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| G.addWidget(Widgets.POPUP); |
| Popup1.setMessage("The <b>Hodgkin-Huxley model</b> is a mathematical model that describes how action potentials in neurons are initiated and propagated. It is a set of nonlinear differential equations that approximates the electrical characteristics of excitable cells such as neurons. <br/><br/>You can run your own simulations of this model by signing up to OSB and logging in. <br/><br/>There is also <a target='_blank' href='http://hodgkin-huxley-tutorial.readthedocs.io/en/latest/'>a tutorial for the HH model</a>, which has been developed as part of the <a target='_blank' href='http://www.openworm.org/'>OpenWorm project</a>."); |
| Popup1.setName("Description"); |
| Popup1.setPosition(1074,142) |
| Popup1.setSize(391.8,454.8) |
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| var Plot1 = G.addWidget(Widgets.PLOT); |
| Plot1.setName("Hodgkin-Huxley Spiking Neuron"); |
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| Plot1.setPosition(120, 90); |
| Plot1.setSize(230,465); |
| Plot1.plotData(HHCellSingleAP.hhpop[0].v); |
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| var Plot2 = G.addWidget(Widgets.PLOT); |
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| Plot2.setName("Gating Variables"); |
| Plot2.setPosition(120,350); |
| Plot2.setSize(285,465) |
| Plot2.plotData(HHCellSingleAP.hhpop[0].bioPhys1.membraneProperties.naChans.naChan.h.q); |
| Plot2.plotData(HHCellSingleAP.hhpop[0].bioPhys1.membraneProperties.naChans.naChan.m.q); |
| Plot2.plotData(HHCellSingleAP.hhpop[0].bioPhys1.membraneProperties.kChans.kChan.n.q); |
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| Plot2.setLegend(HHCellSingleAP.hhpop[0].bioPhys1.membraneProperties.naChans.naChan.h.q,"Sodium h.q"); |
| Plot2.setLegend(HHCellSingleAP.hhpop[0].bioPhys1.membraneProperties.naChans.naChan.m.q,"Sodium m.q"); |
| Plot2.setLegend(HHCellSingleAP.hhpop[0].bioPhys1.membraneProperties.kChans.kChan.n.q,"Potassium n.q"); |
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| Instances.getInstance("HHCellSingleAP.hhpop[0].v"); |
| HHCellSingleAP.hhpop[0].v.setWatched(true); |
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| Instances.getInstance("HHCellSingleAP.hhpop[0].bioPhys1.membraneProperties.naChans.naChan.m.q"); |
| HHCellSingleAP.hhpop[0].bioPhys1.membraneProperties.naChans.naChan.m.q.setWatched(true); |
| Instances.getInstance("HHCellSingleAP.hhpop[0].bioPhys1.membraneProperties.naChans.naChan.h.q"); |
| HHCellSingleAP.hhpop[0].bioPhys1.membraneProperties.naChans.naChan.h.q.setWatched(true); |
| Instances.getInstance("HHCellSingleAP.hhpop[0].bioPhys1.membraneProperties.kChans.kChan.n.q"); |
| HHCellSingleAP.hhpop[0].bioPhys1.membraneProperties.kChans.kChan.n.q.setWatched(true); |
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