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Molecule name
stringlengths
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9
SMILES
stringlengths
22
138
Caco-2 Permeability Papp A>B
float64
0
51.4
E-0010647
CN(C)CCCNc1nc(Nc2ccncc2)nc2ccccc12
4.16
E-0011026
COc1ccc(Nc2nccc(NCCc3ccncc3)n2)cc1
26.39
E-0011335
Cc1ccc(CNc2cc(-c3ccccc3)[nH]c(=O)n2)cc1
20.21
E-0011365
COc1cccc(Nc2nc(-c3ccccc3)cs2)c1
2.02
E-0011366
COc1ccc(-c2csc(Nc3ccccn3)n2)cc1
12.29
E-0011648
c1cc2ccc(-c3ccc(OCCN4CCCCC4)cc3)cc2cn1
14.28
E-0011694
Fc1cc(-c2ccnc(Nc3cccc(CN4CCOCC4)c3)n2)cc(N2CCOCC2)c1
14.8
E-0011791
CS(=O)(=O)Nc1cccc(-c2ccnc(Nc3ccc(CC(N)=O)cc3)n2)c1
1.65
E-0011872
O=C(c1n[nH]c2ccccc12)N1CCC(Nc2ccc(Cl)cc2)CC1
25.96
E-0011874
O=C(c1n[nH]c2ccccc12)N1CCN(Cc2ccc(C(F)(F)F)cc2)CC1
24.23
E-0011880
Fc1cccc(-c2ccnc(Nc3ccc(CN4CCOCC4)cc3)n2)c1
20.19
E-0011881
c1cc2ccc(-n3cc(OCCN4CCCCC4)cn3)cc2cn1
29.83
E-0011882
c1cc2ccc(-n3cc(OCCN4CCCCC4)cn3)cc2nn1
34.24
E-0011883
CNc1cc2ccncc2cc1-n1cc(OCCN2CCCCC2)cn1
13.84
E-0011884
Cc1c2ccncc2cc2c3cc(OCCNC4CCOCC4)ccc3n(C)c12
0.82
E-0011885
Cc1c2ccncc2cc2c3cc(OC[C@H](C)NC4CCOCC4)ccc3n(C)c12
0.51
E-0011888
Nc1cc(-c2ccccc2)nc2nc(-c3ccccc3)cn12
21.16
E-0011889
COC(=O)c1nn(-c2ccccc2)cc1N
2.3
E-0011890
COC(=O)c1nn(C(C)C)cc1N
31.75
E-0011891
O=C(c1nn(CCO)c2ccccc12)N1CCC(Oc2ccc(Cl)cc2)CC1
31.5
E-0011892
CN(C)CCn1nc(C(=O)N2CCC(Oc3ccc(Cl)cc3)CC2)c2ccccc21
18.27
E-0011893
CN1CCN(c2cccc(Nc3nc(-c4ccc(F)cc4)cs3)c2)CC1
2.64
E-0011894
CN(C)CCCOc1ccccc1Nc1nc(-c2ccc(F)cc2)cs1
2.56
E-0011895
O=C(c1n[nH]c2ccccc12)N1CCC(Oc2ccccc2Cl)CC1
18.23
E-0011896
O=C(c1n[nH]c2ccccc12)N1CCC(Oc2cccc(Cl)c2)CC1
9.8
E-0011897
O=C(c1n[nH]c2ccccc12)N1CCC(Oc2ccc(C(F)(F)F)cc2)CC1
6.91
E-0011898
O=C(c1n[nH]c2ccccc12)N1CC(NCc2ccc(Cl)cc2)C1
37.81
E-0011899
O=C(c1n[nH]c2ccccc12)N1CCN(Cc2ccccc2Cl)CC1
32.64
E-0011900
O=C(c1n[nH]c2ccccc12)N1CCN(Cc2cccc(Cl)c2)CC1
32.5
E-0011901
O=C(c1n[nH]c2ccccc12)N1CCN(Cc2ccc(F)cc2)CC1
42.69
E-0011908
Cc1ccc2[nH]nc(C(=O)N3CCC(Oc4ccc(Cl)cc4)CC3)c2c1
4.4
E-0011911
O=C(c1n[nH]c2cc(F)ccc12)N1CCC(Oc2ccc(Cl)cc2)CC1
4.43
E-0011913
COc1ccc2c(C(=O)N3CCC(Oc4ccc(Cl)cc4)CC3)n[nH]c2c1
8.9
E-0011920
O=C(c1n[nH]c2ncccc12)N1CCC(Oc2ccc(Cl)cc2)CC1
27.91
E-0011924
Cc1cc(-c2ccccn2)cc2c3cc(OCCCN4CCCC4)ccc3n(C)c12
1.25
E-0011925
Cc1cc(-c2ncccn2)cc2c3cc(OCCCN4CCCC4)ccc3n(C)c12
3.42
E-0011927
Cc1cc(-c2ccncn2)cc2c3cc(OCCCN4CCCC4)ccc3n(C)c12
3.75
E-0011928
c1cncc(-c2ccnc(Nc3ccc(CN4CCOCC4)cc3)n2)c1
38.51
E-0011929
NC(=O)Cc1ccc(Nc2nccc(-c3cccc(C(N)=O)c3)n2)cc1
0.66
E-0011930
c1cc(-c2ccnc(Nc3ccc(CN4CCOCC4)cc3)n2)cc(N2CCOCC2)c1
25.12
E-0011931
CC(C)N1CCN(c2ncn(-c3ccc(Nc4ncccn4)cc3)n2)CC1
36.13
E-0011932
CC(=O)Nc1cccc(-c2ccnc(Nc3ccc(CC(N)=O)cc3)n2)c1
1.68
E-0011937
CN(C)CCOc1ccc(-c2cc3nc(-c4ccccc4)cc(N)n3n2)cc1
8
E-0011938
Cn1cc(C(=O)N2CCN(c3ccc(CN4CCC4)cc3)CC2)c2cccnc21
11.97
E-0011939
Cn1cc(C(=O)N2CCN(c3ccc(CN4CC(F)C4)cc3)CC2)c2cccnc21
20.41
E-0011940
Cn1cc(C(=O)N2CCN(c3ccc(CN4CC(C(F)(F)F)C4)cc3)CC2)c2cccnc21
30.59
E-0011941
Cc1c(N)c(-n2cc(OCCN3CCCCC3)cn2)cc2cnccc12
13.56
E-0011942
CS(=O)(=O)Nc1cccc(-c2ccnc(Nc3ccc(CN4CCOCC4)cc3)n2)c1
17.04
E-0011943
CC(=O)Nc1cccc(-c2ccnc(Nc3ccc(CN4CCOCC4)cc3)n2)c1
21.23
E-0011944
Fc1cc(-c2ccnc(Nc3ccc(CN4CCOCC4)cc3)n2)cc(N2CCOCC2)c1
9.31
E-0011945
NC(=O)Cc1ccc(Nc2nccc(-c3cc(F)cc(N4CCOCC4)c3)n2)cc1
17.35
E-0011946
CN1CCN(c2cc(F)cc(-c3ccnc(Nc4ccc(CC(N)=O)cc4)n3)c2)CC1
11.77
E-0011947
CC(C)N1CCN(c2ncn(-c3ccc(Nc4ncc(-c5ccccc5)cn4)cc3)n2)CC1
2.55
E-0011948
CC(C)N1CCN(c2ncn(-c3ccc(Nc4ncc(-c5cccc(F)c5)cn4)cc3)n2)CC1
1.53
E-0011949
Cn1nc(C(=O)N2CCN(Cc3ccc(Cl)cc3)CC2)c2ccccc21
39.47
E-0011950
CN(c1ccc(Cl)cc1)C1CCN(C(=O)c2n[nH]c3ccccc23)CC1
10.84
E-0011951
O=C(c1n[nH]c2ccccc12)N1CCN(Cc2ccc(Cl)c(F)c2)CC1
31.04
E-0011952
O=C(c1n[nH]c2ccccc12)N1CCN(Cc2ccc(Cl)cc2F)CC1
33.07
E-0011953
CCCn1nc(C(=O)N2CCN(Cc3ccc(Cl)cc3)CC2)c2ccccc21
6.27
E-0011954
CC(C)n1nc(C(=O)N2CCN(Cc3ccc(Cl)cc3)CC2)c2ccccc21
9.54
E-0011955
O=C(c1noc2ccccc12)N1CCN(Cc2ccc(Cl)cc2)CC1
24.03
E-0011956
O=C(c1nsc2ccccc12)N1CCN(Cc2ccc(Cl)cc2)CC1
26.53
E-0011971
COc1ccc2[nH]c3c(=O)n(CC4CCC(=O)NC4)cnc3c2c1
2.4
E-0011983
COc1ccc2[nH]c3c(=O)n(CC4CC5(CNC5)C4)cnc3c2c1
2.01
E-0011988
COc1ccc2[nH]c3c(=O)n(C[C@@H]4CCCN(C)C4)cnc3c2c1
29.94
E-0011989
COc1ccc2[nH]c3c(=O)n(C[C@H]4CCCN(C)C4)cnc3c2c1
26.49
E-0011991
COc1ccc2[nH]c3c(=O)n(CCCN4CCCC4)cnc3c2c1
31.07
E-0012036
COc1ccc2[nH]c3c(=O)n(CCCN4CCC(OC)CC4)cnc3c2c1
32.95
E-0012037
COc1cc2[nH]c3c(=O)n(CCCN4CCCCC4)cnc3c2cc1OC
14.72
E-0012055
COc1ccc2[nH]c3c(=O)n(CCCN(C)C4CCCCC4)cnc3c2c1
32.85
E-0012083
Cn1cc(C(=O)N2CCN(c3ccc(CN4CC(O)C4)cc3)CC2)c2cccnc21
5.58
E-0012085
COc1cc(N)ncc1CCCN(C)CCCn1cnc2c([nH]c3ccccc32)c1=O
1.5
E-0012099
COC1CN(Cc2ccc(N3CCN(C(=O)c4cn(C)c5ccccc45)CC3)cn2)C1
29.04
E-0012105
COc1ccc2[nH]c3c(=O)n(CCCN(C)CCCc4cnc(N)cc4OC)cnc3c2c1
1.12
E-0012110
COC1CN(Cc2ccc(N3CCN(C(=O)c4cc(-c5ccccc5)on4)CC3)cc2)C1
31.83
E-0012116
COC1CN(Cc2ccc(N3CCN(C(=O)c4cn(C)c5ccccc45)CC3)cc2)C1
27.54
E-0012118
COC1CN(Cc2ccc(N3CCN(C(=O)c4cc5ccccc5n4C)CC3)cc2)C1
27.79
E-0012129
COC1CN(Cc2ccc(N3CCN(C(=O)c4cc(-c5ccccc5)n(C)n4)CC3)cc2)C1
35.89
E-0012133
COC1CN(Cc2ccc(N3CCN(C(=O)c4c(C)n(C)c5ccccc45)CC3)cc2)C1
27.36
E-0012135
COc1cccc2c(C(=O)N3CCN(c4ccc(CN5CC(OC)C5)cc4)CC3)cn(C)c12
24.01
E-0012136
COc1ccc2c(c1)c(C(=O)N1CCN(c3ccc(CN4CC(OC)C4)cc3)CC1)cn2C
28.23
E-0012140
COC1CN(Cc2ccc(N3CCN(C(=O)c4c5ccccc5n5ccccc45)CC3)cc2)C1
19.78
E-0012145
COc1ccc2[nH]c3c(=O)n(CCCN4CCCCC4)cnc3c2c1
34.83
E-0012150
Cn1cc(C(=O)N2CCN(c3ccc(CN4CC(C)(O)C4)cc3)CC2)c2cccnc21
4.71
E-0012151
COC1(C)CN(Cc2ccc(N3CCN(C(=O)c4cn(C)c5ncccc45)CC3)cc2)C1
22.44
E-0012152
Cn1cc(C(=O)N2CCN(c3ccc(CN4CC(CO)C4)cc3)CC2)c2cccnc21
1.05
E-0012153
COCC1CN(Cc2ccc(N3CCN(C(=O)c4cn(C)c5ncccc45)CC3)cc2)C1
14.39
E-0012154
Cn1cc(C(=O)N2CCN(c3ccc(CN4CC5(CCCCO5)C4)cc3)CC2)c2cccnc21
24.97
E-0012155
CN(C)C(=O)Cc1ccc(Nc2nccc(-c3cccc(NS(C)(=O)=O)c3)n2)cc1
12.48
E-0012156
CC(C)N1CCN(c2ncn(-c3ccc(Nc4ncc(-c5cccnc5)cn4)cc3)n2)CC1
27.82
E-0012157
CS(=O)(=O)Nc1cccc(-c2ccnc(Nc3cccc(CN4CCOCC4)c3)n2)c1
29.44
E-0012158
CS(=O)(=O)Nc1cccc(-c2ccnc(Nc3cccc(CC(N)=O)c3)n2)c1
29.3
E-0012159
CN1CCN(Cc2ccc(Nc3nccc(-c4cccc(F)c4)n3)cc2)CC1
22.87
E-0012160
Fc1cccc(-c2ccnc(Nc3ccc(CN4CCCCC4)cc3)n2)c1
20.29
E-0012161
CN1CCC(Oc2ccc(Nc3nccc(-c4cccc(F)c4)n3)cc2)CC1
9.52
E-0012162
c1cc2ccc(-c3ccc(OCCN4CCCCC4)cn3)cc2cn1
22.53
E-0012163
O=C(c1n[nH]c2ccccc12)N1CCN(Cc2ccc(Cl)nc2)CC1
27.38
E-0012164
O=C(NC1CN(Cc2ccc(Cl)cc2)C1)c1n[nH]c2ccccc12
18.99
E-0012165
Cc1ccc(CNc2nc(-c3ccccc3)cc(=O)[nH]2)cc1
6.98
E-0012166
Cc1cccc(CNc2nc(-c3ccccc3)cc(=O)[nH]2)c1
10.57
End of preview. Expand in Data Studio

ExpansionRx-OpenADMET Caco-2 Permeability Papp A>B

Caco-2 Permeability Papp A>B dataset from the ExpansionRx-OpenADMET Blind Challenge [1] [2]. It is intended to be used through scikit-fingerprints library.

The task is to predict Caco-2 Permeability Papp A>B of molecules.

Characteristic Description
Tasks 1
Task type regression
Total samples 3773
Recommended split time
Recommended metric MAE

References

[1] OpenADMET team "Announcement 1: ExpansionRx-OpenADMET Blind Challenge" https://openadmet.ghost.io/expansionrx-openadmet-blind-challenge/

[2] HuggingFace Hub - ExpansionRx-OpenADMET challenge full dataset https://huggingface.co/datasets/openadmet/openadmet-expansionrx-challenge-data

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