pharma-vigilance / data.py
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TASK_DATA = {
"known_signal_easy": {
"reports": [
{
"report_id": "PV-EASY-001",
"patient_age": 59,
"patient_sex": "female",
"drugs": ["Lisinopril 20mg"],
"suspect_drug": "Lisinopril",
"reaction": "Persistent dry cough",
"onset_days": 11,
"severity": "mild",
"outcome": "not_recovered",
"similar_reports_last_30d": 1264,
}
],
"ground_truth": {
"classification": "known_side_effect",
"suspect_drug": "Lisinopril",
"severity_assessment": "mild",
"recommended_action": "log_and_monitor",
},
"drug_interaction_db": {
"Lisinopril": {
"known_reactions": ["dry cough", "hyperkalemia", "angioedema"],
"class_note": "ACE inhibitors frequently cause persistent non-productive cough.",
}
},
},
"cluster_signal_medium": {
"reports": [
{
"report_id": "PV-MED-001",
"patient_age": 44,
"patient_sex": "female",
"drugs": ["Cardiovexa"],
"suspect_drug": "Cardiovexa",
"reaction": "symptomatic bradycardia with dizziness",
"onset_days": 9,
"severity": "moderate",
"outcome": "not_recovered",
"similar_reports_last_30d": 5,
},
{
"report_id": "PV-MED-002",
"patient_age": 69,
"patient_sex": "male",
"drugs": ["Cardiovexa"],
"suspect_drug": "Cardiovexa",
"reaction": "heart rate 32 with near-syncope",
"onset_days": 13,
"severity": "severe",
"outcome": "not_recovered",
"similar_reports_last_30d": 5,
},
{
"report_id": "PV-MED-003",
"patient_age": 57,
"patient_sex": "female",
"drugs": ["Cardiovexa"],
"suspect_drug": "Cardiovexa",
"reaction": "fatigue and sinus bradycardia",
"onset_days": 7,
"severity": "moderate",
"outcome": "not_recovered",
"similar_reports_last_30d": 5,
},
{
"report_id": "PV-MED-004",
"patient_age": 63,
"patient_sex": "male",
"drugs": ["Cardiovexa"],
"suspect_drug": "Cardiovexa",
"reaction": "bradyarrhythmia requiring ER evaluation",
"onset_days": 11,
"severity": "severe",
"outcome": "not_recovered",
"similar_reports_last_30d": 5,
},
],
"ground_truth": {
"classification": "new_signal",
"suspect_drug": "Cardiovexa",
"severity_assessment": "severe",
"recommended_action": "escalate",
},
"drug_interaction_db": {
"Cardiovexa": {
"known_reactions": ["headache", "fatigue"],
"approval_date": "5 months ago",
"label_note": "No labeled conduction or rhythm adverse effects.",
}
},
},
"confounded_hard": {
"reports": [
{
"report_id": "PV-HARD-001",
"patient_age": 63,
"patient_sex": "male",
"drugs": [
"Tacrolimus",
"Prednisone",
"Amlodipine",
"Magnesium oxide",
"Voriconazole",
"Trimethoprim-sulfamethoxazole",
],
"suspect_drug": "Trimethoprim-sulfamethoxazole",
"reaction": "Acute kidney injury with tacrolimus trough 4x baseline",
"onset_days": 6,
"severity": "critical",
"outcome": "not_recovered",
"similar_reports_last_30d": 1,
}
],
"ground_truth": {
"classification": "new_signal",
"suspect_drug": "Tacrolimus+Voriconazole",
"severity_assessment": "critical",
"recommended_action": "escalate",
},
"drug_interaction_db": {
"Voriconazole": {
"strong_metabolic_inhibitor": True,
"interacts_with": ["Tacrolimus", "Cyclosporine"],
"interaction_note": "Markedly increases tacrolimus exposure; dose reduction and level monitoring required.",
},
"Tacrolimus": {
"narrow_therapeutic_index": True,
"known_reactions": ["nephrotoxicity", "tremor"],
"requires_level_monitoring": True,
},
},
},
}