Datasets:
CHR int64 1 22 | SNP large_stringlengths 3 16 | BP int64 8.55k 249M | A1 large_stringclasses 4
values | A2 large_stringclasses 4
values | FRQ_A_53660 float64 0.01 0.99 ⌀ | FRQ_U_2044417 float64 0.01 0.99 ⌀ | INFO float64 0.8 1.01 | BETA float64 -0.18 0.18 ⌀ | SE float64 0.01 0.09 | P float64 0 1 | ngt int64 0 12 | Direction large_stringlengths 9 28 | HetISqt float64 0 84.4 | HetDf int64 0 27 | HetPVa float64 0 1 | Nca int64 4.42k 53.7k | Nco int64 56.1k 2.04M | Neff int64 117k 193k ⌀ | FRQ_A_22717 float64 0.01 0.99 ⌀ | FRQ_U_988884 float64 0.01 0.99 ⌀ | OR float64 0.78 1.31 ⌀ | Neff_half float64 5.4k 38.2k ⌀ | FRQ_A_23493 float64 0.01 0.99 ⌀ | FRQ_U_1114613 float64 0.01 0.99 ⌀ |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
11 | rs78587207 | 57,654,991 | T | G | 0.681 | 0.677 | 0.987 | -0.049001 | 0.0071 | 0 | 0 | --?+---++--------??-?----?-- | 0 | 22 | 0.4595 | 52,271 | 2,003,835 | 188,574 | null | null | null | null | null | null |
8 | rs13262595 | 143,316,970 | G | A | 0.552 | 0.561 | 0.989 | -0.044401 | 0.0066 | 0 | 0 | ++++-++++-+++-+-+-++-+-++?-+ | 28.9 | 26 | 0.08193 | 53,608 | 2,042,771 | 193,172 | null | null | null | null | null | null |
6 | rs4990036 | 31,323,506 | T | C | 0.119 | 0.123 | 0.985 | -0.0727 | 0.0108 | 0 | 0 | --------??+--+--+??-+-----+- | 0 | 23 | 0.9888 | 52,206 | 1,780,004 | 187,807 | null | null | null | null | null | null |
12 | rs10877425 | 60,751,330 | G | A | 0.513 | 0.516 | 0.985 | -0.048602 | 0.0072 | 0 | 0 | ++?+--+??+++++?++??+?++-+--- | 29.1 | 20 | 0.1048 | 45,363 | 1,188,432 | 161,216 | null | null | null | null | null | null |
3 | rs7626445 | 49,114,544 | T | C | 0.647 | 0.654 | 0.994 | -0.045897 | 0.0068 | 0 | 0 | ----?+++-+-------??+?----+-- | 0 | 23 | 0.9577 | 53,206 | 2,042,736 | 192,250 | null | null | null | null | null | null |
3 | rs2564930 | 53,017,307 | T | C | 0.339 | 0.345 | 0.988 | -0.046505 | 0.007 | 0 | 0 | --?+-----+---+-++??-?------- | 27 | 23 | 0.1113 | 52,323 | 2,005,481 | 188,776 | null | null | null | null | null | null |
6 | rs17693963 | 27,710,165 | C | A | 0.0891 | 0.0887 | 1 | -0.077302 | 0.0119 | 0 | 9 | ++-+++++-++++-++-----++++--- | 0 | 27 | 0.8998 | 53,660 | 2,044,417 | 193,374 | null | null | null | null | null | null |
15 | rs4702 | 91,426,560 | G | A | 0.455 | 0.449 | 0.984 | 0.040604 | 0.0066 | 0 | 7 | --?+--+--++--+---+--+--+-?+? | 3.1 | 24 | 0.4185 | 52,541 | 2,002,232 | 189,014 | null | null | null | null | null | null |
4 | rs35518360 | 103,146,890 | T | A | 0.0828 | 0.0756 | 0.947 | 0.073 | 0.0121 | 0 | 0 | -+?----+--+------??-?---+?-- | 0 | 22 | 0.5608 | 52,271 | 2,003,835 | 188,574 | null | null | null | null | null | null |
14 | rs4904738 | 42,179,732 | T | C | 0.558 | 0.553 | 0.984 | -0.040301 | 0.0067 | 0 | 0 | --?---+----+------?---++-+-- | 2.6 | 25 | 0.426 | 52,590 | 2,005,748 | 189,310 | null | null | null | null | null | null |
5 | rs254779 | 88,019,629 | T | C | 0.419 | 0.421 | 0.988 | -0.040197 | 0.0067 | 0 | 0 | -------+-----+-+-??+-------- | 0 | 25 | 0.6637 | 53,549 | 2,044,306 | 193,152 | null | null | null | null | null | null |
8 | rs2198140 | 35,039,646 | T | C | 0.496 | 0.513 | 0.979 | -0.041896 | 0.007 | 0 | 0 | -----+-------+?-+-+----+-++- | 0 | 26 | 0.9109 | 48,531 | 1,621,557 | 173,104 | null | null | null | null | null | null |
5 | rs12516488 | 45,203,199 | G | A | 0.825 | 0.826 | 0.994 | 0.0517 | 0.0088 | 0 | 0 | ---+-+--?-+-------++++-+--+- | 0 | 26 | 0.7313 | 52,601 | 1,846,307 | 189,161 | null | null | null | null | null | null |
5 | rs3899258 | 50,256,551 | G | A | 0.782 | 0.792 | 0.989 | 0.049599 | 0.0085 | 0 | 0 | --+----+--+--+?-----+--+++-- | 0 | 26 | 0.711 | 48,531 | 1,621,557 | 173,104 | null | null | null | null | null | null |
17 | rs3027160 | 8,057,572 | T | C | 0.775 | 0.782 | 0.996 | 0.048504 | 0.0083 | 0 | 0 | ++++-+++++++++?++??-?+++-?++ | 0 | 22 | 0.9778 | 48,156 | 1,619,588 | 172,256 | null | null | null | null | null | null |
2 | rs203768 | 200,901,427 | T | C | 0.824 | 0.817 | 0.992 | -0.049905 | 0.0086 | 0 | 7 | -+-------++-+---??-?-+---++ | 9.1 | 23 | 0.3348 | 52,931 | 2,042,725 | 191,475 | null | null | null | null | null | null |
1 | rs11263940 | 37,182,486 | T | C | 0.689 | 0.69 | 0.991 | -0.043095 | 0.0074 | 0 | 0 | -++-+---+----+?-----------++ | 23.2 | 26 | 0.1382 | 48,531 | 1,621,557 | 173,104 | null | null | null | null | null | null |
5 | rs67839857 | 91,013,369 | G | A | 0.692 | 0.691 | 0.994 | 0.041401 | 0.0072 | 0 | 0 | -------?-+-------++++---+-++ | 0 | 26 | 0.8247 | 52,888 | 1,848,338 | 190,298 | null | null | null | null | null | null |
20 | rs1555466 | 20,965,369 | T | C | 0.218 | 0.224 | 0.996 | 0.047799 | 0.0083 | 0 | 0 | +++++---++++++?+++++-++--?++ | 13.4 | 25 | 0.2694 | 48,479 | 1,619,911 | 172,902 | null | null | null | null | null | null |
7 | rs9886111 | 88,418,451 | G | C | 0.701 | 0.711 | 0.992 | -0.040999 | 0.0071 | 0 | 0 | +++-+++++-+++++-+??+?+-++-+- | 38.4 | 24 | 0.02741 | 53,337 | 2,044,094 | 192,728 | null | null | null | null | null | null |
6 | rs10447393 | 29,316,852 | T | C | 0.362 | 0.354 | 0.997 | -0.039802 | 0.0069 | 0 | 0 | --++-----?---?---????----++- | 32.3 | 21 | 0.0734 | 51,963 | 1,974,686 | 189,191 | null | null | null | null | null | null |
2 | rs9287859 | 166,450,259 | G | A | 0.39 | 0.39 | 0.994 | -0.041301 | 0.0072 | 0 | 0 | ++?++-++--++++?++-++-++-+?-? | 0 | 23 | 0.5476 | 47,412 | 1,579,372 | 168,744 | null | null | null | null | null | null |
6 | rs9265954 | 31,315,339 | T | C | 0.11 | 0.109 | 0.995 | -0.072001 | 0.0127 | 0 | 0 | -??-+?--+?????-??+??+?-?-??? | 0 | 10 | 0.5648 | 38,541 | 1,750,782 | 148,011 | null | null | null | null | null | null |
4 | rs2087319 | 56,461,365 | C | A | 0.74 | 0.744 | 0.968 | -0.043002 | 0.0076 | 0 | 1 | ++?+++-+-++-+-+++-++++--?--+ | 0 | 25 | 0.5962 | 52,506 | 2,005,278 | 188,980 | null | null | null | null | null | null |
2 | rs11125759 | 58,913,399 | G | A | 0.569 | 0.556 | 0.991 | -0.039802 | 0.0071 | 0 | 0 | ++?+--+-+++++-?++-++++++++++ | 0 | 25 | 0.8819 | 47,517 | 1,582,944 | 169,152 | null | null | null | null | null | null |
9 | rs6474628 | 11,080,045 | T | G | 0.579 | 0.585 | 0.999 | 0.037199 | 0.0066 | 0 | 0 | +-+++-+-+-+++-+++??+-+++++-- | 0 | 25 | 0.5655 | 53,549 | 2,044,306 | 193,152 | null | null | null | null | null | null |
7 | rs11768238 | 135,227,513 | G | A | 0.661 | 0.661 | 0.998 | -0.040697 | 0.0073 | 0 | 11 | ++-+?+++++-+++?+++--?---+?-- | 25.6 | 23 | 0.1254 | 48,136 | 1,618,341 | 172,000 | null | null | null | null | null | null |
6 | rs9479138 | 152,215,199 | T | G | 0.339 | 0.34 | 0.975 | 0.038903 | 0.007 | 0 | 0 | ++?-++-++++-+++++++---+++--+ | 0 | 26 | 0.7396 | 52,646 | 2,005,804 | 189,422 | null | null | null | null | null | null |
4 | rs1567288 | 98,582,985 | G | A | 0.548 | 0.55 | 0.981 | -0.036405 | 0.0066 | 0 | 0 | +-++++?-++++++++++++++-+-+++ | 12.7 | 26 | 0.2762 | 53,465 | 2,044,213 | 192,975 | null | null | null | null | null | null |
3 | rs4831130 | 116,039,842 | T | G | 0.753 | 0.74 | 0.984 | 0.041804 | 0.0076 | 0 | 8 | +++-++++++-++++--+?++++++-++ | 0 | 26 | 0.8504 | 53,604 | 2,044,361 | 193,262 | null | null | null | null | null | null |
3 | rs17718444 | 71,499,401 | T | C | 0.323 | 0.32 | 0.984 | -0.038502 | 0.007 | 0 | 0 | --+-+--+-++--+-+------+-++-+ | 23.5 | 27 | 0.1313 | 53,660 | 2,044,417 | 193,374 | null | null | null | null | null | null |
1 | rs6660196 | 168,874,798 | T | G | 0.638 | 0.642 | 0.989 | 0.0395 | 0.0072 | 0 | 7 | ++-+-+-+--+++-?-+--+++--++++ | 35.7 | 26 | 0.03545 | 48,531 | 1,621,557 | 173,104 | null | null | null | null | null | null |
20 | rs4931 | 43,530,234 | C | A | 0.278 | 0.279 | 0.993 | -0.039895 | 0.0073 | 0 | 0 | +++++-+++++++++++?++++-++?-+ | 0 | 25 | 0.9836 | 53,553 | 2,042,716 | 193,062 | null | null | null | null | null | null |
22 | rs138354 | 41,272,143 | T | C | 0.471 | 0.482 | 0.997 | -0.035596 | 0.0065 | 0 | 12 | -+---++---+------??-?--++--+ | 8.1 | 24 | 0.3473 | 53,337 | 2,044,094 | 192,728 | null | null | null | null | null | null |
4 | rs80188901 | 119,500,014 | T | C | 0.0547 | 0.054 | 0.979 | 0.0787 | 0.0145 | 0 | 1 | ++++?+++++-++-+++-+-?+-++??? | 11.6 | 22 | 0.3021 | 53,138 | 2,037,640 | 191,781 | null | null | null | null | null | null |
12 | rs12321526 | 61,166,811 | T | C | 0.599 | 0.593 | 0.979 | 0.036698 | 0.0068 | 0 | 0 | ++++++-++++++++-+-+--+-+++-+ | 0 | 27 | 0.9975 | 53,660 | 2,044,417 | 193,374 | null | null | null | null | null | null |
9 | rs643228 | 127,834,878 | G | A | 0.441 | 0.428 | 0.991 | -0.0357 | 0.0066 | 0 | 4 | +++-?++-+++++-++++-+++-++-+- | 0 | 26 | 0.4877 | 53,529 | 2,043,059 | 192,896 | null | null | null | null | null | null |
16 | rs2042395 | 87,446,053 | G | A | 0.247 | 0.246 | 0.977 | 0.041698 | 0.0077 | 0 | 1 | --?+?-+--------++??-?-+--+-- | 0 | 22 | 0.5565 | 52,192 | 2,004,123 | 188,298 | null | null | null | null | null | null |
17 | rs62078384 | 47,044,463 | T | C | 0.524 | 0.516 | 0.981 | 0.035801 | 0.0066 | 0 | 0 | ++++?-+-+-+++-++--?++---??++ | 19.1 | 23 | 0.2004 | 53,281 | 2,040,831 | 192,140 | null | null | null | null | null | null |
13 | rs7336194 | 97,494,652 | G | C | 0.62 | 0.626 | 0.997 | 0.039798 | 0.0074 | 0 | 0 | -+--+-+-?--?--?+--++??+-?-++ | 15.9 | 21 | 0.248 | 44,205 | 1,415,159 | 159,630 | null | null | null | null | null | null |
9 | rs10818864 | 126,502,619 | T | G | 0.703 | 0.692 | 0.986 | -0.038304 | 0.0072 | 0 | 0 | ---+---+-+--+--+--------+--+ | 15.5 | 27 | 0.2338 | 53,660 | 2,044,417 | 193,374 | null | null | null | null | null | null |
2 | rs7562330 | 22,861,495 | T | C | 0.641 | 0.636 | 0.985 | -0.036498 | 0.0068 | 0 | 0 | -+----+--+-----+-??+?--++++- | 0 | 24 | 0.8977 | 53,337 | 2,044,094 | 192,728 | null | null | null | null | null | null |
3 | rs6792379 | 81,637,845 | G | A | 0.455 | 0.452 | 0.989 | -0.034995 | 0.0066 | 0 | 0 | +-+++-++++-++-++++++++++--++ | 0 | 27 | 0.5769 | 53,660 | 2,044,417 | 193,374 | null | null | null | null | null | null |
2 | rs10185238 | 130,231,345 | G | A | 0.284 | 0.287 | 0.988 | 0.040604 | 0.0077 | 0 | 9 | -+-+--+--+---+?------+----+- | 7.3 | 26 | 0.3568 | 48,531 | 1,621,557 | 173,104 | null | null | null | null | null | null |
6 | rs858977 | 27,159,570 | C | A | 0.403 | 0.405 | 0.992 | -0.0357 | 0.0068 | 0 | 0 | ++?++++-++-++-+++?---+++-++- | 23.1 | 25 | 0.1438 | 52,591 | 2,005,749 | 189,312 | null | null | null | null | null | null |
6 | rs9268671 | 32,414,290 | G | A | 0.684 | 0.672 | 0.998 | 0.038403 | 0.0073 | 0 | 1 | ----+----?+--?---+???-----+- | 0 | 22 | 0.9279 | 52,018 | 1,974,741 | 189,301 | null | null | null | null | null | null |
2 | rs522939 | 23,840,037 | G | A | 0.21 | 0.209 | 0.966 | -0.043002 | 0.0082 | 0 | 0 | ++++-+++++-++-++---++--+-?-+ | 0 | 26 | 0.9697 | 53,608 | 2,042,771 | 193,172 | null | null | null | null | null | null |
3 | rs13324950 | 48,762,409 | T | A | 0.878 | 0.882 | 0.993 | -0.051904 | 0.0099 | 0 | 0 | +-+---+++-+++++-++++-+-++-++ | 0 | 27 | 0.6941 | 53,660 | 2,044,417 | 193,374 | null | null | null | null | null | null |
6 | rs2523623 | 31,315,729 | T | C | 0.419 | 0.418 | 0.997 | -0.037795 | 0.0072 | 0 | 0 | --+-+--?-?---??+-+--+---+--+ | 0 | 23 | 0.7907 | 47,371 | 1,357,093 | 168,500 | null | null | null | null | null | null |
16 | rs62042812 | 64,528,348 | G | A | 0.122 | 0.118 | 0.991 | 0.0519 | 0.0099 | 0 | 0 | ----+++-+--------++--+---+-- | 0 | 27 | 0.5481 | 53,660 | 2,044,417 | 193,374 | null | null | null | null | null | null |
3 | rs2938401 | 10,982,296 | G | A | 0.886 | 0.896 | 0.977 | -0.053401 | 0.0102 | 0 | 1 | +-+-+-+-+++++-+-+-++-+++-++- | 0 | 27 | 0.6541 | 53,660 | 2,044,417 | 193,374 | null | null | null | null | null | null |
17 | rs4792122 | 11,200,979 | T | C | 0.648 | 0.646 | 0.979 | 0.038403 | 0.0073 | 0 | 0 | +++------++-+-?-++-+-++-++-+ | 34.9 | 26 | 0.03978 | 48,531 | 1,621,557 | 173,104 | null | null | null | null | null | null |
2 | rs67076583 | 148,082,918 | G | A | 0.816 | 0.813 | 0.969 | 0.045404 | 0.0087 | 0 | 0 | --?-+-?------+-+-+?-----+-+- | 0 | 24 | 0.7067 | 52,395 | 2,005,544 | 188,911 | null | null | null | null | null | null |
5 | rs2455404 | 60,939,019 | G | A | 0.494 | 0.496 | 0.978 | -0.037204 | 0.0071 | 0 | 0 | +-?+?+-++++++-?++??-?+++???? | 0 | 17 | 0.7613 | 46,744 | 1,575,530 | 166,894 | null | null | null | null | null | null |
7 | rs6971558 | 100,079,857 | T | A | 0.691 | 0.699 | 0.978 | -0.039895 | 0.0077 | 0 | 0 | ++?+?++++-+++-?+-??+?+++-?+? | 0 | 19 | 0.6835 | 46,958 | 1,577,691 | 167,620 | null | null | null | null | null | null |
21 | rs2836950 | 40,604,429 | G | C | 0.361 | 0.361 | 0.991 | -0.038803 | 0.0075 | 0 | 1 | ++-++????+-++??+-??---+-?--- | 0 | 18 | 0.6436 | 45,224 | 1,223,287 | 162,389 | null | null | null | null | null | null |
6 | rs10948130 | 44,285,578 | G | A | 0.114 | 0.118 | 0.98 | 0.053598 | 0.0104 | 0 | 0 | -+?-?-+--+----+--??+?+++++-- | 0 | 22 | 0.4705 | 52,192 | 2,004,123 | 188,298 | null | null | null | null | null | null |
1 | rs6593604 | 96,956,769 | G | A | 0.466 | 0.473 | 0.99 | -0.033898 | 0.0066 | 0 | 0 | +++--++++-+++-++++++++++++-+ | 12.5 | 27 | 0.2774 | 53,660 | 2,044,417 | 193,374 | null | null | null | null | null | null |
1 | rs259324 | 95,746,460 | T | C | 0.608 | 0.61 | 0.988 | 0.037199 | 0.0072 | 0 | 0 | ++?--+-++---+??+++-+-+++-+++ | 9.3 | 24 | 0.3303 | 47,413 | 1,580,751 | 168,754 | null | null | null | null | null | null |
20 | rs6068172 | 51,040,244 | T | C | 0.74 | 0.736 | 0.994 | 0.041804 | 0.0081 | 0 | 0 | +++-++???-++++?++-+--+++-?-- | 0 | 22 | 0.5183 | 46,453 | 1,225,518 | 165,214 | null | null | null | null | null | null |
3 | rs34666610 | 28,774,608 | C | A | 0.738 | 0.726 | 0.972 | 0.041804 | 0.0081 | 0 | 0 | --?--++-+-++-+?-++?-+++-+-++ | 25.4 | 24 | 0.1228 | 47,461 | 1,582,888 | 169,040 | null | null | null | null | null | null |
7 | rs74919346 | 39,277,686 | G | A | 0.967 | 0.964 | 0.936 | 0.100804 | 0.0196 | 0 | 0 | ----?+-?+--+-----?--?-+--??? | 16.1 | 20 | 0.2497 | 52,311 | 1,841,506 | 188,595 | null | null | null | null | null | null |
2 | rs72790519 | 22,802,001 | G | A | 0.954 | 0.957 | 0.884 | -0.085101 | 0.0167 | 0 | 0 | +-?-?+?++++++-+++??-?+-+???? | 0 | 17 | 0.8894 | 51,678 | 1,998,186 | 186,766 | null | null | null | null | null | null |
9 | rs3104554 | 128,152,615 | T | C | 0.409 | 0.418 | 0.993 | 0.034199 | 0.0067 | 0 | 0 | ++?-+--++++++-+++?--++-+--+- | 9.1 | 25 | 0.3313 | 52,591 | 2,005,749 | 189,312 | null | null | null | null | null | null |
2 | rs11123998 | 105,190,837 | G | A | 0.461 | 0.467 | 0.981 | -0.0357 | 0.007 | 0 | 7 | +++-?++-+++++-?+++++-+-+-?-- | 0 | 24 | 0.5161 | 48,348 | 1,618,553 | 172,424 | null | null | null | null | null | null |
8 | rs6996150 | 137,026,071 | T | C | 0.463 | 0.457 | 0.984 | 0.033299 | 0.0066 | 0 | 0 | +--++--+++--++++++++?+-++-+- | 0 | 26 | 0.8952 | 53,448 | 2,044,205 | 192,950 | null | null | null | null | null | null |
5 | rs3828616 | 71,496,419 | G | A | 0.311 | 0.31 | 0.998 | 0.037903 | 0.0075 | 0 | 10 | ----?++------+?--??-?-++-?-+ | 41.3 | 21 | 0.02306 | 48,025 | 1,618,230 | 171,778 | null | null | null | null | null | null |
4 | rs2724294 | 134,576,972 | T | G | 0.378 | 0.378 | 0.997 | -0.036301 | 0.0072 | 0 | 7 | ----+++--++---?+-?-+?+---+-- | 28.3 | 24 | 0.09429 | 48,264 | 1,621,290 | 172,570 | null | null | null | null | null | null |
1 | rs7544790 | 115,023,982 | G | A | 0.329 | 0.326 | 0.995 | 0.038201 | 0.0075 | 0 | 0 | --??++-?-+----?--??+?-?++?-- | 0 | 18 | 0.4837 | 45,689 | 1,383,322 | 163,506 | null | null | null | null | null | null |
9 | rs1500323 | 8,370,763 | G | A | 0.74 | 0.742 | 0.988 | -0.037598 | 0.0075 | 0 | 11 | ++?--++++--+++++++-+-+-+---+ | 0 | 26 | 0.9398 | 52,646 | 2,005,804 | 189,422 | null | null | null | null | null | null |
19 | rs2074966 | 4,670,506 | T | C | 0.904 | 0.905 | 0.989 | 0.058297 | 0.0116 | 0 | 0 | ++?++++?+++++-+++?++?+++++-+ | 0 | 23 | 0.8264 | 51,607 | 1,809,458 | 185,812 | null | null | null | null | null | null |
3 | rs7624230 | 85,793,376 | G | C | 0.891 | 0.884 | 0.957 | 0.058099 | 0.0115 | 0 | 1 | -+-------+----?+-??-?-++-?+- | 5.1 | 22 | 0.3917 | 48,156 | 1,619,588 | 172,256 | null | null | null | null | null | null |
2 | rs78351802 | 125,016,785 | T | C | 0.775 | 0.776 | 0.983 | -0.039198 | 0.0078 | 0.000001 | 0 | ---+--+----+---+-+------+-+- | 0 | 27 | 0.8361 | 53,660 | 2,044,417 | 193,374 | null | null | null | null | null | null |
1 | rs6662980 | 35,360,078 | G | A | 0.34 | 0.334 | 0.994 | -0.035399 | 0.0071 | 0.000001 | 5 | ++??++?+++-+-++-+??+?+?+?++- | 0 | 19 | 0.6182 | 51,307 | 2,003,177 | 186,212 | null | null | null | null | null | null |
15 | rs4887122 | 74,035,248 | T | C | 0.0212 | 0.0223 | 0.992 | -0.125405 | 0.025 | 0.000001 | 0 | -?+-?-?---+--??--+++--+--??? | 0 | 19 | 0.6419 | 47,165 | 1,607,227 | 168,485 | null | null | null | null | null | null |
2 | rs777344 | 166,533,565 | G | A | 0.759 | 0.759 | 0.992 | -0.040801 | 0.0081 | 0.000001 | 0 | ++?+++-++++++-?++----+++++-+ | 2 | 25 | 0.4338 | 47,517 | 1,582,944 | 169,152 | null | null | null | null | null | null |
22 | rs4253755 | 46,615,376 | G | A | 0.874 | 0.876 | 0.99 | 0.050503 | 0.0101 | 0.000001 | 3 | -+?--+--++-+-+--+??-?-+-??-- | 23.1 | 21 | 0.1613 | 52,131 | 2,003,309 | 188,132 | null | null | null | null | null | null |
12 | rs61923308 | 60,828,737 | G | A | 0.828 | 0.82 | 0.988 | 0.043596 | 0.0087 | 0.000001 | 0 | -++-+-+---+--+------+-+-++++ | 0 | 27 | 0.533 | 53,660 | 2,044,417 | 193,374 | null | null | null | null | null | null |
4 | rs6842042 | 149,608,267 | T | G | 0.203 | 0.205 | 0.977 | -0.041802 | 0.0084 | 0.000001 | 0 | -++----??-+--------++-----+- | 40.8 | 25 | 0.01701 | 51,829 | 1,650,228 | 186,085 | null | null | null | null | null | null |
8 | 8:83929540_T_G | 83,929,540 | T | G | 0.424 | 0.407 | 0.997 | 0.035898 | 0.0072 | 0.000001 | 4 | ++??++-?+++++??-+??+?-?-+??? | 13 | 15 | 0.3041 | 45,458 | 1,377,568 | 162,619 | null | null | null | null | null | null |
5 | rs79186605 | 140,617,260 | T | G | 0.046 | 0.0447 | 0.844 | -0.089804 | 0.018 | 0.000001 | 0 | -+?-?+?-?-++-?-++??-?--++??? | 1 | 16 | 0.4414 | 50,655 | 1,798,409 | 182,597 | null | null | null | null | null | null |
3 | rs60541362 | 85,610,855 | G | A | 0.649 | 0.656 | 0.99 | 0.034199 | 0.0069 | 0.000001 | 0 | -+--------------++--+-----+- | 0 | 27 | 0.7425 | 53,660 | 2,044,417 | 193,374 | null | null | null | null | null | null |
18 | rs2612578 | 42,969,477 | T | C | 0.353 | 0.345 | 0.991 | 0.036496 | 0.0073 | 0.000001 | 3 | ++?+-++++++-++?+-??+?+++-?+- | 6 | 21 | 0.3798 | 47,142 | 1,580,975 | 168,304 | null | null | null | null | null | null |
19 | rs151219689 | 57,080,152 | G | A | 0.0108 | 0.0102 | 0.882 | 0.183704 | 0.0371 | 0.000001 | 0 | -???????????-??-?????-?????? | 0 | 3 | 0.4122 | 36,671 | 972,824 | 138,376 | null | null | null | null | null | null |
10 | rs2629558 | 126,545,779 | G | C | 0.374 | 0.372 | 0.959 | -0.037401 | 0.0076 | 0.000001 | 0 | ++?++?+-??-+++?++-?-+++++??? | 10.8 | 18 | 0.323 | 45,013 | 1,312,332 | 161,038 | null | null | null | null | null | null |
11 | rs10791603 | 102,835,575 | G | A | 0.393 | 0.386 | 0.99 | 0.033096 | 0.0067 | 0.000001 | 0 | -+--+----+---+-+--?-?---++-- | 0 | 25 | 0.8048 | 53,392 | 2,044,149 | 192,838 | null | null | null | null | null | null |
4 | rs4835529 | 149,555,789 | T | G | 0.681 | 0.695 | 0.995 | -0.036996 | 0.0075 | 0.000001 | 3 | -+?--+-++----+?--+?---+--?+- | 0 | 23 | 0.5222 | 47,409 | 1,581,242 | 168,838 | null | null | null | null | null | null |
18 | rs79835092 | 42,699,275 | G | A | 0.912 | 0.912 | 0.961 | 0.058099 | 0.0118 | 0.000001 | 0 | ---++--------+---??+?----+-- | 0 | 24 | 0.9956 | 53,337 | 2,044,094 | 192,728 | null | null | null | null | null | null |
16 | rs77718158 | 9,134,536 | G | A | 0.111 | 0.113 | 0.967 | -0.053496 | 0.0109 | 0.000001 | 0 | ++++++-??++++++++??+?+-+++-+ | 0 | 22 | 0.9751 | 51,506 | 1,649,905 | 185,439 | null | null | null | null | null | null |
5 | rs78884689 | 59,236,972 | G | A | 0.916 | 0.925 | 0.973 | -0.058095 | 0.0118 | 0.000001 | 6 | ++++-+--+++++++-+??++-+-+-++ | 0 | 25 | 0.8158 | 53,549 | 2,044,306 | 193,152 | null | null | null | null | null | null |
2 | rs66537969 | 7,252,624 | T | C | 0.841 | 0.836 | 0.988 | -0.047102 | 0.0096 | 0.000001 | 0 | --?-+-----+---?---+--++----- | 0 | 25 | 0.6779 | 47,517 | 1,582,944 | 169,152 | null | null | null | null | null | null |
11 | rs3019705 | 96,488,463 | G | A | 0.764 | 0.764 | 0.996 | -0.039999 | 0.0081 | 0.000001 | 0 | ++-++--?++-+++?+--++-+++++-- | 7.9 | 25 | 0.3485 | 47,759 | 1,425,478 | 170,028 | null | null | null | null | null | null |
22 | rs6001862 | 40,681,788 | T | C | 0.345 | 0.348 | 0.989 | 0.033802 | 0.0069 | 0.000001 | 0 | +++-+++++++++-++-?--++-++++- | 11.6 | 26 | 0.2934 | 53,605 | 2,044,362 | 193,264 | null | null | null | null | null | null |
2 | rs74596065 | 56,843,547 | G | A | 0.234 | 0.243 | 0.955 | 0.0395 | 0.008 | 0.000001 | 0 | --?+-+?------+-+--?+--+-+--+ | 0 | 24 | 0.749 | 52,395 | 2,005,544 | 188,911 | null | null | null | null | null | null |
5 | rs4835675 | 137,623,683 | T | C | 0.67 | 0.68 | 0.992 | -0.034105 | 0.007 | 0.000001 | 0 | ---++----------++??-?+-+--+- | 31.5 | 24 | 0.0678 | 53,337 | 2,044,094 | 192,728 | null | null | null | null | null | null |
9 | rs4977405 | 20,260,550 | G | C | 0.254 | 0.263 | 0.997 | -0.039001 | 0.008 | 0.000001 | 0 | ++++--+-++++-+?+++-+++++--+- | 0 | 26 | 0.6384 | 48,531 | 1,621,557 | 173,104 | null | null | null | null | null | null |
16 | rs112116499 | 82,878,390 | G | A | 0.682 | 0.678 | 0.978 | 0.035097 | 0.0072 | 0.000001 | 0 | ---+--+-?--+-+-+-??+?-+-++-+ | 18.7 | 23 | 0.2047 | 52,278 | 1,845,984 | 188,515 | null | null | null | null | null | null |
20 | rs6022379 | 51,917,336 | G | A | 0.629 | 0.625 | 0.981 | 0.035695 | 0.0073 | 0.000001 | 0 | -?----?--+----?-+?------??+- | 0 | 21 | 0.7336 | 47,332 | 1,613,758 | 169,297 | null | null | null | null | null | null |
2 | rs7609308 | 156,992,042 | G | C | 0.859 | 0.857 | 0.992 | 0.0494 | 0.0101 | 0.000001 | 1 | -------?-+---+?--?---+------ | 19.7 | 24 | 0.1886 | 47,704 | 1,425,423 | 169,918 | null | null | null | null | null | null |
8 | rs7819317 | 5,048,203 | G | A | 0.644 | 0.64 | 0.952 | 0.037296 | 0.0076 | 0.000001 | 0 | --??---?--+--+?--??+?-?+-??+ | 29.8 | 17 | 0.1139 | 45,615 | 1,381,687 | 163,223 | null | null | null | null | null | null |
Obsessive-Compulsive Disorder GWAS Summary Statistics (PGC)
Mirror of Psychiatric Genomics Consortium (PGC) summary statistics for Obsessive-Compulsive Disorder (ocd2025), redistributed in a single Apache Parquet file for use with OpenMed Genomics.
Source
- Primary citation: International OCD Foundation Genetics Collaborative, 2025
- Original distributor: Psychiatric Genomics Consortium (https://pgc.unc.edu/for-researchers/download-results/)
This mirror exists only because the upstream OpenMed mirror became inaccessible. No modifications have been made to the underlying data; per-shard parquet files were concatenated into a single file for convenient streaming.
File
pgc-ocd-tourette_ocd2025.parquet -- one Apache Parquet file containing the full summary
statistics table in the PGC's published schema (SNP, CHR, BP, A1, A2,
FRQ, OR/BETA, SE, P, ...).
Usage
import polars as pl
df = pl.read_parquet(
"https://huggingface.co/datasets/turmex2/pgc-ocd-tourette/resolve/main/pgc-ocd-tourette_ocd2025.parquet"
)
License & terms of use
PGC summary statistics are released for non-commercial research use only. Do not attempt to re-identify individuals. Results derived from these data are not a clinical diagnosis. See the original publication for the full data-use agreement.
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