Tutorial/Source/LEMS_HH_SingleAP.xml

<Lems>

    <!-- Example with Simple Hodgkin-Huxley cell specifying segment details-->

    <!-- This is a file which can be read and executed by the LEMS Interpreter.
         It imports the LEMS definitions of the core NeuroML 2 Components, 
         imports in "pure" NeuroML 2 and contains some LEMS elements for running 
         a simulation -->


    <Target component="sim1"/>

    <Include file="Cells.xml"/>
    <Include file="Networks.xml"/>
    <Include file="Simulation.xml"/>


    <Include file="HHCellSingleAP.net.nml"/>
    
    <Include file="hhcell.cell.nml"/>
    <Include file="passiveChan.channel.nml"/>
    <Include file="naChan.channel.nml"/>
    <Include file="kChan.channel.nml"/>


    <Simulation id="sim1" length="50ms" step="0.001ms" target="HHCellNetwork">
    
        <Display id="d1" title="Hodgkin-Huxley Neuron: V (mV)" timeScale="1ms" xmin="-5" xmax="55" ymin="-90" ymax="50">
            <Line id="V" quantity="hhpop/0/hhcell/v" scale="1mV" color="#000000" timeScale="1ms"/>
        </Display>

        
        <OutputFile id="of0" fileName="hh_v.dat">
            <OutputColumn id="v" quantity="hhpop/0/hhcell/v"/> 
        </OutputFile>  
    
        
    </Simulation>


</Lems>