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reframe-hpc/reframe
reframe-hpc__reframe-3433
b7d86b1d777bc3bed7a3d71d95130376ab5d2820
diff --git a/reframe/utility/sanity.py b/reframe/utility/sanity.py index a4f57a301..1228586ff 100644 --- a/reframe/utility/sanity.py +++ b/reframe/utility/sanity.py @@ -8,6 +8,7 @@ import contextlib import glob as pyglob import itertools +import math import os import re import sys @@ -576,8 +577,14 @@ def calc_bo...
diff --git a/unittests/test_sanity_functions.py b/unittests/test_sanity_functions.py index 7e6368938..0e9367027 100644 --- a/unittests/test_sanity_functions.py +++ b/unittests/test_sanity_functions.py @@ -473,6 +473,18 @@ def test_assert_reference(): r'\(l=-1\.2, u=-0\.9\)'): sn.e...
Performance threshold goes to -inf when it should be zero. In attempting to create a performance test where zero is the correct value, I created the following reference (since a value of zero results in no reference check being performed; see https://github.com/reframe-hpc/reframe/issues/2857): ``` self.refere...
@vkarak: Related to #2857.@vkarak: > This works for me in that values of zero pass, and 1 or greater values fail, but what is unexpected is that the lower bound gets set to -inf: Indeed this is a bug. These checks should check against `None`: https://github.com/reframe-hpc/reframe/blob/b7d86b1d777bc3bed7a3d71d9513037...
2025-03-18T08:54:38Z
2025-03-18T08:54:38Z
0.3.88
[]
[ "unittests/test_sanity_functions.py::test_assert_ge_with_deferrables", "unittests/test_sanity_functions.py::test_assert_in", "unittests/test_sanity_functions.py::test_count_uniq", "unittests/test_sanity_functions.py::test_assert_false_with_deferrables", "unittests/test_sanity_functions.py::test_assert_not_i...
pip install -e .; pip install pytest pytest-json-report;
pytest --json-report --json-report-file=report_pytest.json
python:3.11
{ "command_test_small": "pytest --json-report --json-report-file=report_pytest.json unittests/test_sanity_functions.py", "issue_number": 3430, "merge_commit": "20fed5da1569a4962bed12510a89f53083aea3ef", "merged_at": "", "pr_number": 3433, "score": { "complexity": -1, "task_correctness": -1, "tes...
3,000
600
pytest --json-report --json-report-file=report_pytest.json unittests/test_sanity_functions.py
tobymao/sqlglot
tobymao__sqlglot-4837
08eb7f2032957c2fe3119963f344538b90d8f631
diff --git a/sqlglot/parser.py b/sqlglot/parser.py index 24bf1492f7..f5ed3a8923 100644 --- a/sqlglot/parser.py +++ b/sqlglot/parser.py @@ -1291,6 +1291,10 @@ class Parser(metaclass=_Parser): "SIMPLE", ), "INITIALLY": ("DEFERRED", "IMMEDIATE"), + "USING": ( + "BTREE", + ...
diff --git a/tests/dialects/test_mysql.py b/tests/dialects/test_mysql.py index 06638f16c5..4a28176ccf 100644 --- a/tests/dialects/test_mysql.py +++ b/tests/dialects/test_mysql.py @@ -83,6 +83,12 @@ def test_ddl(self): self.validate_identity( "CREATE OR REPLACE VIEW my_view AS SELECT column1 AS `bo...
MySQL dialect fails to parse PRIMARY KEY USING BTREE syntax **Before you file an issue** - Make sure you specify the "read" dialect eg. `parse_one(sql, read="spark")` - Make sure you specify the "write" dialect eg. `ast.sql(dialect="duckdb")` - Check if the issue still exists on main yes, the issue still exists. I'v tr...
@Gohoy: ```python sql = "CREATE TABLE test_table ( id INT AUTO_INCREMENT, alarm_category VARCHAR ( 255 ), alarm_rule VARCHAR ( 255 ), PRIMARY KEY(id) USING BTREE )" sqlglot.parse_one(sql,read='mysql') # result # sqlglot.errors.ParseError: Expecting ). Line 1, Col: 130. # id INT AUTO_INCREMENT, alarm_category VARCHA...
2025-03-05T15:49:35Z
2025-03-05T15:49:35Z
0.3.88
[]
[ "tests/dialects/test_mysql.py::TestMySQL::test_show_like_or_where", "tests/dialects/test_mysql.py::TestMySQL::test_identity", "tests/dialects/test_mysql.py::TestMySQL::test_string_literals", "tests/dialects/test_mysql.py::TestMySQL::test_show_columns", "tests/dialects/test_mysql.py::TestMySQL::test_types", ...
pip install -e .; pip install pytest pytest-json-report;
pytest --json-report --json-report-file=report_pytest.json
python:3.11
{ "command_test_small": "pytest --json-report --json-report-file=report_pytest.json tests/dialects/test_mysql.py", "issue_number": 4833, "merge_commit": "adf2fef27dc341508c3b9c710da0f835277094a1", "merged_at": "", "pr_number": 4837, "score": { "complexity": -1, "task_correctness": -1, "test_comp...
3,000
600
pytest --json-report --json-report-file=report_pytest.json tests/dialects/test_mysql.py
matchms/matchms
matchms__matchms-809
0b1707bd866f56404e4056df678af12a4bc20141
diff --git a/matchms/importing/load_from_msp.py b/matchms/importing/load_from_msp.py index cf7726a4..47dbedcc 100644 --- a/matchms/importing/load_from_msp.py +++ b/matchms/importing/load_from_msp.py @@ -109,7 +109,7 @@ def _parse_line_with_peaks(rline: str) -> Tuple[List[float], List[float], str]: def get_peak_value...
diff --git a/tests/importing/test_load_from_msp.py b/tests/importing/test_load_from_msp.py index 891ac002..839b604c 100644 --- a/tests/importing/test_load_from_msp.py +++ b/tests/importing/test_load_from_msp.py @@ -2,7 +2,7 @@ import os import numpy as np import pytest from matchms import Spectrum -from matchms.impo...
matchms fails when reading spectra where abundance is in scientific notation Example spectrum - spotted in the MSDial EI RI library. Funny thing is our regex only handles lower case `e` notation while this uses upper case. Makes me think if we shouldn't just leave the parsing of stuff to python and try to just identi...
2025-06-13T09:27:11Z
2025-06-13T09:27:11Z
0.4.3
[]
[ "tests/importing/test_load_from_msp.py::test_load_from_msp_diverse_spectrum_collection", "tests/importing/test_load_from_msp.py::test_load_from_msp_spaces_massbank_1", "tests/importing/test_load_from_msp.py::test_parse_metadata[comments: SMILES=\"CC(O)C(O)=O\"-expected_output1]", "tests/importing/test_load_fr...
pip install -e .; pip install pytest pytest-json-report;
pytest --json-report --json-report-file=report_pytest.json
python:3.11
{ "command_test_small": "pytest --json-report --json-report-file=report_pytest.json tests/importing/test_load_from_msp.py", "issue_number": 802, "merge_commit": "f54285408f4f6e702545871c126161120106e076", "merged_at": "", "pr_number": 809, "score": { "complexity": -1, "task_correctness": -1, "te...
3,000
600
pytest --json-report --json-report-file=report_pytest.json tests/importing/test_load_from_msp.py
DataDog/guarddog
DataDog__guarddog-523
4d8b7972885ce111991af01610b24b326dcc1de8
diff --git a/guarddog/analyzer/metadata/bundled_binary.py b/guarddog/analyzer/metadata/bundled_binary.py index 5b6e875..81ed040 100644 --- a/guarddog/analyzer/metadata/bundled_binary.py +++ b/guarddog/analyzer/metadata/bundled_binary.py @@ -14,7 +14,12 @@ class BundledBinary(Detector): # magic bytes are the firs...
diff --git a/tests/analyzer/metadata/test_bundled_binary.py b/tests/analyzer/metadata/test_bundled_binary.py index 07f1845..7a01283 100644 --- a/tests/analyzer/metadata/test_bundled_binary.py +++ b/tests/analyzer/metadata/test_bundled_binary.py @@ -19,6 +19,8 @@ class TestBundleBinary: binary_sample_elf = ( ...
Add Mach-O magic bytes to the bundled binary detector The [bundled binary detector](https://github.com/DataDog/guarddog/blob/v2.1.0/guarddog/analyzer/metadata/bundled_binary.py#L17) currently detects **ELF** (Unix) and **exe** (Windows) files, but it does not account for the magic bytes for **Mach-O** (Mac) files. This...
@ocku: Let me know if I can work on this :)@sobregosodd: Hello @ocku , the case you point out seems valid as well Please, send the PR well look into it. Thanks again!@ocku: ^ Created. Sorry for the delay! I had some issues with GitHub.
2025-01-22T12:07:10Z
2025-01-22T12:07:10Z
0.4.3
[]
[ "tests/analyzer/metadata/test_bundled_binary.py::TestBundleBinary::test_plain[detector1]", "tests/analyzer/metadata/test_bundled_binary.py::TestBundleBinary::test_empty[detector1]", "tests/analyzer/metadata/test_bundled_binary.py::TestBundleBinary::test_macho64[detector0]", "tests/analyzer/metadata/test_bundl...
pip install -e .; pip install pytest pytest-json-report;
pytest --json-report --json-report-file=report_pytest.json
python:3.11
{ "command_test_small": "pytest --json-report --json-report-file=report_pytest.json tests/analyzer/metadata/test_bundled_binary.py", "issue_number": 498, "merge_commit": "4ddb8c8b437c070dc86f17824b7690b5cd4385fe", "merged_at": "", "pr_number": 523, "score": { "complexity": -1, "task_correctness": -1...
3,000
600
pytest --json-report --json-report-file=report_pytest.json tests/analyzer/metadata/test_bundled_binary.py
mitmproxy/pdoc
mitmproxy__pdoc-806
ea2b69a4162226b07f68cd25d92d4d92dbbafaf8
diff --git a/CHANGELOG.md b/CHANGELOG.md index 747d22f..3337d33 100644 --- a/CHANGELOG.md +++ b/CHANGELOG.md @@ -4,6 +4,8 @@ ## Unreleased: pdoc next +- Include included HTML headers in the ToC by default by enabling markdown2's `mixed=True` option of the `header-ids` extra + (#806, @mrossinek) ## 2025-04-21: ...
diff --git a/test/test_render_helpers.py b/test/test_render_helpers.py index c17740f..4279725 100644 --- a/test/test_render_helpers.py +++ b/test/test_render_helpers.py @@ -110,6 +110,22 @@ def test_markdown_toc(): assert to_html("#foo\n#bar").toc_html # type: ignore +def test_mixed_toc(): + """ + markd...
Include HTML headers in ToC #### Problem Description When a docstring includes HTML headers (`<h1>`, etc.) for example when I used an `.. include:: some_file.html` (or some markdown file which mixes markdown and HTML headers for some reason) directive, those headers are not included in the table of contents. #### Pro...
@mhils: Sure, please send a PR!@mrossinek: > Sure, please send a PR! Happy to do so! How should I approach this? 1. Should I simply enable mixed header-ids by default? E.g. through `"header-ids": {"mixed": True}` here: https://github.com/mitmproxy/pdoc/blob/ea2b69a4162226b07f68cd25d92d4d92dbbafaf8/pdoc/render_helpers....
2025-05-04T12:43:09Z
2025-05-04T12:43:09Z
0.4.3
[]
[ "test/test_render_helpers.py::test_markdown_autolink[See https://www.python.org.-<p>See <a href=\"https://www.python.org\">https://www.python.org</a>.</p>\\n]", "test/test_render_helpers.py::test_qualname_candidates[foo-candidates1]", "test/test_render_helpers.py::test_relative_link[foo.bar-foo.bar.baz-bar/baz....
pip install -e .; pip install pytest pytest-json-report;
pytest --json-report --json-report-file=report_pytest.json
python:3.11
{ "command_test_small": "pytest --json-report --json-report-file=report_pytest.json test/test_render_helpers.py", "issue_number": 805, "merge_commit": "2ab4df12693678439a9063f0e3909c26545241a9", "merged_at": "", "pr_number": 806, "score": { "complexity": -1, "task_correctness": -1, "test_complet...
3,000
600
pytest --json-report --json-report-file=report_pytest.json test/test_render_helpers.py
tobymao/sqlglot
tobymao__sqlglot-4618
cfa25bb59b4537427aebe93f92c7176e045e7b0c
diff --git a/sqlglot/parser.py b/sqlglot/parser.py index 7f310b3b58..ae3f6cde66 100644 --- a/sqlglot/parser.py +++ b/sqlglot/parser.py @@ -5902,7 +5902,7 @@ def _parse_foreign_key(self) -> exp.ForeignKey: ) def _parse_primary_key_part(self) -> t.Optional[exp.Expression]: - return self._parse_fiel...
diff --git a/tests/dialects/test_tsql.py b/tests/dialects/test_tsql.py index 738120a2ee..fe1aa9c5dd 100644 --- a/tests/dialects/test_tsql.py +++ b/tests/dialects/test_tsql.py @@ -436,6 +436,13 @@ def test_tsql(self): "'a' + 'b'", ) + self.validate_identity( + "CREATE TABLE db.t...
TSQL: PRIMARY KEY constraint fails to parse if sort option is given The following CREATE TABLE statement parses just fine: ``` import sqlglot test = """CREATE TABLE dbo.test ( id INT, name VARCHAR(50), CONSTRAINT pk_testTable PRIMARY KEY (id) ) ;""" parsed_script = sqlglo...
@cchambers-rdi: Added version to OP.
2025-01-15T15:34:32Z
2025-01-15T15:34:32Z
0.3.88
[]
[ "tests/dialects/test_tsql.py::TestTSQL::test_rollback", "tests/dialects/test_tsql.py::TestTSQL::test_declare", "tests/dialects/test_tsql.py::TestTSQL::test_datetrunc", "tests/dialects/test_tsql.py::TestTSQL::test_transaction", "tests/dialects/test_tsql.py::TestTSQL::test_eomonth", "tests/dialects/test_tsq...
pip install -e .; pip install pytest pytest-json-report;
pytest --json-report --json-report-file=report_pytest.json
python:3.11
{ "command_test_small": "pytest --json-report --json-report-file=report_pytest.json tests/dialects/test_tsql.py", "issue_number": 4610, "merge_commit": "14474ee689025cc67b1f9a07e51d2f414ec5ab49", "merged_at": "", "pr_number": 4618, "score": { "complexity": -1, "task_correctness": -1, "test_compl...
3,000
600
pytest --json-report --json-report-file=report_pytest.json tests/dialects/test_tsql.py
MolSSI/QCElemental
MolSSI__QCElemental-350
cddc5313ad7a251501b633f119c2cb566885bcc1
diff --git a/.github/workflows/CI.yaml b/.github/workflows/CI.yaml index aa949f3..8aca4c9 100644 --- a/.github/workflows/CI.yaml +++ b/.github/workflows/CI.yaml @@ -17,7 +17,8 @@ jobs: matrix: python-version: ["3.7", "3.9", "3.11", "3.12"] pydantic-version: ["1", "2"] - runs-on: [ubuntu-...
diff --git a/qcelemental/tests/test_molecule.py b/qcelemental/tests/test_molecule.py index 46d7ced..b2154c0 100644 --- a/qcelemental/tests/test_molecule.py +++ b/qcelemental/tests/test_molecule.py @@ -2,6 +2,7 @@ Tests the imports and exports of the Molecule object. """ + import numpy as np import pytest @@ -79...
Floating point number allowed for molecular charge but not molecular multiplicity **Describe the bug** <!-- A clear and concise description of what the bug is. --> QCElemental allows floating point numbers for molecular charges, however when computing the spin with the fractional electron there is no way to represent...
@loriab: I'll make sure to bring this up to @bennybp to see if the database is ready for a type change.
2025-01-13T16:47:19Z
2025-01-13T16:47:19Z
0.4.3
[ "qcelemental/tests/test_molparse_validate_and_fill_chgmult.py::test_validate_and_fill_chgmult_mol_model[inp50-expected50-]", "qcelemental/tests/test_molecule.py::test_show", "qcelemental/tests/test_molecule.py::test_molecule_serialization[msgpack]", "qcelemental/tests/test_molecule.py::test_to_from_file_charg...
[ "qcelemental/tests/test_molparse_validate_and_fill_chgmult.py::test_validate_and_fill_chgmult_mol_model[inp3-expected3-bfdcbd63]", "qcelemental/tests/test_molecule.py::test_fragment_charge_configurations[0-4-0-2-0.0-5]", "qcelemental/tests/test_molecule.py::test_pretty_print", "qcelemental/tests/test_molparse...
pip install -e .; pip install pytest pytest-json-report;
pytest --json-report --json-report-file=report_pytest.json
python:3.11
{ "command_test_small": "pytest --json-report --json-report-file=report_pytest.json qcelemental/tests/test_molparse_validate_and_fill_chgmult.py qcelemental/tests/test_molecule.py", "issue_number": 317, "merge_commit": "1908ccc4228544f7c5dd02be7b660f2fc4e73ade", "merged_at": "", "pr_number": 350, "score": {...
3,000
600
pytest --json-report --json-report-file=report_pytest.json qcelemental/tests/test_molparse_validate_and_fill_chgmult.py qcelemental/tests/test_molecule.py
PyCQA/pyflakes
PyCQA__pyflakes-831
433dfd001746a69d12597f7c97af78c13e1f662e
diff --git a/pyflakes/checker.py b/pyflakes/checker.py index c7d3e882..9888d7ac 100644 --- a/pyflakes/checker.py +++ b/pyflakes/checker.py @@ -1008,8 +1008,12 @@ def addBinding(self, node, value): for scope in reversed(self.scopeStack) if not isinstance(scope, GeneratorScope) ...
diff --git a/pyflakes/test/test_other.py b/pyflakes/test/test_other.py index 68c38e95..23990820 100644 --- a/pyflakes/test/test_other.py +++ b/pyflakes/test/test_other.py @@ -1744,6 +1744,13 @@ def test_assign_expr(self): print(x) ''') + def test_assign_expr_after_annotation(self): + self....
Walrus operator + annotation can cause F821 in version 3.3.0 In order to type hint a variable used in a walrus expression, I put the type hint outside of the expression like in the following example (test.py): ``` a: int if a := 3: print(a) print(a) ``` Variable "a" is defined in both places ``` $ python3 test....
@sigmavirus24: Thanks for reporting and fixing!
2025-03-30T21:54:34Z
2025-03-30T21:54:34Z
0.3.88
[ "pyflakes/test/test_other.py::TestUnusedAssignment::test_unusedReassignedVariable", "pyflakes/test/test_other.py::Test::test_doubleAssignment" ]
[ "pyflakes/test/test_other.py::TestStringFormatting::test_invalid_percent_format_calls", "pyflakes/test/test_other.py::TestUnusedAssignment::test_unusedVariable", "pyflakes/test/test_other.py::TestUnusedAssignment::test_exceptionUnusedInExceptInFunction", "pyflakes/test/test_other.py::TestAsyncStatements::test...
pip install -e .; pip install pytest pytest-json-report;
pytest --json-report --json-report-file=report_pytest.json
python:3.11
{ "command_test_small": "pytest --json-report --json-report-file=report_pytest.json pyflakes/test/test_other.py", "issue_number": 830, "merge_commit": "87051d20e2f5054302f1a5785c6b5a2c83a39cba", "merged_at": "", "pr_number": 831, "score": { "complexity": -1, "task_correctness": -1, "test_complet...
3,000
600
pytest --json-report --json-report-file=report_pytest.json pyflakes/test/test_other.py
tobymao/sqlglot
tobymao__sqlglot-5015
06db2350a1c625cc30212912a73267127fc4f3ea
diff --git a/sqlglot/dialects/postgres.py b/sqlglot/dialects/postgres.py index 97589d5fbd..61a6dba438 100644 --- a/sqlglot/dialects/postgres.py +++ b/sqlglot/dialects/postgres.py @@ -742,3 +742,12 @@ def isascii_sql(self, expression: exp.IsAscii) -> str: @unsupported_args("this") def currentschema_sql...
diff --git a/tests/dialects/test_postgres.py b/tests/dialects/test_postgres.py index 957eb9d5b9..c732688e55 100644 --- a/tests/dialects/test_postgres.py +++ b/tests/dialects/test_postgres.py @@ -372,6 +372,14 @@ def test_postgres(self): pretty=True, ) + self.validate_all( + "SE...
[BUG] Conversion from SQL Server's DATEADD(quarter...) to PostgreSQL not working properly ## Type of issue: Bug Report Conversion from SQL Server's DATEADD(quarter...) to PostgreSQL not working properly ## Description When trying to convert SQL on read dialect 'tsql' for SQL Server's DATEADD(quarter...) the conversion...
2025-04-25T21:40:11Z
2025-04-25T21:40:11Z
0.3.88
[]
[ "tests/dialects/test_postgres.py::TestPostgres::test_array_length", "tests/dialects/test_postgres.py::TestPostgres::test_bool_or", "tests/dialects/test_postgres.py::TestPostgres::test_json_extract", "tests/dialects/test_postgres.py::TestPostgres::test_xmlelement", "tests/dialects/test_postgres.py::TestPostg...
pip install -e .; pip install pytest pytest-json-report;
pytest --json-report --json-report-file=report_pytest.json
python:3.11
{ "command_test_small": "pytest --json-report --json-report-file=report_pytest.json tests/dialects/test_postgres.py", "issue_number": 5013, "merge_commit": "60103020879db5f23a6c4a1775848e31cce13415", "merged_at": "", "pr_number": 5015, "score": { "complexity": -1, "task_correctness": -1, "test_c...
3,000
600
pytest --json-report --json-report-file=report_pytest.json tests/dialects/test_postgres.py
matthewwithanm/python-markdownify
matthewwithanm__python-markdownify-217
e29de4e75314daf9267f30f47fd7a091ef5f1deb
diff --git a/markdownify/__init__.py b/markdownify/__init__.py index 780761c..a43f3a7 100644 --- a/markdownify/__init__.py +++ b/markdownify/__init__.py @@ -650,6 +650,9 @@ def convert_pre(self, el, text, parent_tags): return '\n\n```%s\n%s\n```\n\n' % (code_language, text) + def convert_q(self, el, tex...
diff --git a/tests/test_conversions.py b/tests/test_conversions.py index 27951ee..6145411 100644 --- a/tests/test_conversions.py +++ b/tests/test_conversions.py @@ -305,6 +305,11 @@ def test_pre(): assert md("<p>foo</p>\n<pre>bar</pre>\n</p>baz</p>", sub_symbol="^") == "\n\nfoo\n\n```\nbar\n```\n\nbaz" +def te...
Inline Quotation element ignored Html that looks like this: ```html Here is <q>A Quote</q> from someone. ``` should be rendered as: ``` Here is “A Quote“ from someone. ``` https://developer.mozilla.org/en-US/docs/Web/HTML/Reference/Elements/q Solution: ```python def convert_q(self, el, text, parent_tags): ret...
@chrispy-snps: @colinrobinsonuib - good catch! We should probably use straight ASCII quotes for wider compatibility with downstream flows. Are you interested in opening a pull request and officially becoming a contributor?@colinrobinsonuib: Sure https://github.com/matthewwithanm/python-markdownify/pull/217
2025-04-28T10:37:33Z
2025-04-28T10:37:33Z
0.3.88
[]
[ "tests/test_conversions.py::test_kbd", "tests/test_conversions.py::test_hn_atx_headings", "tests/test_conversions.py::test_b", "tests/test_conversions.py::test_code", "tests/test_conversions.py::test_hn_atx_closed_headings", "tests/test_conversions.py::test_a_spaces", "tests/test_conversions.py::test_bl...
pip install -e .; pip install pytest pytest-json-report;
pytest --json-report --json-report-file=report_pytest.json
python:3.11
{ "command_test_small": "pytest --json-report --json-report-file=report_pytest.json tests/test_conversions.py", "issue_number": 216, "merge_commit": "0e1a849346f24e9b15eefb11752feaf7b4b821fa", "merged_at": "", "pr_number": 217, "score": { "complexity": -1, "task_correctness": -1, "test_completen...
3,000
600
pytest --json-report --json-report-file=report_pytest.json tests/test_conversions.py

SWE-MERA

Continuously updated SWE-MERA dataset

SWE-MERA splits:

  • dev: for testing (10 samples)
  • lite: presented at the leaderboard here (750 samples)
  • full: continuously updated to collect more data (2738 samples)

Load dataset

from datasets import load_dataset
ds = load_dataset("MERA-evaluation/SWE-MERA", split='dev')

Evaluation

Description

The main tool to validate tasks is repotest (available at PyPI or GitHub)

data.jsonl - dataset file, where after the agent run, the patch column was changed

Install dependencies

pip install repositorytest

Run evaluation

swemera --fn_input=data.jsonl --fn_output=submission.jsonl --column_patch=patch --mode=docker

If you don't want to use Docker and prefer Conda or local execution:

swemera --fn_input=data.jsonl --fn_output=submission.jsonl --column_patch=patch --mode=local

Schema

Column Name Type Description Is New Column
repo VARCHAR Repository name (e.g., GitHub repository) False
instance_id VARCHAR Unique identifier for task: f"{repo.replace('/', '_') + '' + pr_number}" False
base_commit VARCHAR Commit hash of the base code before patch applied False
patch VARCHAR Code patch or diff applied to the base_commit to be the correct solution False
test_patch VARCHAR Patch for test code, if separate from main code patch False
problem_statement VARCHAR Description or statement of the problem to solve False
hint_text VARCHAR Hints or tips for solving the problem from GitHub issue comments False
created_at VARCHAR Date when the instance was created False
closed_at VARCHAR Date when the instance was closed or resolved True
version VARCHAR Version identifier for the instance or dataset False
FAIL_TO_PASS LIST[VARCHAR] Test cases which were failing but later passed False
PASS_TO_PASS LIST[VARCHAR] Test cases which passed at all times False
environment_setup_commit VARCHAR Commit hash for environment setup configuration False
command_build VARCHAR Command used to build the repo True
command_test VARCHAR Command used to run the tests inside repo True
image_name VARCHAR Docker or container image name used for testing environment True
command_test_small VARCHAR Command to run a smaller subset of tests True
timeout_build INTEGER Timeout limit in seconds for build command True
timeout_test INTEGER Timeout limit in seconds for test command True
meta DICT[STR,ANY] Additional metadata about the instance*

*meta field description:

{
  "score": {
    "task_correctness": "INTEGER",
    "test_correctness": "INTEGER",
    "complexity": "INTEGER",
    "test_completeness": "INTEGER"
  },
  "type": "VARCHAR",
  "pr_number": "INTEGER",
  "issue_number": "INTEGER",
  "merged_at": "VARCHAR",
  "tag": "VARCHAR // Information on how data was collected",
  "merge_commit": "VARCHAR",
  "task_id": "VARCHAR // Latency identifier of the task",
  "url": {
    "issue": "VARCHAR",
    "pr": "VARCHAR",
    "diff": "VARCHAR"
  },
  "command_test_small": "VARCHAR // Command to run only a small number of tests"
}

Dev tasks Examples

Instances

Instance ID Short Title
reframe-0 Performance threshold goes to -inf when it should be zero.
pyflakes-1 Walrus operator + annotation can cause F821
sqlglot-2 MySQL dialect fails to parse PRIMARY KEY USING BTREE syntax
matchms-3 matchms fails when reading spectra where abundance is in scientific notation #809
guarddog-4 Add Mach-O magic bytes to bundled binary detector #523
pdoc-5 Include HTML headers in ToC
QCElemental-6 QCElemental allows floating point numbers for molecular charges, however when computing the spin with the fractional electron there is no way to represent the molecular multiplicity with just an integer.
sqlglot-7 TSQL: PRIMARY KEY constraint fails to parse if
sqlglot-8 [BUG] Conversion from SQL Server's DATEADD(quarter...) to PostgreSQL not working properly
python-markdownify-9 Inline Quotation element ignored
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