Spaces:
Sleeping
Sleeping
Create static/app.js
Browse files- static/app.js +347 -0
static/app.js
ADDED
|
@@ -0,0 +1,347 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
let currentResults = null;
|
| 2 |
+
let currentBatchResults = null;
|
| 3 |
+
|
| 4 |
+
// 标签页切换
|
| 5 |
+
function switchTab(tabName) {
|
| 6 |
+
// 隐藏所有标签内容
|
| 7 |
+
document.querySelectorAll('.tab-content').forEach(tab => {
|
| 8 |
+
tab.classList.remove('active');
|
| 9 |
+
});
|
| 10 |
+
document.querySelectorAll('.tab-button').forEach(btn => {
|
| 11 |
+
btn.classList.remove('active');
|
| 12 |
+
});
|
| 13 |
+
|
| 14 |
+
// 显示选中的标签
|
| 15 |
+
document.getElementById(tabName + '-tab').classList.add('active');
|
| 16 |
+
event.target.classList.add('active');
|
| 17 |
+
|
| 18 |
+
// 隐藏结果区域
|
| 19 |
+
document.getElementById('results').style.display = 'none';
|
| 20 |
+
document.getElementById('batchResults').style.display = 'none';
|
| 21 |
+
}
|
| 22 |
+
|
| 23 |
+
// 单个基因设计
|
| 24 |
+
document.getElementById('primerForm').addEventListener('submit', async function(e) {
|
| 25 |
+
e.preventDefault();
|
| 26 |
+
|
| 27 |
+
const geneSymbol = document.getElementById('geneSymbol').value.trim();
|
| 28 |
+
const species = document.getElementById('species').value;
|
| 29 |
+
|
| 30 |
+
if (!geneSymbol) {
|
| 31 |
+
alert('请输入基因名称');
|
| 32 |
+
return;
|
| 33 |
+
}
|
| 34 |
+
|
| 35 |
+
// 显示加载状态
|
| 36 |
+
document.getElementById('loading').style.display = 'block';
|
| 37 |
+
document.getElementById('results').style.display = 'none';
|
| 38 |
+
document.getElementById('batchResults').style.display = 'none';
|
| 39 |
+
document.getElementById('submitBtn').disabled = true;
|
| 40 |
+
|
| 41 |
+
try {
|
| 42 |
+
const response = await fetch('/design_primers', {
|
| 43 |
+
method: 'POST',
|
| 44 |
+
headers: {
|
| 45 |
+
'Content-Type': 'application/json',
|
| 46 |
+
},
|
| 47 |
+
body: JSON.stringify({
|
| 48 |
+
gene_symbol: geneSymbol,
|
| 49 |
+
species: species
|
| 50 |
+
})
|
| 51 |
+
});
|
| 52 |
+
|
| 53 |
+
const data = await response.json();
|
| 54 |
+
|
| 55 |
+
if (data.error) {
|
| 56 |
+
showError(data.error);
|
| 57 |
+
} else {
|
| 58 |
+
currentResults = [{ gene: geneSymbol, status: 'success', data: data }];
|
| 59 |
+
showResults(data);
|
| 60 |
+
}
|
| 61 |
+
} catch (error) {
|
| 62 |
+
showError('网络错误,请检查连接后重试');
|
| 63 |
+
} finally {
|
| 64 |
+
document.getElementById('loading').style.display = 'none';
|
| 65 |
+
document.getElementById('submitBtn').disabled = false;
|
| 66 |
+
}
|
| 67 |
+
});
|
| 68 |
+
|
| 69 |
+
// 批量基因设计
|
| 70 |
+
document.getElementById('batchForm').addEventListener('submit', async function(e) {
|
| 71 |
+
e.preventDefault();
|
| 72 |
+
|
| 73 |
+
const batchGenesText = document.getElementById('batchGenes').value.trim();
|
| 74 |
+
const species = document.getElementById('batchSpecies').value;
|
| 75 |
+
|
| 76 |
+
if (!batchGenesText) {
|
| 77 |
+
alert('请输入基因列表');
|
| 78 |
+
return;
|
| 79 |
+
}
|
| 80 |
+
|
| 81 |
+
// 解析基因列表
|
| 82 |
+
const geneList = parseGeneList(batchGenesText);
|
| 83 |
+
|
| 84 |
+
if (geneList.length === 0) {
|
| 85 |
+
alert('未找到有效的基因名称');
|
| 86 |
+
return;
|
| 87 |
+
}
|
| 88 |
+
|
| 89 |
+
// 显示进度条
|
| 90 |
+
document.getElementById('batchProgress').style.display = 'block';
|
| 91 |
+
document.getElementById('results').style.display = 'none';
|
| 92 |
+
document.getElementById('batchResults').style.display = 'none';
|
| 93 |
+
document.getElementById('batchSubmitBtn').disabled = true;
|
| 94 |
+
|
| 95 |
+
try {
|
| 96 |
+
const response = await fetch('/batch_design_primers', {
|
| 97 |
+
method: 'POST',
|
| 98 |
+
headers: {
|
| 99 |
+
'Content-Type': 'application/json',
|
| 100 |
+
},
|
| 101 |
+
body: JSON.stringify({
|
| 102 |
+
gene_list: geneList,
|
| 103 |
+
species: species
|
| 104 |
+
})
|
| 105 |
+
});
|
| 106 |
+
|
| 107 |
+
const data = await response.json();
|
| 108 |
+
currentBatchResults = data.results;
|
| 109 |
+
showBatchResults(data.results);
|
| 110 |
+
|
| 111 |
+
} catch (error) {
|
| 112 |
+
showError('网络错误,请检查连接后重试');
|
| 113 |
+
} finally {
|
| 114 |
+
document.getElementById('batchProgress').style.display = 'none';
|
| 115 |
+
document.getElementById('batchSubmitBtn').disabled = false;
|
| 116 |
+
}
|
| 117 |
+
});
|
| 118 |
+
|
| 119 |
+
function parseGeneList(text) {
|
| 120 |
+
// 支持多种分隔符:换行、逗号、空格
|
| 121 |
+
return text
|
| 122 |
+
.split(/[\n,\s]+/)
|
| 123 |
+
.map(gene => gene.trim())
|
| 124 |
+
.filter(gene => gene.length > 0);
|
| 125 |
+
}
|
| 126 |
+
|
| 127 |
+
function showError(message) {
|
| 128 |
+
document.getElementById('results').innerHTML = `
|
| 129 |
+
<div class="error">
|
| 130 |
+
❌ ${message}
|
| 131 |
+
</div>
|
| 132 |
+
`;
|
| 133 |
+
document.getElementById('results').style.display = 'block';
|
| 134 |
+
}
|
| 135 |
+
|
| 136 |
+
function showResults(data) {
|
| 137 |
+
const geneInfo = data.gene_info;
|
| 138 |
+
const primers = data.primers;
|
| 139 |
+
|
| 140 |
+
// 显示基因信息
|
| 141 |
+
document.getElementById('geneInfo').innerHTML = `
|
| 142 |
+
<h3>📋 基因信息</h3>
|
| 143 |
+
<p><strong>基因名称:</strong> ${geneInfo.symbol}</p>
|
| 144 |
+
<p><strong>RefSeq ID:</strong> ${geneInfo.nm_id}</p>
|
| 145 |
+
<p><strong>外显子交界点:</strong> ${geneInfo.junctions.join(', ')}</p>
|
| 146 |
+
`;
|
| 147 |
+
|
| 148 |
+
// 显示引物结果
|
| 149 |
+
let primerHtml = '<h3>🎯 推荐引物序列</h3>';
|
| 150 |
+
|
| 151 |
+
primers.forEach(primer => {
|
| 152 |
+
primerHtml += `
|
| 153 |
+
<div class="primer-card">
|
| 154 |
+
<div class="primer-header">
|
| 155 |
+
<span class="primer-id">引物对 ${primer.id}</span>
|
| 156 |
+
<span class="product-size">${primer.product_size} bp</span>
|
| 157 |
+
</div>
|
| 158 |
+
|
| 159 |
+
<div class="primer-sequences">
|
| 160 |
+
<div class="sequence-box">
|
| 161 |
+
<div class="sequence-label">正向引物 (Forward)</div>
|
| 162 |
+
<div class="sequence">${primer.forward}</div>
|
| 163 |
+
</div>
|
| 164 |
+
<div class="sequence-box">
|
| 165 |
+
<div class="sequence-label">反向引物 (Reverse)</div>
|
| 166 |
+
<div class="sequence">${primer.reverse}</div>
|
| 167 |
+
</div>
|
| 168 |
+
</div>
|
| 169 |
+
|
| 170 |
+
<div class="tm-info">
|
| 171 |
+
<span>正向Tm: ${primer.f_tm}°C</span>
|
| 172 |
+
<span>反向Tm: ${primer.r_tm}°C</span>
|
| 173 |
+
<span>${primer.junction_info}</span>
|
| 174 |
+
</div>
|
| 175 |
+
</div>
|
| 176 |
+
`;
|
| 177 |
+
});
|
| 178 |
+
|
| 179 |
+
document.getElementById('primerResults').innerHTML = primerHtml;
|
| 180 |
+
document.getElementById('exportSection').style.display = 'block';
|
| 181 |
+
document.getElementById('results').style.display = 'block';
|
| 182 |
+
}
|
| 183 |
+
|
| 184 |
+
function showBatchResults(results) {
|
| 185 |
+
const successCount = results.filter(r => r.status === 'success').length;
|
| 186 |
+
const failedCount = results.filter(r => r.status === 'failed').length;
|
| 187 |
+
const totalPrimers = results
|
| 188 |
+
.filter(r => r.status === 'success')
|
| 189 |
+
.reduce((sum, r) => sum + r.data.primers.length, 0);
|
| 190 |
+
|
| 191 |
+
// 显示统计信息
|
| 192 |
+
document.getElementById('resultSummary').innerHTML = `
|
| 193 |
+
<div class="summary-stats">
|
| 194 |
+
<div class="stat-item">
|
| 195 |
+
<div class="stat-number">${results.length}</div>
|
| 196 |
+
<div class="stat-label">总基因数</div>
|
| 197 |
+
</div>
|
| 198 |
+
<div class="stat-item">
|
| 199 |
+
<div class="stat-number">${successCount}</div>
|
| 200 |
+
<div class="stat-label">成功设计</div>
|
| 201 |
+
</div>
|
| 202 |
+
<div class="stat-item">
|
| 203 |
+
<div class="stat-number">${failedCount}</div>
|
| 204 |
+
<div class="stat-label">设计失败</div>
|
| 205 |
+
</div>
|
| 206 |
+
<div class="stat-item">
|
| 207 |
+
<div class="stat-number">${totalPrimers}</div>
|
| 208 |
+
<div class="stat-label">引物对总数</div>
|
| 209 |
+
</div>
|
| 210 |
+
</div>
|
| 211 |
+
`;
|
| 212 |
+
|
| 213 |
+
// 显示失败的基因
|
| 214 |
+
const failedGenes = results.filter(r => r.status === 'failed');
|
| 215 |
+
if (failedGenes.length > 0) {
|
| 216 |
+
let failedHtml = '<div class="failed-genes"><h4>⚠️ 设计失败的基因</h4>';
|
| 217 |
+
failedGenes.forEach(gene => {
|
| 218 |
+
failedHtml += `
|
| 219 |
+
<div class="failed-gene">
|
| 220 |
+
<strong>${gene.gene}:</strong> ${gene.error}
|
| 221 |
+
</div>
|
| 222 |
+
`;
|
| 223 |
+
});
|
| 224 |
+
failedHtml += '</div>';
|
| 225 |
+
document.getElementById('failedGenes').innerHTML = failedHtml;
|
| 226 |
+
} else {
|
| 227 |
+
document.getElementById('failedGenes').innerHTML = '';
|
| 228 |
+
}
|
| 229 |
+
|
| 230 |
+
// 显示成功的引物结果
|
| 231 |
+
let primerHtml = '<h3>🎯 批量引物设计结果</h3>';
|
| 232 |
+
|
| 233 |
+
results.filter(r => r.status === 'success').forEach(result => {
|
| 234 |
+
const geneInfo = result.data.gene_info;
|
| 235 |
+
const primers = result.data.primers;
|
| 236 |
+
|
| 237 |
+
primerHtml += `<div style="margin-bottom: 40px; border: 2px solid #e1e5e9; border-radius: 8px; padding: 20px;">`;
|
| 238 |
+
primerHtml += `<h4 style="color: #4facfe; margin-bottom: 15px;">📋 ${geneInfo.symbol} (${geneInfo.nm_id})</h4>`;
|
| 239 |
+
|
| 240 |
+
primers.forEach(primer => {
|
| 241 |
+
primerHtml += `
|
| 242 |
+
<div class="primer-card">
|
| 243 |
+
<div class="primer-header">
|
| 244 |
+
<span class="primer-id">引物对 ${primer.id}</span>
|
| 245 |
+
<span class="product-size">${primer.product_size} bp</span>
|
| 246 |
+
</div>
|
| 247 |
+
|
| 248 |
+
<div class="primer-sequences">
|
| 249 |
+
<div class="sequence-box">
|
| 250 |
+
<div class="sequence-label">正向引物 (Forward)</div>
|
| 251 |
+
<div class="sequence">${primer.forward}</div>
|
| 252 |
+
</div>
|
| 253 |
+
<div class="sequence-box">
|
| 254 |
+
<div class="sequence-label">反向引物 (Reverse)</div>
|
| 255 |
+
<div class="sequence">${primer.reverse}</div>
|
| 256 |
+
</div>
|
| 257 |
+
</div>
|
| 258 |
+
|
| 259 |
+
<div class="tm-info">
|
| 260 |
+
<span>正向Tm: ${primer.f_tm}°C</span>
|
| 261 |
+
<span>反向Tm: ${primer.r_tm}°C</span>
|
| 262 |
+
<span>${primer.junction_info}</span>
|
| 263 |
+
</div>
|
| 264 |
+
</div>
|
| 265 |
+
`;
|
| 266 |
+
});
|
| 267 |
+
|
| 268 |
+
primerHtml += '</div>';
|
| 269 |
+
});
|
| 270 |
+
|
| 271 |
+
document.getElementById('batchPrimerResults').innerHTML = primerHtml;
|
| 272 |
+
document.getElementById('batchResults').style.display = 'block';
|
| 273 |
+
}
|
| 274 |
+
|
| 275 |
+
// 导出单个结果
|
| 276 |
+
async function exportResults(format) {
|
| 277 |
+
if (!currentResults) {
|
| 278 |
+
alert('没有可导出的结果');
|
| 279 |
+
return;
|
| 280 |
+
}
|
| 281 |
+
|
| 282 |
+
try {
|
| 283 |
+
const response = await fetch('/export_primers', {
|
| 284 |
+
method: 'POST',
|
| 285 |
+
headers: {
|
| 286 |
+
'Content-Type': 'application/json',
|
| 287 |
+
},
|
| 288 |
+
body: JSON.stringify({
|
| 289 |
+
format: format,
|
| 290 |
+
data: currentResults
|
| 291 |
+
})
|
| 292 |
+
});
|
| 293 |
+
|
| 294 |
+
if (response.ok) {
|
| 295 |
+
const blob = await response.blob();
|
| 296 |
+
const url = window.URL.createObjectURL(blob);
|
| 297 |
+
const a = document.createElement('a');
|
| 298 |
+
a.href = url;
|
| 299 |
+
a.download = response.headers.get('Content-Disposition')?.split('filename=')[1] || `primers.${format}`;
|
| 300 |
+
document.body.appendChild(a);
|
| 301 |
+
a.click();
|
| 302 |
+
window.URL.revokeObjectURL(url);
|
| 303 |
+
document.body.removeChild(a);
|
| 304 |
+
} else {
|
| 305 |
+
alert('导出失败,请重试');
|
| 306 |
+
}
|
| 307 |
+
} catch (error) {
|
| 308 |
+
alert('导出失败:' + error.message);
|
| 309 |
+
}
|
| 310 |
+
}
|
| 311 |
+
|
| 312 |
+
// 导出批量结果
|
| 313 |
+
async function exportBatchResults(format) {
|
| 314 |
+
if (!currentBatchResults) {
|
| 315 |
+
alert('没有可导出的结果');
|
| 316 |
+
return;
|
| 317 |
+
}
|
| 318 |
+
|
| 319 |
+
try {
|
| 320 |
+
const response = await fetch('/export_primers', {
|
| 321 |
+
method: 'POST',
|
| 322 |
+
headers: {
|
| 323 |
+
'Content-Type': 'application/json',
|
| 324 |
+
},
|
| 325 |
+
body: JSON.stringify({
|
| 326 |
+
format: format,
|
| 327 |
+
data: currentBatchResults
|
| 328 |
+
})
|
| 329 |
+
});
|
| 330 |
+
|
| 331 |
+
if (response.ok) {
|
| 332 |
+
const blob = await response.blob();
|
| 333 |
+
const url = window.URL.createObjectURL(blob);
|
| 334 |
+
const a = document.createElement('a');
|
| 335 |
+
a.href = url;
|
| 336 |
+
a.download = response.headers.get('Content-Disposition')?.split('filename=')[1] || `batch_primers.${format}`;
|
| 337 |
+
document.body.appendChild(a);
|
| 338 |
+
a.click();
|
| 339 |
+
window.URL.revokeObjectURL(url);
|
| 340 |
+
document.body.removeChild(a);
|
| 341 |
+
} else {
|
| 342 |
+
alert('导出失败,请重试');
|
| 343 |
+
}
|
| 344 |
+
} catch (error) {
|
| 345 |
+
alert('导出失败:' + error.message);
|
| 346 |
+
}
|
| 347 |
+
}
|