| --- |
| license: cc-by-4.0 |
| pretty_name: TRIP50 Reaction-Energy Benchmark |
| size_categories: |
| - n<1K |
| task_categories: |
| - tabular-regression |
| tags: |
| - chemistry |
| - mlip |
| - benchmark |
| - dft |
| - coupled-cluster |
| - reaction-energy |
| - transition-state |
| - radical |
| - triplet |
| - ase |
| language: |
| - en |
| configs: |
| - config_name: species |
| data_files: data/species.parquet |
| - config_name: reactions |
| data_files: data/reactions.parquet |
| - config_name: aliases |
| data_files: data/aliases.parquet |
| --- |
| |
| # TRIP50 |
|
|
| TRIP50 is a 50-reaction benchmark for radical and triplet thermochemistry and forward/reverse barriers, with a DLPNO-CCSD(T) reference and 46 DFT method totals computed on the same geometries. The benchmark is small, well-curated, and chemically diverse — designed to evaluate methods on **relative** energetics: reaction energies (ΔE_rxn), forward barriers (ΔE‡_fwd), and reverse barriers (ΔE‡_rev). |
| |
| This release packages the structures and reference energies as a single Hugging Face dataset for use evaluating **machine-learning interatomic potentials (MLIPs)** alongside conventional DFT. |
| |
| > **No forces.** TRIP50 is a single-point energy benchmark on relaxed stationary points. MLIPs that require force training data should look elsewhere; MLIPs being evaluated on relative energetics work directly. |
| |
| ## Contents |
| |
| | File | Rows | Notes | |
| |---|---|---| |
| | `data/trip50.extxyz` | 156 frames | ASE-readable, all 47 method energies on the comment line | |
| | `data/species.parquet` | 156 | one row per canonical structure, full float64 precision | |
| | `data/reactions.parquet` | 50 | reaction definitions with reference Δs in **kcal/mol** | |
| | `data/aliases.parquet` / `aliases.csv` | 30 | logical alias map (no duplicate xyz files shipped) | |
| | `data/methods.json` | – | slug ↔ display-name mapping for the 47 method columns | |
| | `data/MANIFEST.sha256` | – | digest of every payload file | |
| |
| ## Schemas |
| |
| ### `species.parquet` |
| |
| | column | type | notes | |
| |---|---|---| |
| | `species_id` | string | canonical name, e.g. `1-R1`, `26-TS` | |
| | `rxn_id` | int32 | 1..50 | |
| | `role` | string | `R1` / `R2` / `TS` / `P1` / `P2` | |
| | `n_atoms` | int32 | | |
| | `atomic_numbers` | list<int8> | length `n_atoms` | |
| | `positions` | list<list<float64, 3>> | Cartesian, **Å** | |
| | `charge` | int8 | always `0` | |
| | `multiplicity` | string | `singlet` / `doublet` / `triplet` | |
| | `spin_multiplicity` | int8 | `1` / `2` / `3` | |
| | `energy_dlpno_ccsd_t` | float64 | reference, **Hartree** | |
| | `energy_<slug>` × 46 | float64 | DFT methods, Hartree (slugs in `methods.json`) | |
|
|
| ### `reactions.parquet` |
|
|
| | column | type | notes | |
| |---|---|---| |
| | `rxn_id` | int32 | 1..50 | |
| | `category` | string | one of `C-C`, `C-O`, `C-S`, `HAT`, `Si-X`, `C-Hal`, `N-X` (Figure 2 of the source paper) | |
| | `r1_species_id`, `r2_species_id`, `ts_species_id`, `p1_species_id`, `p2_species_id` | string (nullable) | post-alias canonical IDs; `null` = unimolecular leg (contributes 0 H) | |
| | `is_unimolecular_reactant`, `is_unimolecular_product` | bool | | |
| | `dE_rxn_kcal_dlpno` | float64 | E(P1)+E(P2) − E(R1)−E(R2), **kcal/mol** | |
| | `dE_fwd_kcal_dlpno` | float64 | E(TS) − E(R1)−E(R2), kcal/mol | |
| | `dE_rev_kcal_dlpno` | float64 | E(TS) − E(P1)−E(P2), kcal/mol | |
|
|
| ### `aliases.parquet` |
|
|
| | column | type | notes | |
| |---|---|---| |
| | `alias` | string | non-canonical species id seen in the rxn definitions | |
| | `canonical` | string | the species_id actually present in `species.parquet` | |
| |
| Aliases are **logical only** — the dataset ships one xyz per canonical structure. A consumer evaluating reaction `50` should look up `p1_species_id = "48-R1"` (which is the same molecule as `50-P1`). |
| |
| ## Conventions |
| |
| - **Units**. Total energies in `species.parquet` and `trip50.extxyz` are in **Hartree**. Reference reaction-level Δ values in `reactions.parquet` are in **kcal/mol** (1 Hartree = 627.5094740631 kcal/mol). |
| - **Charge & spin**. Every species is neutral. Multiplicities span singlet / doublet / triplet. Spin-unaware MLIPs will incur unavoidable error on the radical and triplet species — a known limitation of the dataset for such models. |
| - **Unimolecular legs**. Reactions with a single reactant or product have the corresponding `R2` / `P2` field set to `null` in `reactions.parquet`, and the missing partner contributes 0 H to ΔE sums. This convention is inherited from the source paper. |
| - **Alias resolution**. Always go through `reactions.parquet` (which already stores post-alias canonical IDs). Never assume `{rxn}-{role}.xyz` exists for every (rxn, role). |
| - **Precision**. The Parquet artefacts are full float64. The `trip50.extxyz` representation rounds positions to ASE's default 8-decimal format (≈ 5 × 10⁻⁹ Å — far below physical precision). Use `species.parquet` if exact byte-identity matters. |
| |
| ## Usage |
| |
| ### Hugging Face `datasets` |
| |
| ```python |
| from datasets import load_dataset |
|
|
| species = load_dataset("patonlab/trip50", "species", split="train") |
| reactions = load_dataset("patonlab/trip50", "reactions", split="train") |
|
|
| print(species[0]["species_id"], species[0]["energy_dlpno_ccsd_t"], "Hartree") |
| print(reactions[0]["dE_fwd_kcal_dlpno"], "kcal/mol") |
| ``` |
| |
| ### ASE |
| |
| ```python |
| from ase.io import read |
|
|
| frames = read("hf://datasets/patonlab/trip50/data/trip50.extxyz", index=":") |
| e_dlpno = frames[0].info["energy_dlpno_ccsd_t"] # Hartree |
| mult = frames[0].info["multiplicity"] # 'singlet' | 'doublet' | 'triplet' |
| ``` |
| |
| A reference MLIP evaluator that prints a per-method MAE table is in [`examples/evaluate_mlip.py`](examples/evaluate_mlip.py). |
| |
| ## Limitations |
| |
| - **No forces or gradients.** Relative reaction energetics only. |
| - **Single geometries.** No conformer ensembles; no thermochemical corrections (ΔH / ΔG); no solvent corrections. |
| - **Reference is DLPNO-CCSD(T)**, not experiment. Methods that systematically agree with the reference may still disagree with experiment. |
| - **Spin-aware models recommended.** Roughly half the species are open-shell. |
| |
| ## Citation |
| |
| Please cite the original TRIP50 publication when using this dataset. See `CITATION.cff` for a machine-readable record. |
| |
| ```bibtex |
| @article{trip50, |
| title = {Fundamental Study of Density Functional Theory Applied to Triplet State |
| Reactivity: Introduction of the {TRIP50} Data Set}, |
| author = {Hughes, William B. and Popescu, Mihai V. and Paton, Robert S.}, |
| journal = {Journal of Chemical Theory and Computation}, |
| volume = {22}, |
| pages = {3530--3542}, |
| year = {2026}, |
| doi = {10.1021/acs.jctc.6c00144} |
| } |
| ``` |
| |
| ## License |
|
|
| [Creative Commons Attribution 4.0 International (CC-BY-4.0)](LICENSE). |
|
|