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The dataset generation failed
Error code: DatasetGenerationError
Exception: ArrowNotImplementedError
Message: Cannot write struct type '_format_kwargs' with no child field to Parquet. Consider adding a dummy child field.
Traceback: Traceback (most recent call last):
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 2011, in _prepare_split_single
writer.write_table(table)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 583, in write_table
self._build_writer(inferred_schema=pa_table.schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 404, in _build_writer
self.pa_writer = self._WRITER_CLASS(self.stream, schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/pyarrow/parquet/core.py", line 1010, in __init__
self.writer = _parquet.ParquetWriter(
File "pyarrow/_parquet.pyx", line 2157, in pyarrow._parquet.ParquetWriter.__cinit__
File "pyarrow/error.pxi", line 154, in pyarrow.lib.pyarrow_internal_check_status
File "pyarrow/error.pxi", line 91, in pyarrow.lib.check_status
pyarrow.lib.ArrowNotImplementedError: Cannot write struct type '_format_kwargs' with no child field to Parquet. Consider adding a dummy child field.
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 2027, in _prepare_split_single
num_examples, num_bytes = writer.finalize()
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 602, in finalize
self._build_writer(self.schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 404, in _build_writer
self.pa_writer = self._WRITER_CLASS(self.stream, schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/pyarrow/parquet/core.py", line 1010, in __init__
self.writer = _parquet.ParquetWriter(
File "pyarrow/_parquet.pyx", line 2157, in pyarrow._parquet.ParquetWriter.__cinit__
File "pyarrow/error.pxi", line 154, in pyarrow.lib.pyarrow_internal_check_status
File "pyarrow/error.pxi", line 91, in pyarrow.lib.check_status
pyarrow.lib.ArrowNotImplementedError: Cannot write struct type '_format_kwargs' with no child field to Parquet. Consider adding a dummy child field.
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1529, in compute_config_parquet_and_info_response
parquet_operations = convert_to_parquet(builder)
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1154, in convert_to_parquet
builder.download_and_prepare(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1027, in download_and_prepare
self._download_and_prepare(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1122, in _download_and_prepare
self._prepare_split(split_generator, **prepare_split_kwargs)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1882, in _prepare_split
for job_id, done, content in self._prepare_split_single(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 2038, in _prepare_split_single
raise DatasetGenerationError("An error occurred while generating the dataset") from e
datasets.exceptions.DatasetGenerationError: An error occurred while generating the datasetNeed help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.
_data_files list | _fingerprint string | _format_columns sequence | _format_kwargs dict | _format_type null | _output_all_columns bool | _split null |
|---|---|---|---|---|---|---|
[
{
"filename": "data-00000-of-00001.arrow"
}
] | 111fc0cbf1374091 | [
"answers.answer_start",
"answers.text",
"context",
"feat_answer_category",
"feat_answer_end",
"feat_answer_id",
"feat_document_id",
"feat_file_name",
"feat_question_id",
"question"
] | {} | null | false | null |
AutoTrain Dataset for project: entericdisease50articlefinetune
Dataset Description
This dataset has been automatically processed by AutoTrain for project entericdisease50articlefinetune.
Languages
The BCP-47 code for the dataset's language is unk.
Dataset Structure
Data Instances
A sample from this dataset looks as follows:
[
{
"context": "\ufeff\n\nNew Role for the ibeA Gene in H2O2 Stress Resistance of\nEscherichia coli\nMaud Fl\u00e9chard,a,b M\u00e9lanie A. M. Cortes,a,b Maryline R\u00e9p\u00e9rant,a,b and Pierre Germona,b\nINRA, UMR 1282 Infectiologie et Sant\u00e9 Publique, Nouzilly, France,a and Universit\u00e9 Fran\u00e7ois Rabelais, UMR 1282, Tours, Franceb\n\nibeA is a virulence factor found in",
"question": "What genes are mentioned in this article",
"answers.text": [
"ibeA"
],
"answers.answer_start": [
20
],
"feat_answer_id": [
798798
],
"feat_document_id": [
1442778
],
"feat_question_id": [
915217
],
"feat_answer_end": [
24.0
],
"feat_answer_category": [
null
],
"feat_file_name": [
"53_JB.00089-12.txt"
]
},
{
"context": "\ufeffInternational Journal of Food Microbiology 166 (2013) 65\u201371\n\n\n\n\n\n\n\n\n\n\nLoss of cAMP/CRP regulation confers extreme high hydrostatic pressure resistance in Escherichia coli O157:H7\nDietrich Vanlint, Brecht J.Y. Pype, Nele Rutten, Kristof G.A. Vanoirbeek, Chris W. Michiels, Abram Aertsen \u204e\nLaboratory of Food Microbiology and Leuven Food Science and Nutrition Research Centre (LFoRCe), De",
"question": "What genes are mentioned in this article",
"answers.text": [
"CRP"
],
"answers.answer_start": [
84
],
"feat_answer_id": [
798875
],
"feat_document_id": [
1442807
],
"feat_question_id": [
915217
],
"feat_answer_end": [
87.0
],
"feat_answer_category": [
null
],
"feat_file_name": [
"82_1-s2.0-S0168160513003115-main.txt"
]
}
]
Dataset Fields
The dataset has the following fields (also called "features"):
{
"context": "Value(dtype='string', id=None)",
"question": "Value(dtype='string', id=None)",
"answers.text": "Sequence(feature=Value(dtype='string', id=None), length=-1, id=None)",
"answers.answer_start": "Sequence(feature=Value(dtype='int32', id=None), length=-1, id=None)",
"feat_answer_id": "Sequence(feature=Value(dtype='int64', id=None), length=-1, id=None)",
"feat_document_id": "Sequence(feature=Value(dtype='int64', id=None), length=-1, id=None)",
"feat_question_id": "Sequence(feature=Value(dtype='int64', id=None), length=-1, id=None)",
"feat_answer_end": "Sequence(feature=Value(dtype='float64', id=None), length=-1, id=None)",
"feat_answer_category": "Sequence(feature=Value(dtype='string', id=None), length=-1, id=None)",
"feat_file_name": "Sequence(feature=Value(dtype='string', id=None), length=-1, id=None)"
}
Dataset Splits
This dataset is split into a train and validation split. The split sizes are as follow:
| Split name | Num samples |
|---|---|
| train | 80 |
| valid | 20 |
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