEEVVRDIVEYAQKEGLRVLVIKVAQDQELLERFYEQLKKDGVDVRVTDNEDEAKKRLKELLEKVGSLEHHHHHH;seq_unnat:MGTVVIVVSNDERILEELLEVVLKSDPNVKTVRTDDKEKVKEEIEKARKQGRPIVIFIRGAYEEVVRDIVEYAQKEGLRVLVIKVAQDQELLERFYEQLKKDGVDVRVTDNEDEAKKRL... | 15,904.214 | null | ||||| | SOLUTION NMR | null | S. Pulavarti;L. Nivon;M. Maglaqui;H. Janjua;L. Mao;R. Xiao;G. Kornhaber;D. Baker;G. Montelione;T. Szyperski | To be published | |||| | null | Solution nmr structure of de novo designed protein, northeast structural genomics consortium (nesg) target or457 | northeast structural genomics consortium;protein structure initiative;structural genomics;psi-biology;de novo protein;nesg | 5gaj(227);2mr6(174);2l69(84);2l82(69);2lvb(64);2lnd(64);2lr0(64);2lci(60);2lrh(59);2lv8(57);2kpo(57);6wvs(53) | 4j29(227) | null | null | 5gaj(227) | 4j29(227) | 5gaj(0.7265999913) | 4j29(0.5503000021) | 3.40.1010.10;3.40.50.9100;3.40.50.10580;3.40.50.10350;3.40.50.11400;3.40.50.10700;3.40.50.720;3.40.50.11130;3.40.50.10330;3.40.50.2300;3.40.50.1970;3.40.50.360;3.40.50.10140;3.40.50.1220;3.40.50.450;3.40.50.10190;3.40.50.300;3.40.50.10740;3.40.50.10090;3.40.50.1980;3.40.50.11230;3.40.50.20;3.40.50.1400;3.40.50.510;3.40... | null |
2mr6 | 2014-08-06 | other | id:A;type:D;source:artificial gene;length:137;seq_nat:MGVVILVLTGDERIAEELRKEVQKHDPNVKTVPTKDKEKVKEEIEKARKQGRPIVVFVRGGDDERAKDIAEYAQKEGLRVIVIIVSQDEEALRKGYEDKKKKGYDVYTSRNEDEAKKKLKEALEKSGSLEHHHHHH;seq_unnat:MGVVILVLTGDERIAEELRKEVQKHDPNVKTVPTKDKEKVKEEIEKARKQGRPIVVFVRGGDDERAKDIAEYAQKEGLRVIVIIVSQDEEALRKGYEDKKKKGYDVYTSRNEDEAKKKL... | 15,712.907 | null | ||||| | SOLUTION NMR | null | X. Xu;L. Nivon;J.F. Federizon;M. Maglaqui;H. Janjua;L. Mao;R. Xiao;G. Kornhaber;D. Baker;G.T. Montelione;T. Szyperski | To be published | |||| | null | Solution nmr structure of de novo designed protein, northeast structural genomics consortium (nesg) target or462 | northeast structural genomics consortium;protein structure initiative;structural genomics;psi-biology;de novo protein;nesg | 2mr5(174);5gaj(164);2l82(66);2lvb(64);2lnd(64) | 4j29(164) | null | null | 2mr5(174) | 4j29(164) | 5gaj(0.7184000015) | 4j29(0.5296999812) | 6.10.140.2210;3.30.43.10 | null |
2mra | 2014-09-17 | other | id:A;type:D;source:artificial gene;length:118;seq_nat:MAGKELRVEIKIDCGNDDKETTYDLYFSKAEEAKELLKKVAEKAADKIKKQGCKRVKIRFEKKGLDDDARKKAKKWALEVANKIANELGAKQSTTTTDGDTFEVEVILELEHHHHHH;seq_unnat:MAGKELRVEIKIDCGNDDKETTYDLYFSKAEEAKELLKKVAEKAADKIKKQGCKRVKIRFEKKGLDDDARKKAKKWALEVANKIANELGAKQSTTTTDGDTFEVEVILELEHHHHHH | 13,406.32 | null | ||||| | SOLUTION NMR | null | S.V.S.R.K. Pulavarti;Y. Kipnis;D. Sukumaran;M. Maglaqui;H. Janjua;L. Mao;R. Xiao;G. Kornhaber;D. Baker;G.T. Montelione;T. Szyperski | To be published | |||| | null | Solution nmr structure of de novo designed protein, northeast structural genomics consortium (nesg) target or459 | northeast structural genomics consortium;protein structure initiative;structural genomics;psi-biology;de novo protein;nesg | 2mbl(94);2mbm(94) | null | null | null | 2mbl(94) | null | 1qys(0.5360999703) | 3ova(0.4580000043) | 3.30.420.40;3.30.110.20;3.40.630.30;3.30.1710.10;3.30.110.10 | null |
2mtl | 2014-10-29 | other | id:A;type:D;source:Artificial gene;length:89;seq_nat:MGEMDIRFRGDDLEALEKALKEMIRQARKFAGTVTYTLDGNDLEIRITGVPEQVRKELAKEAERLAKEFNITVTYTIRGSLEHHHHHH;seq_unnat:MGEMDIRFRGDDLEALEKALKEMIRQARKFAGTVTYTLDGNDLEIRITGVPEQVRKELAKEAERLAKEFNITVTYTIRGSLEHHHHHH | 10,233.644 | null | ||||| | SOLUTION NMR | null | G. Liu;N. Koga;R. Koga;R. Xiao;K. Hamilton;C. Ciccosanti;S. Sahdev;E. Kohan;T.B. Acton;G. Kornhaber;J.K. Everett;D. Baker;G.T. Montelione | To be published | |||| | null | Solution nmr structure of de novo designed fr55, northeast structural genomics consortium (nesg) target or109 | northeast structural genomics consortium;protein structure initiative;structural genomics;psi-biology;de novo protein;nesg | 2kl8(160);4ky3(149);4kyz(149);4pww(143);4nez(135);4ney(132);4rjv(130);5cw9(128);9qud(113);9qui(113);9quc(113);6zv9(113);6wxp(113);6wxo(113);9qul(111);9quo(111);9qup(54) | 4hhu(136) | null | null | 2kl8(160) | 4hhu(136) | 4nez(0.8723999858) | 4hhu(0.8154000044) | 3.30.70.790;3.30.70.2860;3.30.70.2250;3.30.70.1430;3.30.70.80;3.30.70.2810;3.30.70.870;3.30.70.1280;3.30.1370.10;3.30.70.1520;3.30.70.250;3.30.70.860;3.30.70.240;3.30.70.600;3.30.70.2280;3.30.70.1440;3.30.70.1380;3.30.70.1750;3.30.70.340;3.30.70.1130;3.30.70.330;3.30.70.2750;3.30.70.1940;3.30.70.1170;3.30.70.1200;3.30.... | null |
2muz | 2014-12-24 | other | id:A,B,C,D;type:U;source:unknown;length:26;seq_nat:YYKEIAHALFSALFALSELYIAVRYX;seq_unnat:YYKEIAHALFSAL(PFF)ALSELYIAVRY(NH2) | 2,971.427 | null | ||||| | SOLUTION NMR | null | N.H. Joh;T. Wang;M.P. Bhate;R. Acharya;Y. Wu;M. Grabe;M. Hong;G. Grigoryan;W.F. DeGrado | "De novo design of a transmembrane Zn2+-transporting four-helix bundle", Science, 346, 1520-1524 | 10.1126/science.1261172|25525248|0038|0036-8075|SCIEAS | US | Ssnmr structure of a designed rocker protein | rocker protein;de novo protein;de novo desgin;ssnmr | 4p6k(50);4p6j(50);4p6l(50) | null | 4p6l(0.9909999967);4p6j(0.9927999973);4p6k(0.9826999903) | null | 4p6k(50) | null | 4p6j(0.9927999973) | null | 6.10.250.770;1.20.5.420;1.20.5.2620;1.20.5.1450;6.10.250.500;6.10.250.2150;6.10.250.200;6.10.250.880;1.20.5.3960;6.10.250.2060;6.10.250.1090;6.10.250.1210;6.10.250.1020;6.10.250.160;6.10.250.490;1.20.5.110;1.20.5.250;6.10.250.1290;6.10.250.1200;6.10.250.30;1.20.5.460;1.20.5.740;1.20.5.170;1.20.5.100;6.10.250.2270;1.20.... | null |
2n1e | 2015-07-29 | other | id:A,B,C,D,E,F,G,H;type:U;source:unknown;length:21;seq_nat:VKVKVKVKVPPTKVKVKVKVX;seq_unnat:VKVKVKVKV(DPR)PTKVKVKVKV(NH2) | 2,236.972 | null | ||||| | SOLID-STATE NMR | null | K. Nagy-Smith;E. Moore;J. Schneider;R. Tycko | "Molecular structure of monomorphic peptide fibrils within a kinetically trapped hydrogel network", Proc.Natl.Acad.Sci.USA, 112, 9816-9821 | 10.1073/pnas.1509313112|26216960|0040|0027-8424|PNASA6 | US | Max1 peptide fibril | amyloid-like;cross-beta;protein fibril;biomaterials;hydrogel;designed peptide | null | null | null | null | null | null | 1qys(0.9376999736) | null | null | null |
2n2t | 2015-09-16 | other | id:A;type:D;source:synthetic construct;length:85;seq_nat:MGQWQIKIYSENEREFRELIERLEEERPSVQYTETTRNGRRQLTIRSNDKNEVDRILEEVRRKVPNARVRETETGSLEHHHHHH;seq_unnat:MGQWQIKIYSENEREFRELIERLEEERPSVQYTETTRNGRRQLTIRSNDKNEVDRILEEVRRKVPNARVRETETGSLEHHHHHH | 10,337.424 | null | ||||| | SOLUTION NMR | null | G. Liu;Y. Lin;N. Koga;R. Koga;R. Xiao;H. Janjua;K. Hamilton;T.B. Acton;G. Kornhaber;J.K. Everett;D. Baker;G.T. Montelione | To be published | |||| | null | Solution nmr structure of de novo designed protein (fda_60), northeast structural genomics consortium (nesg) target or303 | unknown function;protein structure initiative;protein nmr;northeast structural genomics consortium (nesg);structural genomics;psi-biology;unknown function, structural genomics;target or303 | null | null | null | null | 9dia(38) | null | 8tcf(0.6816999912) | 3dfe(0.6603000164) | 3.30.70.1140;3.30.70.790;3.30.70.2860;3.30.70.2250;3.30.70.80;3.30.70.2810;3.30.70.870;3.30.70.1280;3.30.1370.10;3.30.70.1520;3.30.70.1400;3.30.70.250;3.30.70.860;3.30.70.240;3.30.70.600;3.30.70.2280;3.30.70.1750;3.30.70.340;3.30.70.1130;3.30.70.330;3.30.70.2750;3.30.70.1170;3.30.70.1200;3.30.70.2070;3.30.70.2690;3.30.... | null |
2n2u | 2015-09-16 | other | id:A;type:D;source:Synthetic construct;length:77;seq_nat:MVDLKIDVSDDEEAEKIIREIREQWPKATVTRTNGDIKLDAQTEKEAEKMEKAVKKVKPNATIRKTGGSLEHHHHHH;seq_unnat:MVDLKIDVSDDEEAEKIIREIREQWPKATVTRTNGDIKLDAQTEKEAEKMEKAVKKVKPNATIRKTGGSLEHHHHHH | 8,898.082 | null | ||||| | SOLUTION NMR | null | G. Liu;Y. Lin;N. Koga;R. Koga;R. Xiao;H. Janjua;K. Hamilton;K. Pederson;T.B. Acton;G. Kornhaber;J.K. Everett;D. Baker;G.T. Montelione | To be published | |||| | null | Solution nmr structure of de novo designed ferredoxin fold protein sfr3, northeast structural genomics consortium (nesg) target or358 | target or358;unknown function;protein structure initiative;protein nmr;northeast structural genomics consortium (nesg);structural genomics;psi-biology;unknown function, structural genomics | 2n76(51);2mq8(51) | null | null | null | 2n76(51) | null | 7lmx(0.6862000227) | 1gmu(0.6460999846) | 3.30.70.1140;3.30.70.790;3.30.70.2860;3.30.70.2250;3.30.70.80;3.30.70.20;3.30.70.2810;3.30.70.870;3.30.70.1280;3.30.70.1520;3.30.70.250;3.30.70.860;3.30.70.2350;3.30.70.930;3.30.70.240;3.30.70.600;3.30.70.2280;3.30.70.1750;3.30.70.1130;3.30.70.330;3.30.70.2080;3.30.70.1940;3.30.70.980;3.30.70.1170;3.30.70.2430;3.30.70.... | null |
2n35 | 2015-09-02 | other | id:A;type:D;source:synthetic construct;length:52;seq_nat:GTIDEWLLKEAKEKAIEELKKAGITSDYYFDLINKAKTVEGVNALKDEILKA;seq_unnat:GTIDEWLLKEAKEKAIEELKKAGITSDYYFDLINKAKTVEGVNALKDEILKA | 5,863.725 | null | ||||| | SOLUTION NMR | null | S.A. Jacobs;A.C. Gibbs;M. Conk;F. Yi;D. Maguire;C. Kane;K.T. O'Neil | "Fusion to a highly stable consensus albumin binding domain allows for tunable pharmacokinetics", Protein Eng.Des.Sel., 28, 385-393 | 10.1093/protein/gzv040|26275855||1741-0126| | UK | Fusion to a highly stable consensus albumin binding domain allows for tunable pharmacokinetics | de novo protein;albumin binding domain;three-helix bundle | null | 1gab(85);1prb(85);1tf0(85);2vdb(85);2j5y(85);2fs1(59);1gjs(51);1gjt(51) | null | null | 2jws(48) | 1gab(85) | 2jws(0.6498000026) | 2j5y(0.8483999968) | 1.10.10.10;1.20.5.420;1.10.8.40;1.20.5.4730;1.10.8.560;1.10.1200.60;1.10.8.60;6.10.250.980;1.10.8.10 | null |
2n3z | 2015-09-16 | other | id:A;type:D;source:Synthetic;length:100;seq_nat:MGRLVVVVTSEQLKEEVRKKFPQVEVRLVTTEEDAKQVIKEIQKKGVQKVVLVGVSEKLLQKIKQEANVQVYRVTSNDELEQVVKDVKGSGLEHHHHHH;seq_unnat:MGRLVVVVTSEQLKEEVRKKFPQVEVRLVTTEEDAKQVIKEIQKKGVQKVVLVGVSEKLLQKIKQEANVQVYRVTSNDELEQVVKDVKGSGLEHHHHHH | 11,377.153 | null | ||||| | SOLUTION NMR | null | G. Liu;Y. Lin;N. Koga;R. Koga;R. Xiao;H. Janjua;K. Pederson;T.B. Acton;G. Kornhaber;J.K. Everett;D. Baker;G.T. Montelione | To be published | |||| | null | Solution nmr structure of de novo designed protein, rossmann2x2 fold, northeast structural genomics consortium (nesg) target or446 | protein structure initiative;target or446;protein nmr;northeast structural genomics consortium (nesg);structural genomics;psi-biology;de novo protein;structural genomics, de novo protein | 2n75(183);6c2u(66);6c2v(66) | null | 2n75(1) | null | 2n75(183) | null | 2n75(1) | 5abp(0.5695999861) | 3.40.50.10580;3.40.50.11420;3.40.50.10700;3.40.50.1860;3.40.50.720;3.40.50.2300;3.40.50.12570;3.40.50.800;3.40.50.12090;3.40.50.10190;3.40.50.10090;3.40.50.11060;3.40.50.1980;3.40.50.20;3.40.50.10440;3.40.50.510;3.40.50.790;3.40.50.1390;3.40.50.10800 | null |
2n41 | 2016-03-02 | other | id:A;type:D;source:Synthetic;length:107;seq_nat:MHHHHHHRSGDIQVQNNNTCNGKTFDYTYTVTTESELQKVLNELKDYIKKQGCKRSRTSITARTKKEAEKFAAILIKVYAELGYNDINVTWDGDTVTVEGQLEGVD;seq_unnat:MHHHHHHRSGDIQVQNNNTCNGKTFDYTYTVTTESELQKVLNELKDYIKKQGCKRSRTSITARTKKEAEKFAAILIKVYAELGYNDINVTWDGDTVTVEGQLEGVD | 12,146.514 | null | ||||| | SOLUTION NMR | null | G. Liu;K. Chan;B. Basanta;R. Xiao;H. Janjua;S. Kogan;M. Maglaqui;C. Ciccosanti;T.B. Acton;G. Kornhaber;J.K. Everett;D. Baker;G.T. Montelione | To be published | |||| | null | Solution nmr structure of de novo designed protein top7nnstycc, northeast structural genomics consortium (nesg) target or34 | protein structure initiative;protein nmr;northeast structural genomics consortium (nesg);target or34;structural genomics;psi-biology;de novo protein;structural genomics, de novo protein | 2n4e(218);4ky3(121);4kyz(121);2mbl(116);2mbm(116) | null | null | null | 2n4e(218) | null | 1qys(0.7124000192) | 1vkw(0.4973999858) | 3.30.420.40;3.30.160.110;3.30.70.2060;3.40.630.30;3.30.1710.10;3.30.750.24;3.30.110.10 | null |
2n4e | 2015-12-09 | other | id:A;type:D;source:Synthetic;length:107;seq_nat:MHHHHHHRSGDIQVQNNNTCNGKTFDYTYTVTTESELQKVLNELKDYIKKQGCKRSRTSITARTKKEAEKFAAILIKVYAELGYNDINVTWDGDTVTVEGQLEGVD;seq_unnat:MHHHHHHRSGDIQVQNNNTCNGKTFDYTYTVTTESELQKVLNELKDYIKKQGCKRSRTSITARTKKEAEKFAAILIKVYAELGYNDINVTWDGDTVTVEGQLEGVD | 12,146.514 | null | ||||| | SOLUTION NMR | null | G. Liu;K. Chan;B. Basanta;R. Xiao;H. Janjua;S. Kogan;M. Maglaqui;C. Ciccosanti;T.B. Acton;G. Kornhaber;J.K. Everett;D. Baker;G.T. Montelione | To be published | |||| | null | Solution nmr structure of de novo designed protein top7nnstycc, northeast structural genomics consortium (nesg) target or34 | protein structure initiative;protein nmr;northeast structural genomics consortium (nesg);target or34;structural genomics;psi-biology;top 7 fold;de novo protein;structural genomics, de novo protein | 2n41(218);4ky3(121);4kyz(121);2mbl(116);2mbm(116) | null | null | null | 2n41(218) | null | 1qys(0.7321000099) | 1usm(0.4927999973) | 3.30.420.40;3.30.110.20;3.40.630.30;3.30.1370.110;3.30.1710.10;3.30.110.10 | null |
2n4n | 2015-10-28 | other | id:A;type:U;source:unknown;length:25;seq_nat:XERFYEKXPVQKFIRVXGVTIREKX;seq_unnat:(ACE)ERFYEK(4G6)(DPR)VQKFIRV(4FU)GVTIREK(NH2) | 2,877.45 | null | ||||| | SOLUTION NMR | null | V.M. Kung;G. Cornilescu;S.H. Gellman | "Impact of Strand Number on Parallel beta-Sheet Stability", Angew.Chem.Int.Ed.Engl., 54, 14336-14339 | 10.1002/anie.201506448|26457984|9999|1433-7851| | GE | Nmr structure for a 3-stranded parallel beta-sheet | de novo protein | null | null | null | null | 2n4n(0) | null | 2n6h(0.5296000242) | null | null | null |
2n63 | 2016-03-23 | other | id:A;type:U;source:unknown;length:16;seq_nat:VARGWKRKCPLFGKGG;seq_unnat:VARGWKRKCPLFGKGG | 1,765.157 | P 1 | 1.000|1.000|1.000|90.00|90.00|90.00 | SOLUTION NMR | null | A. Datta;P. Kundu;A. Bhunia | "Designing potent antimicrobial peptides by disulphide linked dimerization and N-terminal lipidation to increase antimicrobial activity and membrane perturbation: Structural insights into lipopolysaccharide binding", J Colloid Interface Sci, 461, 335-345 | 10.1016/j.jcis.2015.09.036|26407061||0021-9797| | US | Structure of c4vg16krkp | antimicrobial protein;designed antimicrobial peptide;lipidated peptide;de novo protein;de novo protein, antimicrobial protein | null | null | null | null | 2n65(42) | 2mwl(42) | 5wrx(0.4332999885) | null | null | null |
2n65 | 2016-03-23 | other | id:A,B;type:U;source:unknown;length:16;seq_nat:VARGWKRKCPLFGKGG;seq_unnat:VARGWKRKCPLFGKGG | 1,765.157 | null | ||||| | SOLUTION NMR | null | A. Datta;P. Kundu;A. Bhunia | "Designing potent antimicrobial peptides by disulphide linked dimerization and N-terminal lipidation to increase antimicrobial activity and membrane perturbation: Structural insights into lipopolysaccharide binding", J Colloid Interface Sci, 461, 335-345 | 10.1016/j.jcis.2015.09.036|26407061||0021-9797| | US | Disulphide linked homodimer of designed antimicrobial peptide vg16krkp | antimicrobial protein;designed antimicrobial peptide;disulphide linked vg16krkp homodimer;de novo protein;de novo protein, antimicrobial protein | null | null | null | null | 2n63(42) | 2mwl(42) | 5wrx(0.6290000081) | 2mwl(0.6359999776) | null | null |
2n6h | 2015-10-28 | other | id:A;type:U;source:unknown;length:16;seq_nat:XERFYEKXPVQKFIRX;seq_unnat:(ACE)ERFYEK(4G6)(DPR)VQKFIR(ACE) | 1,866.255 | null | ||||| | SOLUTION NMR | null | V.M. Kung;G. Cornilescu;S.H. Gellman | "Impact of Strand Number on Parallel beta-Sheet Stability", Angew.Chem.Int.Ed.Engl., 54, 14336-14339 | 10.1002/anie.201506448|26457984|9999|1433-7851| | GE | Nmr structure for a 2-stranded parallel beta-sheet | de novo protein | null | null | null | null | null | null | 2n4n(0.7767999768) | null | null | null |
2n6i | 2015-10-28 | other | id:A;type:U;source:unknown;length:16;seq_nat:XQKFIRVXGVTIREKX;seq_unnat:(NH2)QKFIRV(4FU)GVTIREK(NH2) | 1,728.09 | null | ||||| | SOLUTION NMR | null | V.M. Kung;G. Cornilescu;S.H. Gellman | "Impact of Strand Number on Parallel beta-Sheet Stability", Angew.Chem.Int.Ed.Engl., 54, 14336-14339 | 10.1002/anie.201506448|26457984|9999|1433-7851| | GE | Nmr structure for a 2-stranded parallel beta-sheet | de novo protein | null | null | null | null | null | null | 2n4n(0.6973999739) | null | null | null |
2n75 | 2016-01-27 | other | id:A;type:D;source:synthetic construct;length:100;seq_nat:MGRLVVVVTSEQLKEEVRKKFPQVEVRLVTTEEDAKQVIKEIQKKGVQKVVLVGVSEKLLQKIKQEANVQVYRVTSNDELEQVVKDVKGSGLEHHHHHH;seq_unnat:MGRLVVVVTSEQLKEEVRKKFPQVEVRLVTTEEDAKQVIKEIQKKGVQKVVLVGVSEKLLQKIKQEANVQVYRVTSNDELEQVVKDVKGSGLEHHHHHH | 11,377.153 | null | ||||| | SOLUTION NMR | null | G. Liu;Y. Lin;N. Koga;R. Koga;R. Xiao;H. Janjua;K. Pederson;T.B. Acton;G. Kornhaber;J.K. Everett;D. Baker;G.T. Montelione | To be published | |||| | null | Solution nmr structure of de novo designed protein, rossmann2x2 fold, northeast structural genomics consortium (nesg) target or446 | northeast structural genomics consortium;protein structure initiative;structural genomics;psi-biology;de novo protein;nesg | 2n3z(183);6c2u(66);6c2v(66) | null | 2n3z(1) | null | 2n3z(183) | null | 2n3z(1) | 5abp(0.5695999861) | 3.40.50.10580;3.40.50.11420;3.40.50.10700;3.40.50.1860;3.40.50.720;3.40.50.2300;3.40.50.12570;3.40.50.800;3.40.50.12090;3.40.50.10190;3.40.50.10090;3.40.50.11060;3.40.50.1980;3.40.50.20;3.40.50.10440;3.40.50.510;3.40.50.790;3.40.50.1390;3.40.50.10800 | null |
2n76 | 2016-01-27 | other | id:A;type:D;source:synthetic construct;length:113;seq_nat:MLTVEVEVKITADDENKAEEIVKRVIDEVEREVQKQYPNATITRTLTRDDGTVELRIKVKADTEEKAKSIIKLIEERIEEELRKRDPNATITRTVRTEVGSSWSLEHHHHHH;seq_unnat:MLTVEVEVKITADDENKAEEIVKRVIDEVEREVQKQYPNATITRTLTRDDGTVELRIKVKADTEEKAKSIIKLIEERIEEELRKRDPNATITRTVRTEVGSSWSLEHHHHHH | 13,116.759 | null | ||||| | SOLUTION NMR | null | G. Liu;Y. Lin;N. Koga;R. Koga;R. Xiao;H. Janjua;K. Pederson;T.B. Acton;G. Kornhaber;J.K. Everett;D. Baker;G.T. Montelione | To be published | |||| | null | Solution nmr structure of de novo designed protein lfr1 1 with ferredoxin fold, northeast structural genomics consortium (nesg) target or414 | northeast structural genomics consortium;protein structure initiative;structural genomics;psi-biology;de novo protein;nesg | 2mq8(207);2n2u(53) | null | null | null | 2mq8(207) | null | 2mq8(0.861100018) | 4pxd(0.6396999955) | 3.30.70.2860;3.30.70.380;3.30.70.1430;3.30.70.2770;3.30.70.870;3.30.1370.10;3.30.70.250;3.30.1360.210;3.30.70.600;3.30.70.3250;3.30.70.1380;3.30.70.1440;3.30.70.340;3.30.70.1130;3.30.70.330;3.30.70.2750;3.30.70.1030;3.30.70.2370;3.30.70.360;3.30.70.1320;3.30.310.50;3.30.70.420;3.30.70.2690;3.30.70.100;3.30.70.120;3.30.... | null |
2n8d | 2017-01-18 | other | id:A;type:U;source:unknown;length:21;seq_nat:WDPYFAGVKKLTKAILAVRAX;seq_unnat:WDPYFAGVKKLTKAILAVRA(NH2) | 2,249.718 | null | ||||| | SOLUTION NMR | null | M. Pillong;J.A. Hiss;P. Schneider;Y.C. Lin;G. Posselt;B. Pfeiffer;M. Blatter;A.T. Muller;S. Bachler;C.S. Neuhaus;P.S. Dittrich;K.H. Altmann;S. Wessler;G. Schneider | "Rational Design of Membrane-Pore-Forming Peptides", Small, 13 | 10.1002/smll.201701316|28799716||1613-6829| | DE | In silico designed antimicrobial peptide lavracin | de novo protein;de novo protein, antimicrobial peptide;antimicrobial peptide | null | null | null | null | 2n8d(0) | null | 2n8d(0) | null | 6.10.250.300;4.10.180.10 | null |
2n8i | 2016-01-20 | other | id:A;type:D;source:synthetic construct;length:101;seq_nat:GGSPDENIAKFEKAYKKAEELNQGELMGRALYNIGLEKNKMGKVKEAIEYFLRAKKVFDAEHDTDGARRAAKSLSEAYQKVEGSGDKGKIFQKEGESILE;seq_unnat:GGSPDENIAKFEKAYKKAEELNQGELMGRALYNIGLEKNKMGKVKEAIEYFLRAKKVFDAEHDTDGARRAAKSLSEAYQKVEGSGDKGKIFQKEGESILE | 11,148.562 | null | ||||| | SOLUTION NMR | null | T.M. Jacobs;B. Williams;T. Williams;X. Xu;A. Eletsky;J.F. Federizon;T. Szyperski;B. Kuhlman | "Design of structurally distinct proteins using strategies inspired by evolution", Science, 352, 687-690 | 10.1126/science.aad8036|27151863|0038|0036-8075|SCIEAS | US | Solution nmr structure of designed protein da05, northeast structural genomics consortium (nesg) target or626 | northeast structural genomics consortium;psi-biology;designed protein;de novo protein;nesg | 2n8w(125) | 4i9c(59);4i9e(59);3ulq(59) | null | null | 2n8w(125) | 4i9c(59) | 2n8w(0.7329999804) | 3sf4(0.814899981) | 1.25.40.290;1.25.40.440;1.20.58.80;1.20.58.1280;1.25.40.970;1.25.40.10;1.10.3450.10;1.25.40.850 | null |
2n8w | 2015-11-25 | other | id:A;type:D;source:synthetic construct;length:105;seq_nat:ADENIAKFEKAYKKAEELNQGELMGRALYNIGLEKNKMGKAREAAEYFFRAAIVFYKEHDTDGLRRAAKSLKEAITAIPEEEGRKEAKEMAKKAEEWLQAEQNN;seq_unnat:ADENIAKFEKAYKKAEELNQGELMGRALYNIGLEKNKMGKAREAAEYFFRAAIVFYKEHDTDGLRRAAKSLKEAITAIPEEEGRKEAKEMAKKAEEWLQAEQNN | 11,932.476 | null | ||||| | SOLUTION NMR | null | T.M. Jacobs;B. Williams;T. Williams;X. Xu;A. Eletsky;J.F. Federizon;T. Szyperski;B. Kuhlman | "Design of structurally distinct proteins using strategies inspired by evolution", Science, 352, 687-690 | 10.1126/science.aad8036|27151863|0038|0036-8075|SCIEAS | US | Solution nmr structure of designed protein da05r1, northeast structural genomics consortium (nesg) target or690 | northeast structural genomics consortium;structural genomics;psi-biology;designed protein;de novo protein;nesg | 2n8i(123) | 4i9c(55);4i9e(55);3ulq(55) | null | null | 2n8i(123) | 4i9c(55) | 2n8i(0.7132999897) | 4i9e(0.635800004) | 1.25.40.290;1.25.40.250;1.25.40.440;1.20.930.10;1.25.40.410;1.20.1440.250;1.25.40.90;1.25.40.970;1.25.40.10;1.10.1240.70;1.20.58.690;1.25.40.240;1.25.40.850 | null |
2nbl | 2017-03-08 | other | id:A;type:U;source:unknown;length:31;seq_nat:XTEIRVXGVTIRMRASHAFWVQVPXKEFKHX;seq_unnat:(NH2)TEIRV(4FU)GVTIRMR(DAL)SH(DAL)FWVQV(DPR)(4G6)KEFKH(ACE) | 3,479.15 | null | ||||| | SOLUTION NMR | null | V. Kung | To be published | |||| | null | Peptide model of 4-stranded beta-arch | de novo protein | null | null | null | null | 2nbl(0) | null | 2nbl(0) | null | null | null |
2nd2 | 2016-09-21 | other | id:A;type:D;source:artificial gene;length:44;seq_nat:APCEDLKERLKKLGMSEECRQRLEKMCKEGTSEDAERMARNCES;seq_unnat:APCEDLKERLKKLGMSEECRQRLEKMCKEGTSEDAERMARNCES | 5,129.892 | null | ||||| | SOLUTION NMR | null | G. Bhardwaj;V.K. Mulligan;C.D. Bahl;J.M. Gilmore;P.J. Harvey;O. Cheneval;G.W. Buchko;S.V. Pulavarti;Q. Kaas;A. Eletsky;P.S. Huang;W.A. Johnsen;P.J. Greisen;G.J. Rocklin;Y. Song;T.W. Linsky;A. Watkins;S.A. Rettie;X. Xu;L.P. Carter;R. Bonneau;J.M. Olson;E. Coutsias;C.E. Correnti;T. Szyperski;D.J. Craik;D. Baker | "Accurate de novo design of hyperstable constrained peptides", Nature, 538, 329-335 | 10.1038/nature19791|27626386|0006|0028-0836|NATUAS | UK | Solution structure of the de novo mini protein ghhh_06 | de novo protein;engineered protein | null | null | null | null | 2nd2(0) | null | 8v2d(0.6050999761) | 2spz(0.5983999968) | 1.10.8.40;1.20.5.420;1.10.8.10;1.10.1900.50 | null |
2nd3 | 2016-09-21 | other | id:A;type:D;source:artificial gene;length:38;seq_nat:QCYTFRSECTNKEFTVCRPNPEEVEKEARRTKEEECRK;seq_unnat:QCYTFRSECTNKEFTVCRPNPEEVEKEARRTKEEECRK | 4,664.215 | null | ||||| | SOLUTION NMR | null | G. Bhardwaj;V.K. Mulligan;C.D. Bahl;J.M. Gilmore;P.J. Harvey;O. Cheneval;G.W. Buchko;S.V. Pulavarti;Q. Kaas;A. Eletsky;P.S. Huang;W.A. Johnsen;P.J. Greisen;G.J. Rocklin;Y. Song;T.W. Linsky;A. Watkins;S.A. Rettie;X. Xu;L.P. Carter;R. Bonneau;J.M. Olson;E. Coutsias;C.E. Correnti;T. Szyperski;D.J. Craik;D. Baker | "Accurate de novo design of hyperstable constrained peptides", Nature, 538, 329-335 | 10.1038/nature19791|27626386|0006|0028-0836|NATUAS | UK | Solution structure of the de novo mini protein geeh_04 | de novo protein;engineered protein | null | null | null | null | 2nd3(0) | null | 8fjf(0.5788000226) | 8ug2(0.685100019) | 3.30.160.110;3.30.160.60;3.30.160.850;3.30.160.880 | null |
2o6n | 2007-10-23 | other | id:A;type:U;source:unknown;length:35;seq_nat:XAEIEQAKKEIAYLIKKAKEEILEEIKKAKQEIAX;seq_unnat:(ACE)AEIEQAKKEIAYLIKKAK(CGU)EIL(CGU)EIKKAKQEIA(NH2) | 3,947.59 | P 4 21 2 | 38.356|38.356|49.679|90.00|90.00|90.00 | X-RAY DIFFRACTION | Chemical peptide synthesis | M. Sales;J.J. Plecs;J.M. Holton;T. Alber | "Structure of a designed, right-handed coiled-coil tetramer containing all biological amino acids", Protein Sci., 16, 2224-2232 | 10.1110/ps.062702907|17766380|0795|0961-8368|PRCIEI | US | Rh4b: designed right-handed coiled coil tetramer with all biological amino acids | tetramer;de novo protein;right-handed | null | null | 1tgg(0.9872000217);1rh4(0.9965000153) | null | null | null | 1rh4(0.9965000153) | null | 1.20.5.420;1.20.5.430;1.20.5.2620;1.20.5.1450;6.10.250.1140;1.20.5.700;6.10.250.2150;6.10.250.200;6.10.250.2720;1.20.5.3960;6.10.250.2060;6.10.250.1090;6.10.250.1210;6.10.250.1020;6.10.250.10;1.20.5.1610;6.10.250.490;6.10.250.380;1.20.5.110;1.20.5.250;1.20.5.460;1.20.5.740;6.10.250.450;1.20.5.170;6.10.250.410;6.10.250.... | null |
2p0x | 2007-08-07 | other | id:A;type:D;source:synthetic gene;length:64;seq_nat:GSFRVKPCVVCKVAPRDWRVKNRHLRIYNMCKTCFNNSIKSGDDTYHGHVDWLMYTDAKEFSST;seq_unnat:GSFRVKPCVVCKVAPRDWRVKNRHLRIYNMCKTCFNNSIKSGDDTYHGHVDWLMYTDAKEFSST | 7,527.653 | P 1 | 1.000|1.000|1.000|90.00|90.00|90.00 | SOLUTION NMR | null | S.S. Mansy;J. Zhang;R. Kummerle;M. Nilsson;J.J. Chou;J.W. Szostak;J.C. Chaput | "Structure and Evolutionary Analysis of a Non-biological ATP-binding Protein", J.Mol.Biol., 371, 501-513 | 10.1016/j.jmb.2007.05.062|17583732|0070|0022-2836|JMOBAK | UK | Solution structure of a non-biological atp-binding protein | de novo protein;alpha/beta fold; treble clef zinc binding motif | null | null | null | null | null | null | 1uw1(0.6988999844) | 2p05(0.6937000155) | 3.10.450.210;2.20.25.110 | null |
2p6j | 2007-08-14 | other | id:A;type:U;source:unknown;length:52;seq_nat:MKQWSENVEEKLKEFVKRHQRITQEELHQYAQRLGLNEEAIRQFFEEFEQRK;seq_unnat:MKQWSENVEEKLKEFVKRHQRITQEELHQYAQRLGLNEEAIRQFFEEFEQRK | 6,605.406 | P 1 | 1.000|1.000|1.000|90.00|90.00|90.00 | SOLUTION NMR | null | P.S. Shah;G.K. Hom;S.A. Ross;J.K. Lassila;K.A. Crowhurst;S.L. Mayo | "Full-sequence Computational Design and Solution Structure of a Thermostable Protein Variant", J.Mol.Biol., 372, 1-6 | 10.1016/j.jmb.2007.06.032|17628593|0070|0022-2836|JMOBAK | UK | Full-sequence computational design and solution structure of a thermostable protein variant | computational protein design;de novo protein;engrailed homeodomain;helix-turn-helix | null | null | null | null | null | null | null | null | null | null |
2qyj | 2007-11-13 | other | id:A;type:U;source:unknown;length:168;seq_nat:MRGSHHHHHHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNEDLAEILQ;seq_unnat:MRGSHHHHHHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVE... | 17,926.096 | P 61 | 74.480|74.480|50.990|90.000|90.000|120.000 | X-RAY DIFFRACTION | The peptide was chemically synthesized | T. Merz;S.K. Wetzel;S. Firbank;A. Pluckthun;M.G. Grutter;P.R.E. Mittl | "Stabilizing ionic interactions in a full-consensus ankyrin repeat protein", J.Mol.Biol., 376, 232-240 | 10.1016/j.jmb.2007.11.047|18155045|0070|0022-2836|JMOBAK | UK | Crystal structure of a designed full consensus ankyrin | de novo protein;ankyrin repeat;helix-turn-helix-beta-turn;repeat protein | null | null | 2xeh(0.9778000116);2xee(0.9697999954);5oou(0.9818000197);6c9k(0.9642000198);7dne(0.9711999893);6fpa(0.9611999989);5knh(0.9588000178);2bkg(0.9707000256);8ql2(0.9682999849);9gtk(0.970600009);4ydw(0.9667000175);4j8y(0.9603999853);7zyu(0.9527000189);7z7e(0.9708999991);8ql3(0.9695000052);6fpb(0.9649000168);1mj0(0.9707999825... | null | null | null | 5oou(0.9818000197) | 1awc(0.9262999892) | 1.10.10.2400;1.10.220.10;1.25.10.10;1.25.40.20;1.25.40.850 | null |
2rt4 | 2014-01-01 | other | id:A;type:U;source:unknown;length:25;seq_nat:GVVRQWSGYDPRTGTWRSSIAYGGG;seq_unnat:GVVRQWSGYDPRTGTWRSSIAYGGG | 2,716.944 | null | ||||| | SOLUTION NMR | The peptide was chemically synthesized | H. Watanabe;K. Yamasaki;S. Honda | "Tracing primordial protein evolution through structurally guided stepwise segment elongation", J.Biol.Chem., 289, 3394-3404 | 10.1074/jbc.M113.530592|24356963|0071|1083-351X|JBCHA3 | US | Nmr structure of designed protein, af.2a1, (ensembles) | chignolin;de novo protein;artificial protein | null | null | null | null | null | null | 5awl(0.3592000008) | null | null | null |
2ru4 | 2014-07-23 | other | id:A;type:D;source:synthetic construct;length:116;seq_nat:GELPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASG;seq_unnat:GELPQMTQQLNSDDMQEQLSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASG|id:B;type:U;source:u... | 12,193.524 | null | ||||| | SOLUTION NMR | null | R.P. Watson;M.T. Christen;C. Ewald;F. Bumbak;C. Reichen;M. Mihajlovic;E. Schmidt;P. Guntert;A. Caflisch;A. Pluckthun;O. Zerbe | "Spontaneous self-assembly of engineered armadillo repeat protein fragments into a folded structure", Structure, 22, 985-995 | 10.1016/j.str.2014.05.002|24931467|2005|0969-2126|STRUE6 | UK | Designed armadillo repeat protein self-assembled complex (yiim2-maii) | solution complex;solenoid repeat;armadillo repeat motif;self-assembly;de novo protein | 6s9m(177);6s9n(177);6s9o(195);6s9p(184);2ru5(158);4dba(218);4db6(198);4db8(218);5mfe(197);5mfn(197);5aei(197);5mfg(197);6s9l(177);5mff(197);5mfh(197);5mfl(198);7r0r(179);5mfd(191);6sa6(171);7qnp(177);6sa7(177);4v3r(187);4v3o(192);4v3q(188);5mfo(197);4db9(198);6sa8(177);4d49(142);5mfk(142);5mfj(145);5mfi(145);4d4e(122);... | 1ee4(117);1ee5(117);1un0(117);2c1t(117);1bk5(115);1bk6(115);1wa5(116);3tpm(87);2c1m(87);3ve6(87);3l3q(87);3btr(87);1y2a(87);1ial(87);1ejl(87);3knd(87);1ejy(87);1pjm(87);1iq1(87);1pjn(87);4oih(87);3q5u(87);3zir(87);2ynr(87);3zin(87);3zio(87);3zip(87);3ziq(87);1q1s(87);1q1t(87);3fex(89);3fey(89);4e4v(89);4ba3(87);4htv(87... | null | null | 4dba(218) | 1ee4(117) | 6s9m(0.8246999979) | 3tj3(0.7732999921) | 1.20.930.10;1.10.10.2400;1.10.220.10;6.10.140.1030;1.20.58.1280;1.10.1240.20;1.25.40.420;1.10.220.100;1.20.50.30;1.20.1050.10;1.20.50.20 | null |
2ru5 | 2014-07-23 | other | id:B;type:D;source:synthetic construct;length:85;seq_nat:GNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEAQEALEKLQSH;seq_unnat:GNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEAQEALEKLQSH | 9,104.069 | null | ||||| | SOLUTION NMR | null | R.P. Watson;M.T. Christen;C. Ewald;F. Bumbak;C. Reichen;M. Mihajlovic;E. Schmidt;P. Guntert;A. Caflisch;A. Pluckthun;O. Zerbe | "Spontaneous self-assembly of engineered armadillo repeat protein fragments into a folded structure", Structure, 22, 985-995 | 10.1016/j.str.2014.05.002|24931467|2005|0969-2126|STRUE6 | UK | Designed armadillo repeat protein fragment (maii) | de novo protein;armadillo repeat motif;solenoid repeat | 6s9m(160);6s9n(160);6s9o(160);6s9p(160);2ru4(158);4dba(158);4db6(158);4db8(158);5mfe(158);5mfn(158);5aei(158);5mfg(158);6s9l(158);5mff(158);5mfh(158);5mfl(158);7r0r(158);5mfd(155);6sa6(155);7qnp(154);6sa7(154);4v3r(153);4v3o(151);4v3q(149);5mfo(146);4db9(146);6sa8(120);4d49(99);5mfk(99);5mfj(93);5mfi(93);4d4e(87);5mfb(... | 1ee4(70);1ee5(70);1un0(70);2c1t(70);1bk5(69);1bk6(69);1wa5(69);3tpm(58);2c1m(58);3ve6(58);3l3q(58);3btr(58);1y2a(58);1ial(58);1ejl(58);3knd(58);1ejy(58);1pjm(58);1iq1(58);1pjn(58);4oih(58);3q5u(58);3zir(58);2ynr(58);3zin(58);3zio(58);3zip(58);3ziq(58);1q1s(58);1q1t(58);3fex(58);3fey(58);4e4v(58);4ba3(58);4htv(58);4mz5(... | null | null | 6s9m(160) | 1ee4(70) | 5mfe(0.5968999863) | 3l6y(0.5873000026) | 1.20.58.1280;1.10.220.100;1.10.220.10;1.20.930.10 | null |
2rvd | 2015-08-12 | other | id:A;type:U;source:unknown;length:10;seq_nat:YYDPETGTWY;seq_unnat:YYDPETGTWY | 1,294.322 | null | ||||| | SOLUTION NMR | null | S. Honda;T. Akiba;Y.S. Kato;Y. Sawada;M. Sekijima;M. Ishimura;A. Ooishi;H. Watanabe;T. Odahara;K. Harata | "Crystal structure of a ten-amino acid protein", J.Am.Chem.Soc., 130, 15327-15331 | 10.1021/ja8030533|18950166|0004|0002-7863|JACSAT | US | Nmr structure of a mutant of chignolin, cln025 | chignolin;de novo protein;mini-protein;beta-hairpin | null | null | null | null | 2rvd(0) | null | 5awl(0.7610999942) | null | null | null |
2wqh | 2010-04-07 | other | id:A;type:U;source:unknown;length:126;seq_nat:GAMDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAKQNLGNAKQKQG;seq_unnat:GAMDPGNSAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELYPNNAEAKQNLGNAKQKQG | 14,513.486 | P 65 2 2 | 62.284|62.284|120.368|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | A.M. Krachler;A. Sharma;C. Kleanthous | "Self-association of TPR domains: Lessons learned from a designed, consensus-based TPR oligomer", Proteins, 78, 2131-2143 | 10.1002/prot.22726|20455268|0867|1097-0134|PSFGEY | US | Crystal structure of ctpr3y3 | tetratricopeptide;de novo protein;tpr domain;mutant | 8ckr(230);8chy(230);8ot7(230);8cqq(230);8cp8(230);8cmq(230);8cqp(230);8cig(230);8bu0(230);8ch0(222);6v8e(196);5hrz(190);6vfh(183);6vfk(182);6vfi(180);6vl6(174);6vfj(168);8umr(140);8ump(140);8fwd(130);6b85(98);8cwz(85);8cut(85);8cus(85);8far(83) | 9gzg(189);1w3b(96);3fwv(71);3esk(70);1elr(70);2vyi(68);2q7f(68);2c0l(65);2c0m(65);2j9q(65);1fch(65);3fp2(62);3fp3(62);3fp4(62);9hvq(61);1qz2(59);9fh0(59);3cvl(57);3cvn(57);3cvp(57);3cvq(57);3cv0(57);1p5q(56);9hb4(56);2bug(51);1a17(51);2e2e(51);9d2f(51);1wao(51) | 8cp8(0.9664000273);2hyz(0.9648000002);8cqp(0.9636999965);8ch0(0.9549999833);8cmq(0.956099987);8ckr(0.9649999738);8cqq(0.9602000117);8chy(0.9688000083);8cig(0.9654999971);2fo7(0.9624000192);6v8e(0.962100029);5hrz(0.966899991);8ump(0.9596999884) | null | 8ckr(230) | 9gzg(189) | 8chy(0.9688000083) | 2vyi(0.9139000177) | null | null |
2x6p | 2010-09-22 | other | id:A,B,C;type:U;source:unknown;length:30;seq_nat:XEWEALEKKLAALESKLQACEKKLEALEHG;seq_unnat:(ACE)EWEALEKKLAALESKLQACEKKLEALEHG | 3,327.842 | P 61 | 38.089|38.089|178.798|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | S. Chakraborty;D.S. Touw;A.F.A. Peacock;J.A. Stuckey;V.L. Pecoraro | "Structural Comparisons of Apo- and Metalated Three-Stranded Coiled Coils Clarify Metal Binding Determinants in Thiolate Containing Designed Peptides", J.Am.Chem.Soc., 132, 13240 | 10.1021/JA101812C|20825181|0004|0002-7863|JACSAT | US | Crystal structure of coil ser l19c | de novo protein;apo;de novo design;three stranded coiled coil | 5u9t(51);5u9u(51);2jgo(51);5k92(51) | null | 3h5f(0.997600019);3h5g(0.9904000163);5k92(0.9923999906);5u9t(0.993900001);1cos(0.9843000174);5u9u(0.996900022);3pbj(0.9805999994);2jgo(0.9970999956);5uxt(1);3ljm(0.9955000281);6ov9(1);5kb0(0.9552000165);1coi(0.959100008);6osd(1);6egl(0.9541000128);6egm(0.953700006);7n2z(0.9578999877);6q1w(1);6u47(0.9965999722);6v57(1);... | null | 5u9t(51) | null | 6ov9(1) | null | 6.10.250.770;1.20.5.420;1.20.5.430;1.20.5.2620;1.20.5.770;1.20.5.1450;1.20.5.700;6.10.250.500;6.10.250.200;6.10.250.2150;6.10.250.880;6.10.250.270;1.20.5.3960;6.10.250.2060;6.10.250.1090;6.10.250.2370;6.10.250.2720;6.10.250.1210;1.20.5.470;6.10.250.1020;6.10.250.1440;6.10.250.10;1.20.5.1610;6.10.250.160;6.10.250.850;6.... | null |
2xee | 2010-08-18 | other | id:A,B,C,D;type:D;source:SYNTHETIC CONSTRUCT;length:158;seq_nat:DLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIDNGNEDIAEVLQKAA;seq_unnat:DLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLL... | 16,787.906 | P 31 2 1 | 62.050|62.050|270.180|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | M. Kramer;S.K. Wetzel;A. Pluckthun;P. Mittl;M. Grutter | "Structural Determinants for Improved Thermal Stability of Designed Ankyrin Repeat Proteins with a Redesigned C-Capping Module", J.Mol.Biol., 404, 381 | 10.1016/J.JMB.2010.09.023|20851127|0070|0022-2836|JMOBAK | UK | Structural determinants for improved thermal stability of designed ankyrin repeat proteins with a redesigned c-capping module | protein-protein interaction;protein engineering;de novo protein | 2xeh(308);7z7e(273);7b4w(271);6fpa(270);7b4t(270);6fpb(270);9gtk(269);9g8i(266);7zyu(266);6fp9(264);7z71(262);7z7c(261);4j7w(261);4j8y(261);8u1b(261);9dmi(261);9gnb(259);7z72(258);5oou(256);5op3(254);4ydw(254);2bkg(253);5kng(252);5knh(252);5oos(251);9fe2(251);9fe3(251);9f22(250);6c9k(250);9ivp(250);8ve7(249);8a19(249);... | 2p2c(258);2bkk(255);1svx(252);9fhc(251);2j8s(251);9fhg(251);9fhj(251);9hao(251);9hci(251);9kcq(250);9kbu(250);2v5q(243);1awc(190);2v4h(188);3hg0(183);1n11(132);2zgg(126);2zgd(126);3b95(115);3b7b(115);1uoh(114);1tr4(114);1qym(114);2dvw(113);2dwz(113);9khf(105);8wfz(105);1ihb(104);1mx4(104);1g3n(104);1bu9(104);1mx6(103);... | 2xeh(0.986100018);7z7e(0.9909999967);2qyj(0.9555000067);9gtk(0.9854000211);7z7c(0.9857000113);6fpb(0.9815999866);6fpa(0.9758999944);7zyu(0.9739999771);4ydw(0.9779999852);5knh(0.9793000221);6fp9(0.9811999798);7b4w(0.9742000103);5le8(0.9811999798);5kng(0.9592000246);4j8y(0.9649000168);7z71(0.9800000191);7z72(0.9562000036... | null | 2xeh(308) | 2p2c(258) | 7z7e(0.9909999967) | 2dwz(0.9169999957) | 1.20.930.10;1.10.10.2400;1.25.40.70;1.10.220.10;1.25.10.10;1.25.40.850;1.25.40.20 | null |
2xeh | 2010-08-18 | other | id:A,B,C;type:D;source:SYNTHETIC CONSTRUCT;length:158;seq_nat:DLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIREGHEDIAEVLQKAA;seq_unnat:DLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKA... | 16,869.068 | P 61 | 128.905|128.905|50.696|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | M. Kramer;S.K. Wetzel;A. Pluckthun;P. Mittl;M. Grutter | "Structural Determinants for Improved Thermal Stability of Designed Ankyrin Repeat Proteins with a Redesigned C-Capping Module", J.Mol.Biol., 404, 381 | 10.1016/J.JMB.2010.09.023|20851127|0070|0022-2836|JMOBAK | UK | Structural determinants for improved thermal stability of designed ankyrin repeat proteins with a redesigned c-capping module | protein-protein interaction;protein engineering;de novo protein | 2xee(309);7z7e(266);7b4w(263);6fpa(262);7b4t(262);6fpb(262);9gtk(261);9g8i(258);7zyu(258);6fp9(257);7z71(254);8u1b(254);9dmi(254);7z7c(253);4j7w(253);4j8y(253);4ydw(252);9gnb(251);7z72(250);5kng(250);5knh(250);5oou(248);5op3(246);9fe2(246);9fe3(246);9epa(246);9fe1(246);2bkg(245);5oos(243);6c9k(243);9ivp(243);9f22(242);... | 2p2c(250);2bkk(248);9fhc(246);2j8s(246);9fhg(246);9fhj(246);9hao(246);9hci(246);1svx(244);9kcq(242);9kbu(242);2v5q(236);1awc(183);2v4h(181);3hg0(176);1n11(136);2zgg(125);2zgd(125);3b95(115);3b7b(115);1uoh(113);1tr4(113);1qym(113);2dvw(112);2dwz(112);1ihb(105);1mx4(104);1mx6(104);1g3n(104);1bu9(104);9khf(103);8wfz(103);... | 2xee(0.9851999879);2qyj(0.9639000297);6fpb(0.9793999791);6fpa(0.9714999795);9gtk(0.9843000174);6fp9(0.9835000038);7zyu(0.9588999748);7z7e(0.9879000187);9g8i(0.9581000209);4j8y(0.9592999816);7b4t(0.9611999989);4ydw(0.972299993);7z7c(0.9728000164);7b4w(0.9704999924);5knh(0.9671000242);5le8(0.9653000236);5leb(0.9724000096... | null | 2xee(309) | 2p2c(250) | 7z7e(0.9879000187) | 2dwz(0.9169999957) | 1.10.10.2400;1.25.40.70;1.10.220.10;1.25.10.10;1.25.40.850;1.25.40.20 | null |
2xen | 2010-08-18 | other | id:A;type:D;source:SYNTHETIC CONSTRUCT;length:92;seq_nat:DLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNEDLAEILQKAA;seq_unnat:DLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNGNEDLAEILQKAA | 9,727.865 | C 1 2 1 | 77.150|35.330|32.400|90.00|114.43|90.00 | X-RAY DIFFRACTION | null | M. Kramer;S.K. Wetzel;A. Pluckthun;P. Mittl;M. Grutter | "Structural Determinants for Improved Thermal Stability of Designed Ankyrin Repeat Proteins with a Redesigned C-Capping Module", J.Mol.Biol., 404, 381 | 10.1016/J.JMB.2010.09.023|20851127|0070|0022-2836|JMOBAK | UK | Structural determinants for improved thermal stability of designed ankyrin repeat proteins with a redesigned c-capping module | ankyrin;protein-protein interaction;design;repeat protein;protein engineering;de novo protein | 2xee(148);7b4v(145);7b4u(145);7z73(144);2xeh(144);8rci(143);9f23(143);2jab(143);8hkh(143);9fzb(141);9f24(139);5oou(138);4j7w(138);4j8y(138);7b4w(135);7z72(134);7b4t(134);9gtk(133);7z7e(132);7zyu(132);6fpa(132);6fpb(132);2bkg(132);5oos(132);5op3(132);7dng(132);9fe2(132);9fe3(132);7dnf(132);9gau(131);9f22(131);8ql6(131);... | 2zgg(161);2zgd(161);3hg0(147);2v4h(147);2p2c(137);2bkk(136);9fhc(132);9kcq(132);2j8s(132);9kbu(132);9fhg(132);9fhj(132);9hao(132);9hci(132);1svx(131);2v5q(123);1awc(109);1bd8(69);1bi8(69);1mx4(68);1mx6(68);1ihb(66);1blx(65);1mx2(65);1g3n(65);1ap7(65);1bu9(65);9khf(65);8wfz(65);1uoh(63);1tr4(63);1qym(63);2dvw(63);2dwz(6... | null | null | 2xee(148) | 2zgg(161) | 4hqd(0.9431999922) | 2v5q(0.9329000115) | 1.10.220.10;1.25.40.70;1.25.40.20;1.25.10.10 | null |
2zta | 1992-10-15 | other | id:A,B;type:N;source:Saccharomyces cerevisiae;length:34;seq_nat:XRMKQLEDKVEELLSKNYHLENEVARLKKLVGER;seq_unnat:(ACE)RMKQLEDKVEELLSKNYHLENEVARLKKLVGER | 4,031.701 | C 1 2 1 | 101.630|30.350|21.860|90.00|94.70|90.00 | X-RAY DIFFRACTION | null | E.K. O'Shea;J.D. Klemm;P.S. Kim;T. Alber | "X-ray structure of the GCN4 leucine zipper, a two-stranded, parallel coiled coil", Science, 254, 539-544 | |1948029|0038|0036-8075|SCIEAS | US | X-ray structure of the gcn4 leucine zipper, a two-stranded, parallel coiled coil | leucine zipper | null | null | null | null | null | null | null | null | null | null |
3al1 | 1998-11-04 | other | id:A,B;type:U;source:unknown;length:13;seq_nat:XELLKKLLEELKG;seq_unnat:(ACE)ELLKKLLEELKG | 1,441.775 | P -1 | 20.544|20.859|26.055|101.16|97.03|118.06 | X-RAY DIFFRACTION | Peptide was synthesized via solid phase synthesis and designed to be an amphiphilic helix | W.R. Patterson;D.H. Anderson;W.F. DeGrado;D. Cascio;D. Eisenberg | "Centrosymmetric bilayers in the 0.75 A resolution structure of a designed alpha-helical peptide, D,L-Alpha-1", Protein Sci., 8, 1410-1422 | |10422829|0795|0961-8368|PRCIEI | US | Designed peptide alpha-1, racemic p1bar form | racemic;centric;biomaterial;structural protein;helical bilayer | null | null | 1byz(1) | null | null | null | 1byz(1) | null | 6.10.250.1960;6.10.250.2050;4.10.180.60;6.10.250.400;1.20.5.640;1.20.5.460;4.10.180.10;6.10.250.310;6.10.250.1560;1.20.5.220;6.10.250.1110 | null |
3cay | 2008-09-09 | other | id:A,B,C,D,E,F,G,H,I,J,K,L;type:U;source:unknown;length:27;seq_nat:XAXAEAAEKAAKYAAEAAEKAAKAXAX;seq_unnat:(ACE)A(O12)AEAAEKAAKYAAEAAEKAAKA(O12)A(NH2) | 2,826.394 | P 21 21 2 | 72.484|130.040|42.807|90.00|90.00|90.00 | X-RAY DIFFRACTION | De novo designed lipopeptide | D.N. Ho;N.C. Pomroy;J.A. Cuesta-Seijo;G.G. Prive | "Crystal structure of a self-assembling lipopeptide detergent at 1.20 A", Proc.Natl.Acad.Sci.USA, 105, 12861-12866 | 10.1073/pnas.0801941105|18753631|0040|0027-8424|PNASA6 | US | Crystal structure of lipopeptide detergent (lpd-12) | detergent;alpha helix;acyl chains;lipopeptide;self-assembling peptide;amphiphilic;de novo protein | null | null | null | null | null | null | 3cay(0) | null | null | null |
3h5f | 2009-07-14 | other | id:A,B,C;type:U;source:unknown;length:31;seq_nat:XEWEALEKKLAALESKXQALEKKLEALEHGX;seq_unnat:(ACE)EWEALEKKLAALESK(LE1)QALEKKLEALEHG(NH2) | 3,353.903 | C 1 2 1 | 77.827|29.244|44.460|90.000|118.800|90.000 | X-RAY DIFFRACTION | Synthetic construct | A.F. Peacock;J.A. Stuckey;V.L. Pecoraro | "Switching the Chirality of the Metal Environment Alters the Coordination Mode in Designed Peptides", Angew.Chem.Int.Ed.Engl., 48, 7371-7374 | 10.1002/anie.200902166|19579245|9999|1433-7851| | GE | Switching the chirality of the metal environment alters the coordination mode in designed peptides | de novo protein;l-penicillamine;parallel three-stranded coiled coil;de-novo protein | null | null | 5k92(1);3h5g(0.9970999956);5u9t(1);5u9u(0.9965000153);2jgo(1);3ljm(1);2x6p(0.997699976);1cos(0.9919000268);3pbj(0.9858000278);5uxt(0.9934999943);6egn(0.9559999704);6osd(0.9943000078);6v57(0.9958000183);6v4y(0.9937999845);6q1w(0.9984999895);6u47(0.9930999875);6v5g(0.997699976);6v5i(1);6v5j(0.9990000129);6ego(0.954400003... | null | null | null | 5k92(1) | null | 6.10.250.770;1.20.5.420;1.20.5.2620;1.20.5.1450;1.20.5.700;6.10.250.500;6.10.250.200;6.10.250.2150;6.10.250.880;6.10.250.270;1.20.5.3960;6.10.250.2060;6.10.250.1090;6.10.250.2720;6.10.250.1210;6.10.250.1020;6.10.250.1440;1.20.5.1610;6.10.250.160;6.10.250.850;6.10.250.490;6.10.250.380;1.20.5.110;1.20.5.250;6.10.250.3290... | null |
3h5g | 2009-07-14 | other | id:A,B,C;type:U;source:unknown;length:31;seq_nat:XEWEALEKKLAALESKVQALEKKLEALEHGX;seq_unnat:(ACE)EWEALEKKLAALESK(LEI)QALEKKLEALEHG(NH2) | 3,353.903 | C 1 2 1 | 76.723|29.237|44.385|90.00|119.60|90.00 | X-RAY DIFFRACTION | Synthetic construct | A.F. Peacock;J.A. Stuckey;V.L. Pecoraro | "Switching the Chirality of the Metal Environment Alters the Coordination Mode in Designed Peptides", Angew.Chem.Int.Ed.Engl., 48, 7371-7374 | 10.1002/anie.200902166|19579245|9999|1433-7851| | GE | Switching the chirality of the metal environment alters the coordination mode in designed peptides | de novo protein;d-penicillamine;parallel three-stranded coiled coil;de-novo protein | null | null | 3h5f(0.9962000251);5k92(1);5u9t(1);5u9u(0.996900022);2jgo(1);3ljm(1);2x6p(0.9898999929);1cos(0.9854000211);3pbj(0.9822000265);5uxt(0.9901999831);6osd(0.991599977);6q1w(0.9919999838);6u47(0.986199975);6v57(0.9901000261);6v5g(0.9876000285);6v5i(0.9894000292);6v5j(0.9919999838);6v4y(0.9901999831);6os8(0.9886999726);6ovu(0... | null | null | null | 5u9t(1) | null | 6.10.250.770;1.20.5.420;1.20.5.2620;1.20.5.1450;1.20.5.700;6.10.250.500;6.10.250.1150;6.10.250.200;6.10.250.2150;6.10.250.880;6.10.250.270;1.20.5.3960;6.10.250.2060;6.10.250.1090;6.10.250.2370;6.10.250.1210;6.10.250.2720;6.10.250.1020;6.10.250.1440;1.20.5.1610;6.10.250.160;6.10.250.850;6.10.250.490;6.10.250.380;1.20.5.... | null |
3he4 | 2010-03-23 | other | id:A,C,E,G;type:D;source:artificial gene;length:56;seq_nat:GSQKVAQLKNRVAYKLKENAKLENIVARLENDNANLEKDIANLEKDIANLERDVAR;seq_unnat:GSQKVAQLKNRVAYKLKENAKLENIVARLENDNANLEKDIANLEKDIANLERDVAR|id:B,D,F,H;type:U;source:unknown;length:46;seq_nat:GSNTVKELKNYIQELEERNAELKNLKEHLKFAKAELEFELAAHKFE;seq_unnat:GSNTVKELKNYIQELEERNAELKNLKEHL... | 6,359.188 | P 63 | 82.678|82.678|150.545|90.000|90.000|120.000 | X-RAY DIFFRACTION | null | A.W. Reinke;R.A. Grant;A.E. Keating | "A synthetic coiled-coil interactome provides heterospecific modules for molecular engineering", J.Am.Chem.Soc., 132, 6025-6031 | 10.1021/ja907617a|20387835|0004|0002-7863|JACSAT | US | Heterospecific coiled-coil pair synzip5:synzip6 | de novo protein;heterodimeric coiled-coil | null | null | null | null | 3he4(0) | null | 3he5(0.9366999865) | null | 6.10.250.750;6.10.250.3050;1.20.5.930;4.10.81.10;6.10.250.2070;1.20.5.430;1.20.1070.10;4.10.170.10;6.10.250.1140;1.20.5.750;1.20.5.690;1.10.287.210;1.20.5.520;1.20.5.730;1.20.5.240;6.10.250.10;1.20.5.390;1.20.5.190;1.20.5.3600;1.20.5.80;1.20.5.110;1.20.5.250;1.20.5.1500;1.20.5.580;1.20.5.1220;6.10.250.1920;1.20.890.10;... | null |
3he5 | 2010-03-23 | other | id:A,C,E;type:D;source:artificial gene;length:49;seq_nat:GSNLVAQLENEVASLENENETLKKKNLHKKDLIAYLEKEIANLRKKIEE;seq_unnat:GSNLVAQLENEVASLENENETLKKKNLHKKDLIAYLEKEIANLRKKIEE|id:B,D,F;type:U;source:unknown;length:52;seq_nat:GSARNAYLRKKIARLKKDNLQLERDEQNLEKIIANLRDEIARLENEVASHEQ;seq_unnat:GSARNAYLRKKIARLKKDNLQLERDEQNLEKIIANLRDEIA... | 5,659.444 | P 31 | 49.905|49.905|113.228|90.000|90.000|120.000 | X-RAY DIFFRACTION | null | A.W. Reinke;R.A. Grant;A.E. Keating | "A synthetic coiled-coil interactome provides heterospecific modules for molecular engineering", J.Am.Chem.Soc., 132, 6025-6031 | 10.1021/ja907617a|20387835|0004|0002-7863|JACSAT | US | Heterospecific coiled-coil pair synzip2:synzip1 | de novo protein;heterodimeric coiled-coil | null | null | null | null | 3he5(0) | null | 3he4(0.8720999956) | null | 6.10.250.750;6.10.250.3050;1.20.5.480;4.10.81.10;1.20.5.430;1.10.287.340;1.20.1070.10;4.10.170.10;6.10.250.1140;1.20.5.2280;1.20.5.750;1.20.5.690;1.10.287.210;6.10.250.1530;1.20.5.520;1.20.5.730;1.20.5.240;1.20.5.760;6.10.250.10;6.10.250.1060;1.20.5.390;1.20.5.190;1.20.5.1700;6.10.250.230;1.20.5.3600;1.20.5.530;1.20.5.... | null |
3i1c | 2009-08-18 | other | id:A;type:N;source:Loligo vulgaris;length:328;seq_nat:MEIPVIEPLFTKVTEDIPGAAGPVFDKNGDFYIVAPYVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPIGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCAYCAFDYEGNLWITAPAGEVAPADFTISLQEKFGSIYCFTTDGQMIQVDTAFQAPAGIAVRHMNDGRPYQLIVAEQPTKKLWSYDIKGPAKIENKKVWGHIPGTHKGGAAGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCP... | 36,102.016 | P 21 21 21 | 41.239|83.112|85.180|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | J.B. Siegel;A. Zanghellini;H.M. Lovick;G. Kiss;A.R. Lambert;J.L. St Clair;J.L. Gallaher;D. Hilvert;M.H. Gelb;B.L. Stoddard;K.N. Houk;F.E. Michael;D. Baker | "Computational design of an enzyme catalyst for a stereoselective bimolecular Diels-Alder reaction", Science, 329, 309-313 | 10.1126/science.1190239|20647463|0038|0036-8075|SCIEAS | US | Crystal structure of a novel engineered diels-alderase: da_20_00_a74i | beta-propeller;hydrolase;metal-binding | null | null | null | null | null | null | null | null | null | null |
3j89 | 2015-02-11 | other | id:A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S;type:U;source:unknown;length:29;seq_nat:QARILEADAEILRAYARILEAHAEILRAQ;seq_unnat:QARILEADAEILRAYARILEAHAEILRAQ | 3,309.797 | P 1 | 1|1|1|90|90|90 | ELECTRON MICROSCOPY | null | E.H. Egelman;C. Xu;F. DiMaio;E. Magnotti;C. Modlin;X. Yu;E. Wright;D. Baker;V.P. Conticello | "Structural plasticity of helical nanotubes based on coiled-coil assemblies", Structure, 23, 280-289 | 10.1016/j.str.2014.12.008|25620001|2005|0969-2126|STRUE6 | UK | Structural plasticity of helical nanotubes based on coiled-coil assemblies | synthetic peptide;helical filament;coiled-coil;nanotube | null | null | 7rx5(0.9599000216) | null | 6wl1(45) | null | 7rx5(0.9599000216) | null | 6.10.250.770;1.20.5.420;1.20.5.430;1.20.5.2620;1.20.5.1450;1.20.5.700;6.10.250.500;6.10.250.200;6.10.250.2150;6.10.250.880;6.10.250.270;1.20.5.3960;6.10.250.2060;6.10.250.1090;6.10.250.2720;6.10.250.2370;6.10.250.1210;6.10.250.1020;6.10.250.1440;1.20.5.1610;6.10.250.160;6.10.250.850;6.10.250.490;6.10.250.380;1.20.5.110... | null |
3kd7 | 2010-02-02 | other | id:A,B,C,D,E;type:N;source:UNIDENTIFIED;length:126;seq_nat:GAMDPGNSAEAWKNLGNAYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKAIEYYQKALELDPNNAKAWYRRGNAYYKQGDYQKAIEDYQKALELDPNNAKAKQNLGNAKQKQG;seq_unnat:GAMDPGNSAEAWKNLGNAYYKQGDYQKAIEYYQKALELDPNNASAWYNLGNAYYKQGDYQKAIEYYQKALELDPNNAKAWYRRGNAYYKQGDYQKAIEDYQKALELDPNNAKAKQNLGNAKQKQG... | 14,371.691 | H 3 | 100.674|100.674|161.574|90.00|90.00|120.00 | X-RAY DIFFRACTION | This sequence comprises the 5 c-terminal residues of hsp90 | A.L. Cortajarena;J. Wang;L. Regan | "Crystal structure of a designed tetratricopeptide repeat module in complex with its peptide ligand", Febs J., 277, 1058-1066 | 10.1111/j.1742-4658.2009.07549.x|20089039||1742-464X| | UK | Designed tpr module (ctpr390) in complex with its peptide-ligand (hsp90 peptide) | tpr-ligand complex;superhelical structure;tetratricopeptide repeat (tpr);hsp90 binding;repeat protein;designed protein;de novo protein | null | null | null | null | null | null | null | null | null | null |
3lhp | 2010-09-22 | other | id:H,I;type:N;source:Homo sapiens;length:138;seq_nat:GSQVQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNYAPRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTTGAGWLGKPIGAFAHWGQGTLVTVSSLEHHHHHH;seq_unnat:GSQVQLVQSGAEVKRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNYAPRFQGRITITADRSTSTAYLELNSLRPEDTAVYYCAREGTTGAGWLGKPIGAFAHW... | 14,712.454 | P 21 21 21 | 52.977|88.623|149.997|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | B.E. Correia;Y.E. Ban;M.A. Holmes;H. Xu;K. Ellingson;Z. Kraft;C. Carrico;E. Boni;D.N. Sather;C. Zenobia;K.Y. Burke;T. Bradley-Hewitt;J.F. Bruhn-Johannsen;O. Kalyuzhniy;D. Baker;R.K. Strong;L. Stamatatos;W.R. Schief | "Computational Design of Epitope-Scaffolds Allows Induction of Antibodies Specific for a Poorly Immunogenic HIV Vaccine Epitope", Structure, 18, 1116-1126 | 10.1016/j.str.2010.06.010|20826338|2005|0969-2126|STRUE6 | UK | Crystal structure of hiv epitope-scaffold 4e10_d0_1isea_004_n 4e10 fv complex | immune system;epitope-scaffold | 4l8i(87);4n9g(71) | 1y69(126);3lf9(126);1ise(108);1zn1(104);1ek8(104);1zn0(104);2rdo(104);1is1(71) | null | null | 4l8i(87) | 1y69(126) | 4oyd(0.8410999775) | 3lf9(0.8547999859) | 1.20.58.420;1.20.58.80;1.20.58.60;1.10.287.1060;1.20.58.90;1.10.287.990;1.20.120.320;1.20.58.220;1.20.58.340;1.10.132.20;1.20.58.400;1.20.1300.10;1.20.58.120;1.20.58.240;1.20.58.310;1.10.132.30;1.20.58.1440;1.20.58.70 | null |
3ljm | 2010-09-15 | other | id:A,B,C;type:U;source:unknown;length:31;seq_nat:XEWEALEKKCAALESKLQALEKKLEALEHGX;seq_unnat:(ACE)EWEALEKKCAALESKLQALEKKLEALEHG(NH2) | 3,325.85 | C 1 2 1 | 77.940|29.856|44.361|90.00|119.15|90.00 | X-RAY DIFFRACTION | Synthesized in automated peptide synthesizer | S. Chakraborty;D.S. Touw;A.F. Peacock;J. Stuckey;V.L. Pecoraro | "Structural comparisons of apo- and metalated three-stranded coiled coils clarify metal binding determinants in thiolate containing designed peptides", J.Am.Chem.Soc., 132, 13240-13250 | 10.1021/ja101812c|20825181|0004|0002-7863|JACSAT | US | Structure of de novo designed apo peptide coil ser l9c | three stranded coiled coil;de novo protein;apo;de novo design | null | null | 2jgo(1);3h5f(1);3h5g(1);5k92(1);5u9t(1);1cos(0.9894000292);5u9u(0.9955000281);3pbj(0.9840000272);2x6p(0.99150002);5uxt(0.9919999838);6osd(0.9911999702);6q1w(0.9911000133);6v57(0.9911000133);6v5g(0.9880999923);6v5i(0.9897000194);6v5j(0.9894000292);6u47(0.9880999923);6egn(0.9559999704);6os8(0.9896000028);6ovu(0.991100013... | null | null | null | 2jgo(1) | null | 6.10.250.770;1.20.5.420;1.20.5.430;1.20.5.2620;1.20.5.1450;1.20.5.700;6.10.250.500;6.10.250.200;6.10.250.2150;6.10.250.880;6.10.250.270;1.20.5.3960;6.10.250.2060;6.10.250.1090;6.10.250.2370;6.10.250.2720;6.10.250.1210;1.20.5.470;6.10.250.1020;6.10.250.1440;6.10.250.10;1.20.5.1610;6.10.250.160;6.10.250.850;6.10.250.490;... | null |
3lt8 | 2010-09-22 | other | id:A;type:D;source:synthetic construct;length:82;seq_nat:GSMDYKDDDDKKTNWLKRIYRVRPCVKCKVAPRNWKVKNKHLRIYNMCKTCFNNSIDIGDDTYHGHVDWLMYADSKEISNT;seq_unnat:GSMDYKDDDDKKTNWLKRIYRVRPCVKCKVAPRNWKVKNKHLRIYNMCKTCFNNSIDIGDDTYHGHVDWLMYADSKEISNT | 9,707.128 | P 32 2 1 | 71.461|71.461|55.583|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | C.R. Simmons;C.L. Magee;D.A. Smith;L. Lauman;J.C. Chaput;J.P. Allen | "Three-dimensional structures reveal multiple ADP/ATP binding modes for a synthetic class of artificial proteins", Biochemistry, 49, 8689-8699 | 10.1021/bi100398p|20822107|0033|0006-2960|BICHAW | US | A non-biological atp binding protein with a single point mutation (d65v), that contributes to optimized folding and ligand binding, crystallized in the presence of 100 mm atp | de novo protein;alpha/beta fold;bent atp;non-biological protein | 3lt9(185);3ltb(184);3ltc(184);3ltd(184);3lta(183);1uw1(178) | 2p09(184);3dgl(184);3dgm(184);3dgn(184);3dgo(183);2p05(180) | 3lt9(1);3ltb(1);3lta(0.9997000098);3ltc(0.9962000251);3ltd(0.9980999827);1uw1(0.9656999707) | 3dgl(0.9995999932);3dgo(1) | 3lt9(185) | 2p09(184) | 3lt9(1) | 3dgo(1) | 3.10.450.210 | null |
3lt9 | 2010-09-22 | other | id:A;type:D;source:synthetic construct;length:82;seq_nat:GSMDYKDDDDKKTNWLKRIYRVRPCVKCKVAPRNWKVKNKHLRIYNMCKTCFNNSIDIGDDTYHGHVDWLMYADSKEISNT;seq_unnat:GSMDYKDDDDKKTNWLKRIYRVRPCVKCKVAPRNWKVKNKHLRIYNMCKTCFNNSIDIGDDTYHGHVDWLMYADSKEISNT | 9,707.128 | P 32 2 1 | 71.461|71.461|55.583|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | C.R. Simmons;C.L. Magee;D.A. Smith;L. Lauman;J.C. Chaput;J.P. Allen | "Three-dimensional structures reveal multiple ADP/ATP binding modes for a synthetic class of artificial proteins", Biochemistry, 49, 8689-8699 | 10.1021/bi100398p|20822107|0033|0006-2960|BICHAW | US | A non-biological atp binding protein with a single point mutation (d65v), that contributes to optimized folding and ligand binding | de novo protein;alpha/beta fold;bent atp;non-biological protein | 3lt8(185);3ltb(184);3ltc(184);3ltd(184);3lta(183);1uw1(178) | 2p09(184);3dgl(184);3dgm(184);3dgn(184);3dgo(183);2p05(180) | 3lt8(1);3ltb(1);3lta(0.9997000098);3ltc(0.9962000251);3ltd(0.9980999827);1uw1(0.9656999707) | 3dgl(0.9995999932);3dgo(1) | 3lt8(185) | 2p09(184) | 3lt8(1) | 3dgo(1) | 3.10.450.210 | null |
3lta | 2010-09-22 | other | id:A;type:D;source:synthetic construct;length:82;seq_nat:GSMDYKDDDDKKTNWLKRIYRVRPCVKCKVAPRDWKVKNKHLRIFNMCKTCFNNSIDIGDDTYHGHVDWLMYADSKEISNT;seq_unnat:GSMDYKDDDDKKTNWLKRIYRVRPCVKCKVAPRDWKVKNKHLRIFNMCKTCFNNSIDIGDDTYHGHVDWLMYADSKEISNT | 9,692.112 | P 32 2 1 | 71.107|71.107|55.935|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | C.R. Simmons;C.L. Magee;D.A. Smith;L. Lauman;J.C. Chaput;J.P. Allen | "Three-dimensional structures reveal multiple ADP/ATP binding modes for a synthetic class of artificial proteins", Biochemistry, 49, 8689-8699 | 10.1021/bi100398p|20822107|0033|0006-2960|BICHAW | US | Crystal structure of a non-biological atp binding protein with a tyr-phe mutation within the ligand binding domain | de novo protein;alpha/beta fold;bent atp;non-biological protein | 3ltb(185);3ltc(185);3ltd(185);3lt9(181);3lt8(181);1uw1(175) | 3dgo(186);2p09(185);3dgl(185);3dgm(185);3dgn(185);2p05(176) | 3lt8(0.9997000098);3lt9(0.9997000098);3ltb(0.9983000159);3ltd(0.9977999926);3ltc(0.9957000017);1uw1(0.9607999921) | 3dgo(0.9994000196);3dgl(0.9962999821) | 3ltb(185) | 3dgo(186) | 3lt8(0.9997000098) | 3dgo(0.9994000196) | 3.10.450.210 | null |
3ltb | 2010-09-22 | other | id:A;type:D;source:synthetic construct;length:82;seq_nat:GSMDYKDDDDKKTNWLKRIYRVRPCVKCKVAPRDWKVKNKHLRIYNMCKTCFNNSIDIGDDTYHGHVDWLMYADSKEISNT;seq_unnat:GSMDYKDDDDKKTNWLKRIYRVRPCVKCKVAPRDWKVKNKHLRIYNMCKTCFNNSIDIGDDTYHGHVDWLMYADSKEISNT | 9,708.112 | P 32 2 1 | 72.255|72.255|54.880|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | C.R. Simmons;C.L. Magee;D.A. Smith;L. Lauman;J.C. Chaput;J.P. Allen | "Three-dimensional structures reveal multiple ADP/ATP binding modes for a synthetic class of artificial proteins", Biochemistry, 49, 8689-8699 | 10.1021/bi100398p|20822107|0033|0006-2960|BICHAW | US | X-ray structure of a non-biological atp binding protein determined in the presence of 10 mm atp at 2.6 a after 3 weeks of incubation | de novo protein;alpha/beta fold;bent atp;non-biological protein | 3ltc(186);3ltd(186);3lta(184);3lt9(183);3lt8(183);1uw1(176) | 2p09(186);3dgl(186);3dgm(186);3dgn(186);3dgo(184);2p05(178) | 3ltc(0.9975000024);3lt8(1);3lt9(1);3ltd(1);3lta(0.9984999895);1uw1(0.9609000087) | 3dgl(1);3dgo(1) | 3ltc(186) | 2p09(186) | 3lt8(1) | 3dgl(1) | 3.10.450.210 | null |
3ltc | 2010-09-22 | other | id:A;type:D;source:synthetic construct;length:82;seq_nat:GSMDYKDDDDKKTNWLKRIYRVRPCVKCKVAPRDWKVKNKHLRIYNMCKTCFNNSIDIGDDTYHGHVDWLMYADSKEISNT;seq_unnat:GSMDYKDDDDKKTNWLKRIYRVRPCVKCKVAPRDWKVKNKHLRIYNMCKTCFNNSIDIGDDTYHGHVDWLMYADSKEISNT | 9,708.112 | P 32 2 1 | 73.702|73.702|54.760|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | C.R. Simmons;C.L. Magee;D.A. Smith;L. Lauman;J.C. Chaput;J.P. Allen | "Three-dimensional structures reveal multiple ADP/ATP binding modes for a synthetic class of artificial proteins", Biochemistry, 49, 8689-8699 | 10.1021/bi100398p|20822107|0033|0006-2960|BICHAW | US | X-ray structure of a non-biological atp binding protein determined in the presence of 10 mm atp at 2.0 a by multi-wavelength anomalous dispersion | de novo protein;alpha/beta fold;bent atp;non-biological protein | 3ltb(186);3ltd(186);3lta(184);3lt9(183);3lt8(183);1uw1(176) | 2p09(186);3dgl(186);3dgm(186);3dgn(186);3dgo(184);2p05(178) | 3ltd(0.9987000227);3ltb(0.997699976);3lt8(0.9963999987);3lt9(0.9963999987);3lta(0.9959999919);1uw1(0.9607999921) | 3dgl(1);3dgo(0.9973000288) | 3ltb(186) | 2p09(186) | 3ltd(0.9987000227) | 3dgl(1) | 3.10.450.210 | null |
3ltd | 2010-09-22 | other | id:A;type:D;source:synthetic construct;length:82;seq_nat:GSMDYKDDDDKKTNWLKRIYRVRPCVKCKVAPRDWKVKNKHLRIYNMCKTCFNNSIDIGDDTYHGHVDWLMYADSKEISNT;seq_unnat:GSMDYKDDDDKKTNWLKRIYRVRPCVKCKVAPRDWKVKNKHLRIYNMCKTCFNNSIDIGDDTYHGHVDWLMYADSKEISNT | 9,708.112 | P 32 2 1 | 73.145|73.145|54.804|90.00|90.00|120.00 | X-RAY DIFFRACTION | null | C.R. Simmons;C.L. Magee;D.A. Smith;L. Lauman;J.C. Chaput;J.P. Allen | "Three-dimensional structures reveal multiple ADP/ATP binding modes for a synthetic class of artificial proteins", Biochemistry, 49, 8689-8699 | 10.1021/bi100398p|20822107|0033|0006-2960|BICHAW | US | X-ray structure of a non-biological atp binding protein determined at 2.8 a by multi-wavelength anomalous dispersion | de novo protein;alpha/beta fold;bent atp;non-biological protein | 3ltb(186);3ltc(186);3lta(184);3lt9(183);3lt8(183);1uw1(176) | 2p09(186);3dgl(186);3dgm(186);3dgn(186);3dgo(184);2p05(178) | 3ltc(0.9991000295);3ltb(1);3lt8(0.9980999827);3lt9(0.9980999827);3lta(0.997699976);1uw1(0.9639000297) | 3dgl(0.9998000264);3dgo(0.9993000031) | 3ltb(186) | 2p09(186) | 3ltb(1) | 3dgl(0.9998000264) | 3.10.450.210 | null |
3ltj | 2010-10-13 | other | id:A;type:D;source:synthetic;length:203;seq_nat:MRGSHHHHHHTDPEKVEMYIKNLQDDSYYVRRAAAYALGKIGDERAVEPLIKALKDEDAWVRRAAADALGQIGDERAVEPLIKALKDEDGWVRQSAAVALGQIGDERAVEPLIKALKDEDWFVRIAAAFALGEIGDERAVEPLIKALKDEDGWVRQSAADALGEIGGERVRAAMEKLAETGTGFARKVAVNYLETHKSLIS;seq_unnat:MRGSHHHHHHTDPEKVEMYIKNLQDDSYYVRRAAAYALGKIGDERAVEPLIKALKDEDAW... | 22,224.102 | P 21 21 2 | 64.630|85.180|34.230|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | A. Urvoas;A. Guellouz;M. Valerio-Lepiniec;M. Graille;D. Durand;D.C. Desravines;H. van Tilbeurgh;M. Desmadril;P. Minard | "Design, production and molecular structure of a new family of artificial alpha-helicoidal repeat proteins ( alpha Rep) based on thermostable HEAT-like repeats", J.Mol.Biol., 404, 307-327 | 10.1016/j.jmb.2010.09.048|20887736|0070|0022-2836|JMOBAK | UK | Structure of a new family of artificial alpha helicoidal repeat proteins (alpha-rep) based on thermostable heat-like repeats | protein engineering;protein binding;heat-like repeat | 4jw2(400);3ltm(371);4zv6(293);6bzx(293);6veh(284);4jw3(225) | 1te4(149) | 4jw2(0.9688000083);3ltm(0.9538999796);4zv6(0.9606999755) | null | 4jw2(400) | 1te4(149) | 4jw2(0.9688000083) | 1wa5(0.6421999931) | 1.25.40.290;1.25.40.250;1.25.40.40;1.25.40.70;1.10.10.2400;1.25.60.10;1.25.10.10;1.25.40.90;1.25.40.10;1.10.1240.70;1.25.40.60;1.25.40.850 | null |
3ltm | 2010-10-13 | other | id:A,B;type:D;source:Synthetic;length:213;seq_nat:AWSHPQFEKAAAPLRADPEKVEMYIKNLQDDSYYVRRAAAYALGKIGDERAVEPLIKALKDEDAWVRRAAADALGQIGDERAVEPLIKALKDEDGWVRQSAAVALGQIGDERAVEPLIKALKDEDWFVRIAAAFALGEIGDERAVEPLIKALKDEDGWVRQSAADALGEIGGERVRAAMEKLAETGTGFARKVAVNYLETHKSFNHHHHHH;seq_unnat:AWSHPQFEKAAAPLRADPEKVEMYIKNLQDDSYYVRRAAAYALGKIGD... | 23,403.359 | P 1 21 1 | 42.440|52.450|83.970|90.00|91.37|90.00 | X-RAY DIFFRACTION | null | A. Urvoas;A. Guellouz;M. Valerio-Lepiniec;M. Graille;D. Durand;D.C. Desravines;H. van Tilbeurgh;M. Desmadril;P. Minard | "Design, production and molecular structure of a new family of artificial alpha-helicoidal repeat proteins ( alpha Rep) based on thermostable HEAT-like repeats", J.Mol.Biol., 404, 307-327 | 10.1016/j.jmb.2010.09.048|20887736|0070|0022-2836|JMOBAK | UK | Structure of a new family of artificial alpha helicoidal repeat proteins (alpha-rep) based on thermostable heat-like repeats | protein engineering;protein binding;heat-like repeat | 3ltj(372);4jw2(372);6veh(291);4zv6(279);6bzx(279);4jw3(196) | 1te4(149) | 3ltj(0.9690999985);4jw2(0.9588999748);4zv6(0.9520000219) | null | 3ltj(372) | 1te4(149) | 3ltj(0.9690999985) | 1oyz(0.679099977) | 1.25.40.250;1.25.40.90;1.25.10.10;1.25.40.420;1.25.40.750;1.25.40.40;1.25.40.70;1.25.40.580;1.20.50.20;1.25.40.850;1.25.40.290;1.10.10.2400;1.25.40.450;1.25.60.10;1.25.40.10;1.10.1240.70;1.25.40.320;1.20.58.770;1.25.40.180;1.25.40.350;1.25.40.20 | null |
3m22 | 2010-05-12 | other | id:A,B,C,D;type:D;source:synthetic construct;length:239;seq_nat:MVSKGEELIKENMHMKLYMEGTVNNHHFKCTSEGEGKPYEGTQTMRIKVVEGGPLPFAFDILATSFMYGSRTFINHTQGIPDFFKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFPSNGPVMQKKTLGWEANTEMLYPADGGLEGRSDMALKLVGGGHLICNFKTTYRSKKPAKNLKMPGVYYVDHRLERIKEADKETYVEQHEVAVARYCDLPSKLGHKLN;seq_unnat:MVSKGEEL... | 26,747.508 | I 41 | 130.989|130.989|105.966|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | O.M. Subach;V.N. Malashkevich;W.D. Zencheck;K.S. Morozova;K.D. Piatkevich;S.C. Almo;V.V. Verkhusha | "Structural characterization of acylimine-containing blue and red chromophores in mTagBFP and TagRFP fluorescent proteins", Chem.Biol., 17, 333-341 | 10.1016/j.chembiol.2010.03.005|20416505|2050|1074-5521|CBOLE2 | UK | Crystal structure of tagrfp fluorescent protein | tagrfp;de novo protein;fluorescent proteins;acylimine-containing blue and red chromophores | 3m24(466);9dze(286);8ub6(241);9jv7(87);7r0r(82);8ubg(81);9jvr(75) | 3bx9(479);3bxa(479);3bxb(479);3bxc(479);3h1o(478);3h1r(478);3ip2(477);9cjm(385);1uis(375);3e5v(375);3e5t(374);3e5w(372);1xqm(305);1yzw(303);2ib5(302);2ib6(299);8zxo(285);2c9i(280);9ffi(279);2qli(275);2v4e(274);2qlg(274);2qlh(274);9h25(274);9h26(274);9h27(274);2h5q(273);9fes(273);2vae(271);3kcs(271);3kct(271);2h5o(271);... | 3m24(0.9693999887) | 3h1o(0.9786000252);3bxb(0.9679999948);3ip2(0.9700999856);3e5v(0.959800005);3e5t(0.9639999866);1uis(0.9636999965);3e5w(0.9512000084) | 3m24(466) | 3bx9(479) | 3m24(0.9693999887) | 3h1o(0.9786000252) | 2.40.155.10 | null |
3m24 | 2010-05-26 | other | id:A,B,C,D;type:D;source:synthetic construct;length:236;seq_nat:MSEELIKENMHMKLYMEGTVDNHHFKCTSEGEGKPYEGTQTMRIKVVEGGPLPFAFDILATSFLYGSKTFINHTQGIPDFFKQSFPEGFTWERVTTYEDGGVLTATQDTSLQDGCLIYNVKIRGVNFTSNGPVMQKKTLGWEAFTETLYPADGGLEGRNDMALKLVGGSHLIANIKTTYRSKKPAKNLKMPGVYYVDYRLERIKEANNETYVEQHEVAVARYCDLPSKLGHKLN;seq_unnat:MSEELIKENMH... | 26,423.98 | P 21 21 21 | 82.953|105.943|137.155|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | O.M. Subach;V.N. Malashkevich;W.D. Zencheck;K.S. Morozova;K.D. Piatkevich;S.C. Almo;V.V. Verkhusha | "Structural characterization of acylimine-containing blue and red chromophores in mTagBFP and TagRFP fluorescent proteins", Chem.Biol., 17, 333-341 | 10.1016/j.chembiol.2010.03.005|20416505|2050|1074-5521|CBOLE2 | UK | Crystal structure of tagbfp fluorescent protein | de novo protein;fluorescent proteins;acylimine-containing blue and red chromophores | 3m22(463);9dze(266);8ub6(224);9jv7(78);8ubg(74);7r0r(70);9jvr(67) | 3bx9(460);3bxa(460);3bxb(460);3bxc(460);3h1o(456);3h1r(456);3ip2(455);9cjm(353);3e5v(351);1uis(348);3e5w(348);3e5t(347);1yzw(293);2ib5(291);1xqm(289);2ib6(287);2c9i(271);8zxo(262);2vae(261);2qli(261);2qlg(260);2qlh(260);9fes(260);2v4e(259);2h5o(259);2h5q(259);9ffi(258);3lf3(257);1g7k(257);3kcs(257);3kct(257);8zxh(256);... | 3m22(0.9625999928) | 3h1o(0.97299999);3bxb(0.9682000279);3ip2(0.9654999971);1uis(0.9592999816);3e5t(0.9577999711);3e5v(0.9514999986) | 3m22(463) | 3bx9(460) | 3m22(0.9625999928) | 3h1o(0.97299999) | 2.20.130.10;3.30.1300.40;3.30.1300.30;2.20.210.10 | null |
3ni3 | 2010-09-15 | other | id:A,B,C,D,E,F,G,H,I,J,K,L;type:U;source:unknown;length:12;seq_nat:ATYFTYYSAXKX;seq_unnat:(ORN)TYFTY(4BF)S(ORN)(HAO)K(HAO) | 1,834.755 | P 21 21 21 | 64.045|64.194|64.247|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | O. Khakshoor;A.J. Lin;T.P. Korman;M.R. Sawaya;S.C. Tsai;D. Eisenberg;J.S. Nowick | "X-ray crystallographic structure of an artificial beta-sheet dimer", J.Am.Chem.Soc., 132, 11622-11628 | 10.1021/ja103438w|20669960|0004|0002-7863|JACSAT | US | 54-membered ring macrocyclic beta-sheet peptide | unknown function;artificial beta sheet dimer | null | null | null | null | null | null | 5v64(0.5971000195) | null | null | null |
3o49 | 2010-12-22 | other | id:A;type:D;source:synthetic construct;length:143;seq_nat:HHHHHHFNLPPGNYKKPVLLKSTETGQYLRINPDGTVDGTRDRSDQHIQFQVSPEGGGEVLLKSTETGQYLRINPDGTVDGTRDRSDQHIQFQVSPEGGGEVLLKSTETGQYLRINPDGTVDGTRDRSDQHIQFQVSPEGGG;seq_unnat:HHHHHHFNLPPGNYKKPVLLKSTETGQYLRINPDGTVDGTRDRSDQHIQFQVSPEGGGEVLLKSTETGQYLRINPDGTVDGTRDRSDQHIQFQVSPEGGGEVLLKSTET... | 15,743.063 | I 2 2 2 | 50.365|53.351|85.175|90.00|90.00|90.00 | X-RAY DIFFRACTION | null | J. Lee;M. Blaber | "Experimental support for the evolution of symmetric protein architecture from a simple peptide motif", Proc.Natl.Acad.Sci.USA, 108, 126-130 | 10.1073/pnas.1015032108|21173271|0040|0027-8424|PNASA6 | US | Crystal structure of symfoil-1: de novo designed beta-trefoil architecture with symmetric primary structure | de novo protein;beta-trefoil | 3o4a(306);3o4d(295);3o4b(292);3o4c(291);4qkr(238);4qks(229);4d8h(223);4ow4(206);3ogf(179);3ol0(95) | 1nzk(136);1q03(135);1m16(135);1jt7(133);3fgm(132);1jtc(132);3fjd(132);2hwm(131);2hz9(131);3fji(131);3bao(131);1k5u(130);1k5v(130);3b9u(130);2hwa(130);3bau(130);3bah(130);1jt3(130);1jt5(130);3baq(129);3fj8(129);3fj9(129);3fja(129);3fjc(129);2hw9(129);1pzz(129);3bag(129);3fje(129);2ntd(129);3fjf(129);3fjh(129);1jy0(129);... | 3o4a(0.9898999929);3o4b(0.9944000244);3o4d(0.9902999997);3o4c(0.9930999875) | null | 3o4a(306) | 1nzk(136) | 3o4b(0.9944000244) | 2hz9(0.8488000035) | 2.80.10.50 | null |
3o4a | 2010-12-22 | other | id:A,B,C,D;type:D;source:synthetic construct;length:143;seq_nat:HHHHHHFNLPPGNYKKPVLLKSTETGQYLRINPDGTVDGTRDRSDQHIQFQISPEGGGEVLLKSTETGQYLRINPDGTVDGTRDRSDQHIQFQISPEGGGEVLLKSTETGQYLRINPDGTVDGTRDRSDQHIQFQISPEGGG;seq_unnat:HHHHHHFNLPPGNYKKPVLLKSTETGQYLRINPDGTVDGTRDRSDQHIQFQISPEGGGEVLLKSTETGQYLRINPDGTVDGTRDRSDQHIQFQISPEGGGEVL... | 15,785.144 | P 1 21 1 | 50.701|53.641|85.336|90.00|90.07|90.00 | X-RAY DIFFRACTION | null | J. Lee;M. Blaber | "Experimental support for the evolution of symmetric protein architecture from a simple peptide motif", Proc.Natl.Acad.Sci.USA, 108, 126-130 | 10.1073/pnas.1015032108|21173271|0040|0027-8424|PNASA6 | US | Crystal structure of symfoil-2: de novo designed beta-trefoil architecture with symmetric primary structure | de novo protein;beta-trefoil | 3o49(303);3o4d(296);3o4b(293);3o4c(292);4qkr(239);4qks(231);4d8h(224);4ow4(207);3ogf(180);3ol0(96) | 1nzk(136);1q03(136);1m16(135);1jt7(134);3fgm(132);1jtc(132);3fjd(132);3b9u(131);2hwm(131);2hz9(131);3fji(131);3bao(131);3baq(130);1k5u(130);1k5v(130);3fjc(130);2hwa(130);3bau(130);1pzz(130);3fje(130);3bah(130);1jt3(130);1jt5(130);3fj8(129);3fj9(129);3fja(129);3hom(129);2hw9(129);3bag(129);2ntd(129);3fjf(129);3fjh(129);... | 3o4b(0.9958999753);3o49(0.9890999794);3o4c(0.9880999923);3o4d(0.9911999702) | null | 3o49(303) | 1nzk(136) | 3o4b(0.9958999753) | 3bah(0.8435000181) | 2.80.10.50 | null |
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