omicseye/seqLens_4096_512_46M-Mp
Fill-Mask • 46.7M • Updated • 9
text stringlengths 74 3.26k |
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assembly_accession seq_id assembly_id start sequence sequence_length split |
GCF_014696435.1 NZ_JACJQG010000017.1 15 46500 ctggtgtcatgaagcgggtagtttgagcgttaccgagtcggtagcagaagcagtatgtcgaattgcctatgaaatcggcgcaaaagcaattctttgtaatacttcttcgggaagtacagcccaactcgtatctaaataccgcccatccacaccaattattgccctcaccccagatgaaatggcttaccgtcagctagcactttcttggggcgtgattcccttattaattccgccagtccacaacgccgaagaaatgtttatgaatgtggtgaac... |
GCF_000333795.1 NZ_CAOU02000021.1 4 12400 gcaggttactgtataagcttcagcagtttttgtactcctttaaagcatcatattcctatatattaaatatagctggtgttctcaattttgttgatctatagtaaaattggctaaaacttccagtaataaacaacttttaacctagcagtactcaccataaaaacttaacaaaaatatgagtagtaaaaagattatgttgaaattaacttgacacatactacacattctatataatatattctatatctagagctaggaggtaatatggatacagggtc... |
GCF_001642055.1 NW_017306198.1 11 34100 tgcatggcactggtaagctgcatctttctgtaatccctggttccactgccttggtaagccgttgatcgacagcggctacacctgtcaaacctaattataatcaatactgacagccgtatctttgtaggataacacaattatcgcaacagctattcctcgtatcacagatcagttcaaagcgctcaacgacgtgggatggtatgggtcgtcatacctcctgacaacttgcgcgacgcaactgatctacggaaagttctatacatactactccatcaaatgg... |
GCF_001443605.1 NZ_CP013118.1 1527 4733700 catttcggcctcaggcttatctcccttgtaaaacttcataaattttttgcgttgttcgtcgcgttcttttatgcgtttaatagctgcttttttatcaaggttaaaccttttcattatttgatttattctgtattgatcaggggctattaatcttacatgcaatgattttttaatgtgttttgccaatacgcagcctgcacggcctacaatgattgcatgaccttgttcagcatattttttgacaatattgctaattaatctttttatttgaggatct... |
GCF_010729895.1 NZ_AP022612.1 560 1736000 tctccgcgaccggccatcatttcagcggtgacggtgcggacgaactccggcgccgactcgggcaccggcggtgccggtgcccacagcgaggtgaccgacgcgggcaccgcgatcttctgcaacccggccacggcgccgtcgacggcggccatttccttggccagcacctcggcgccccggttgccgtaggtgtgctgcaccgactccttgatccgggcgatggccaggtcccggggcaacacgtcggagatcgcgaagaagcaggtctgcaggacgat... |
GCF_030732975.1 NZ_JASHJV010000014.1 2 6200 cgccgatcctggtcttcgacgatgccgacatcgaggacgcggtcggtggcgcgatcctcggcaacttctattcctccggccaaatctgctcgaacggcacgcgcgtcttcgtccagcgcggcctgcacgacggcttcgtcgaacggctggtcgaacgcaccaggggcgcggtgatcggcgatccgctggatgaggcgaccagtttcggccctctggtttccgaagcgcaactcgacaaggtgcttggttatgtcgatattggccgcgcagaaggcg... |
GCF_903064685.1 NZ_CAJHIU010000002.1 395 1224500 accggcgcagcaatctggaccggttccggctcgctgctggcggaagccattcattcctttgccgattgcggcaatcaggtcttgctgtttatcggcatgaaacgctcggcccgggcagcaacccagcaccatcctatgggctatggccgggaagcgtatatctggtcgatgatggtagcgattacgctattctcggttggcggcttgttctcgatccacgaaggttggttgcgttttcacgaatcgcacaccgtggaaaacgccggtatgg... |
GCF_010093595.1 NW_022985458.1 60 186000 tactatatagagatataaacgcgtcctttatagataataaatagtagggttgtatatccggcagcgcagatgctctggataactataacctactcttagttgcctagttaaataagattaggccttatatatctctctaaacctgtaataacctttattatgccaattatacctatttaaaagccagtcttattaaagttgtggatattatctaggtagacgctatacttagctatagtcttttacataagagtaaaccacgtgttaataacctctagg... |
GCF_010722995.1 NZ_BLKT01000003.1 1031 3196100 accccggcggactgggcccggcagggcatggccgcgggaagtccgttcgcgctggcccacaacttcgcccagacgggtccgttccgtcccgcgaacacggtgcgcggagtcgacaacgtggtgctggccgggtcctcgacggtgcccggtgtgggagtgcccaccgccgtcatgtccgggcgcctggccgccgaccggatcaccgggaccccggtggcccggtccgtctccgaggtgcaccggtgagcgagaaatccgaactcgacgccgccg... |
GCF_022953055.1 NZ_JALJEJ010000002.1 51 158100 ctgcacggaaccacttcgctccccttttacggttttaaacacccttaccacattaacatggctgatggttgttcctttattttcgccggcggctaccctgctgaccgcacgttcctgaacaagggcaacgtttatcaactctttatcactgaagttttctaactggtaattaacgttcaactcgcggtttttgaatgatgccgagcaagcgatggaattatccggcaccctgcggatgttcgcattgatcaagttatgcagcgtgccagactg... |
GCF_009914755.1 NC_060925.1 24853 77044300 tagctgagtctaggcttcagcaatttgcagctccattattgtcaccagactgttttaggtcatttttttgctatgtctcttctaatatctaggcttccttgttcctggctattaaaggatacaaccttctcactaatttggcaaggtaatcaatatgctttcaataaatcccttttccacttgaatcaatcagaattgcactccattatctgcaattaaaaaccctgactgagccatttactaattaaatacattacactaaataattatattttat... |
GCF_028827155.1 NW_026622688.1 616 1909600 cgaggtcgcccgcatgctcgagatgcccccccatgcgtgtctacgaggttgctaccttctacaccatgtacaaccgtgatcccgttggcaagtacttcttgcagatctgcacaaccgtaagatcccggaatttttttttttttggcatatgccactgctttgctattttggaaactgataattggcttctttccagaccccctgccaactcggaggctgcggcagcgacgccatcgtcaaggctatcaacgagcacctcggcatcaccccggccaca... |
GCF_030818895.1 NZ_JAUTBA010000001.1 10 31000 ttgaaattacattttgtgtatagtgctctctatttttccgcctatataacattattcccttatacgatagcaccgccatgatgacatagatcaccatggtcaggctactgtaagaaaatataaaaagttggaaaacgtcaattatatcttggatcatattgtatacattatttttcgtgcagataatagtttagaatgcgctgttttcttaaaggcagatttaacgatttccatccgaattgattattgcgtactaagcgggcgagtattgcgg... |
GCF_030980095.1 NZ_CP133298.1 1766 5474600 gacgttttccatggccaggcgcagggtcaactggtcggtggcgcggtagctgctgtagaggtcataaacggtgtagggcttccagtcggccgggtaaacgccggtttgcgaggtggtcacacccgcgccgcctttgacgtagtaaccgccgctatagcgagcgcgaacgcccacatccaacttacgctcaaggaagcgcgcgcccagcgtcgcagtgccgcggtccatcggcatgtgctcggaggagcccaggatcgcactgcagctctgccccgca... |
GCF_016791605.1 NZ_JAETXN010000001.1 256 793600 tcctagagaaaatatatatattatggaaaatggtaatgtattagaaatctctgaagatggagctaaattagttgcagatgtaccatcaggagatattttggttgatggacttggaattggcgatgttggaaatattgtattaagagatagaaaacacttagcagaagatggtttaatcgttgtggttgttacaatttctaagaaagacggaaaagttatttcaggacctgacattatatctagaggatttgtatatgtaagagaatctggag... |
GCF_003184755.1 NW_020291598.1 74 229400 acggtgttggttctcggcatttcgttgacccgagtcgtatgggttgaatgggttgtgcgtcattgtttgcagcaactgccatgcgcctgtctgtctttttgtccgctgtgcatgcattaggtattttctcttttttccttcttttcttttattctatatcgacagagtagcttcgcttagctactgcatagttacatatatcatgcctcctccctcggatcaacgtcataatgtcgaccccccggaggagatcacctccgaggccgtccgcggcttctt... |
GCF_900454715.1 NZ_UGSZ01000001.1 528 1636800 tatctaagtaatagcaggaaatttttggaaactcttcatctaataaatcagtcataagttcaataagtggtccacaatgtgtacatctaattgcaccgaatattacaattcctgttaagttttttgttttttcgtaaaaatcataggaagaaatagtcttaatcctgtggtgatttctgctgtagatttcttttgaaaccctaagttctttcaaagattcagattcctgagataaggggtcgatatccttatttaattctgctccttcaacatt... |
GCF_024198175.1 NZ_JAJVKV010000002.1 30 93000 gccctgcaggcccagccggtggatgtcctcgttcatccgccgctccagccgcggggcgtgcacgaagcccgccgcctcgaactggcgccgccaccacgcgaaggacgcaatcgtcaggtgcccctccaggggccggccccactcgtcacgcgccaggtcctcctccggcaccgggccgggatactccggcccctgcgcccggtagtgctccagccgctccggccgcaccttcccgtcgaaccagccatccgggcccgtgtcgcacgggccgaag... |
GCF_015352445.1 NZ_JADKPO010000030.1 1 3100 ccaggagctgatcaagctcggcctggtcgaggagaagccctacaagatcttcggcgcgcaggcgacggggtgctcgccggtgtcggcggcctacaaggccggcaccgacgcgatccgtccggtcaagcccgacaccatcgccaagagcctggccatcggcaacccggccgacggcatctacgtgctcgacatctgccgccgaagcggaggtgcggtcgaggacgtcaccgacgacgaggtgcgccaggggatcttgctgctcgcgcgcaacgaggg... |
GCF_033458365.1 NW_026944408.1 1127 3493700 tctgtttagcctattagactagaccgcatcacgggcatgcaaccaattgaatcaaggtaactctgacgttgtcttcttactccttgacaacacaatcatcatcatcgctttttgtccgcctcagctgaactgaactcgacataaatcctagttacctataattctaatccccattcccacccaaccaacgggtacaaacgcaacttgaaacacacgaccgaattcgacactatctcaacacccagccgatatacatacgatggtcccgatcccgtc... |
GCF_014698505.1 NZ_JACJTD010000003.1 94 291400 gatggcgatcgcctcgtcagtgccttcagtggtggttggcaaatgcggatgagtttaggtaaaatcctgctgcaaaaacctgacttgttgctgctggatgaaccgactaaccacctagatttagaaaccattgagtggttggaaaattatctcagagggctgattacgccgatggtaatagtctctcatgaccgggagttccttgaccgcctctgcacccaaattgtggaaacagaacgtggcgtttccagtacctaccttggtaactactcg... |
GCF_003703815.1 NZ_RDQO01000002.1 206 638600 tgtcgagagaccgatgcttgtcgacctggcgctggcacaggtcgcggacggtgcttcccaggcgtatcagcagcgcgttcaaggcctggttgggaggggacatgcgaccggcatcgtgcgagccgggtgtcggctgtgagtggaacatggggatactcctgaacaagagcggatcggcgctcctcgcgggtggccgatccgcaagaacggtggatgctccggagagcgcggggactaccagtcgtacagcggcaagccgtccagcaccggcgcat... |
GCF_000340215.1 NW_006921533.1 1969 6103900 atactaaacgtcgctacgagacctacgagcaagagctcctagctattatcgaggcctttaagtattagaggcactacctcgatagggcttaatatacaatataggtctatatagactataacaacctccgtagaattacgaaggttactagggttataggtcgataggctagataggccgtctatctctataaaaagggttatgttagcaggtagatagggtagtagtaggtacaagtagtattcgataaggagctaggaggagagggaggaaggc... |
GCF_026914185.1 NC_070575.1 830 2573000 cggagctcgacttggccgtagcgcaaggagggaagccgcgcctccgtctggaggggctggttgagcgtatacaaccgaagtcctagggactcgaggaatgggtcctgtctaggacagggaagagagaaaaggggaaaagcccgacttacctagtagaaacggaagtcgggtcgagtgcgcagaggatgagaataagaaaggtggatcaggaaataaccccaatcgttgtgttcagcgtaattggttgaataaaacaataatgtctggtgtggtagctgat... |
GCF_900096975.1 NZ_FMYQ01000038.1 13 40300 atgggcgtaccctatcgccagttcgtcggcttcgacggcgtcggcgctgcgctgtggtccggcaccggtctcctgatcggcgtgctgttcgcgccgcagatcgacatgctgttcgccggcgcgagccggctcggccgtctcaccgccgtcgtggtggccgtgctcctgctgctctatgcgacctaccgctggcaacgccgccgccagctcatcaagaagctcgcgaacgcgcgcatcacggtggaggatctttaccgcgcgatgagcggcaagccgc... |
GCF_003202065.1 NZ_QJKF01000018.1 9 27900 gcgggctcgacctgcccggactgcggatcgagccggccgacgtggacaccggcgtcgccaagttcgatctgcagttcaccctgaccgaatcgcgaggggcgcaacgtgatccggcgggcatcacggtgtcggtgaactacgcgcgcgacctgttcgacgagccgaccgcgctgcgcctcggcacccgactcgtccggctgctcgccgccgtcgccgcgaatcccaccacggccgtgggtgatctggagttgctcgacgcggccgaatggtccgggctc... |
GCF_014649515.1 NZ_BMTE01000018.1 17 52700 aacctgggccgaggaccgccaccggccgtgcccccgtccgcggcgaacgccgtgcgcagccgctcccaggcgtagcgcgggtaggacaccggcagccccagggactccagcagggcccggtgccgtgccacgtgcccggtgtccagccggcccgcctcgcgggcgagttcggcggcgaacaccatgccgatggacagggcccggccgggtccgacccggtaattctcggcgtgttcgacggcgtgggcgagcgggtggccgtagtcgaggaactccc... |
GCF_028827525.1 NW_026623149.1 684 2120400 cgagcaatgtcgaggacaggccaggaaggaggcgtaaaaagtttcggaatatggcggagagcattgtggaaacttttaattgctcatttctcacccagcatctccttccgcatctcctcccgttgtatcctcgactcctccttagcctgagcccgctgcgcctcgagctgcgcgtgcttccgatcctgctcttcctgtgcggcgaaccaaactaaaacacaaagcgccgaattagccacacattcacacttgtatctagcggtctgcttccaacata... |
GCF_005771535.1 NZ_VANU01000001.1 260 806000 caaaaaattcaatcaaattaggcaaagatatattttaaaagagtataaaattgaaaaaagcaatacccacttaatatatattcttggttttttaatttttattttgattataactttatataaatatcacctaacaaaaatggaaaaattaaaactccaagaaaagttgaacaataaattaaatgccgaaaagtctgcacttattcaactaaaaactgctgggatttttcatgtaaaaaacaaccattttttatggacaaatgaaaaatttacta... |
GCF_001418255.1 NZ_LIPV01000015.1 2 6200 ttaagggcgaacagctcggtttcagtgagcagggccaggcggtcggctggcagcgagaatccgcgcgccagcggccccaccgccagggcgaagccggtcgtgccctggacgaagtcgtcccaactctccgcgggctgggccgacaggccggattcctgcagcagctcgcgcagggtttcgcggcgcccggcggattcggccagcagcagcgcgcgccggtgctgcgagcggccttcctccagccattgcgccaggcgcgccagcggccgcgtggcacgg... |
GCF_000320565.1 NW_016017390.1 17 52700 taaatctatagtaacaagtcggacctatatcctcttagaagtcttctttttttcttcctttttctccgatagataaatgaaatcgatccgacctagcgcgaaatttgttgtttttttatttttatttgtttctccctacttattttcgtacggagaaacgaagaggagagatagtaacagggtagatatcttatacattttatcgagtacgaacaaggcggagaggattaaaatttctaaaacggaagagaggatcatatagttcccacctagcttcgaa... |
GCF_011008945.1 NZ_WYCT01000105.1 6 18600 gacgtgctcccccacgcgggcgtcctgccgcccccgcccgcgcggcggacgccgtccgcccaggtcgcggatgccggcgtggtgcctttgtgcctcacacagcccgcacgggctctctgaggggcccaggagccacgggaggtgtcgccggtggggtccgaggtggagccgggggtctcagcaaccacgagccgccgggccgagctgaccgcggacaggccccgggtgccggccggggcctgaacggggccgcctctaccaccaggggcagcgcggca... |
GCF_910593825.1 NZ_CAJVAX010000012.1 33 102300 gctcatggcaacgttctcacggcgaccgcgggtgggaagaccgagaagtggcagtacgacagtgcggacaggctgaccaaccacaccgacggcctgggacataccacgacgtacacctacgacggcgacagcgcccggcctctgacggagagcggggccgcggggaccaccacctacacctacaactccagcgacctggtggagaccgagacgtcacctggcgggaatgtcaccacctacggctatgacgccgccggcaacctcacatcgacc... |
GCF_005943945.1 NZ_CP040710.1 249 771900 cgatgttttcggtatccaatccacttacaatatcaaattcgatacaactttttaaggcaaaggaaagtgaatccctttcccgatgaagcagtgtggtccgtttttccatatcctccttcaacagtacctttcgggaatcaccatccgcctcgaaaagttcttctccgttggagcggaggtataccccatacaacgataaactcatcactatggtaaagagcacggtgattacgagacatccacagccttgccaaattggtcgtttagcaggattgttcc... |
GCF_000308755.1 NZ_BAGF01000142.1 1 3100 gcgccgattcaggatttccctgacgcacgccgcatctggtcgtctgcttggtcgggtggggtgcctgcggggatgacgagcagagtcagctgggcgtcgttcgtgccgatcaggtgcatggtgccgggtggttggccggtatcgggtccgtgtacttcgacgccgtccgggttgtcgatgcggcgttggctgagactgatcgcgttccagtcgaagctgacgcgagcggtggggccgaggcgtggggtgagggcgctgatcaggtcgtgcagttcggcg... |
GCF_000143825.1 NZ_CM000961.1 217 672700 tcccggattgcaccgctgcgcttctcctcaatctctttaagccacttcttgtacttcttgctggtcttgttgcgcagatgcgaccagggctgcttctcggtggaaatcacccggatctgtgcaggcatggtgcgcgcaagccagccagcgaagtgcaccgcctcttccccggattgatcccagcccacagcgatgcgcaaagggcgctccggaccgacagaggttaggagctcaggagtgaggggtaaaggattcataatggcgcgcgaaagaaaggga... |
GCF_900109165.1 NZ_FNZF01000002.1 87 269700 acctgacagatgaccgttaccagccacgcctgatgcagtgcgctccgtgcagttgagaggatagaagaagaatggatcagtgcaaatgctgcaagatagctcatctggaagccgggcttggaaacggcgtgggggtcgatgagcaaaaacaaaatcattcctgctgaaaacagcaaatccaaacggggttttccggatttggattccggcatcagcagcataagcgaaataagaacggcccgccagacaggaggggccccgcctgccagcatcgca... |
GCF_903166545.1 NZ_CAESCH010000003.1 3 9300 tgaatttaatttaacaacaatgacaagagaagaacttgaacaagcaaataaagattaccaagaatatagagaacgctatgcctttcgtaagaaatacaaggatttaaacgaaggaaaatcactatatcattcttttccagtaggacaaaaagttactaatactcttaaagaattatcttctattgctagaagtgcaagaaaaagctctacagttactcaaagtattgatgatttcaaaagttaatgcgtagttcatatacagacctaaaaattaat... |
GCF_010722995.1 NZ_BLKT01000003.1 1298 4023800 cttggcgttccagccacgcggtggcggtggtgtattccccctcgggcagggcgtacagcatgtgcccattgatctcgctggcgccacgctcgtagaaccggcgcatcatcgccaggaaacacgacttgtacgacggggtcttgagattggtggcacccaacaggaacggctgatcgcgctcgtcggcgcggctgtcgatcaggttggcggcctcggcgtcggtgcgcgccacgatgatgccgggcactcccatgatgtcgagctggaagcggg... |
GCF_015910445.1 NZ_CP048882.1 1567 4857700 acgttgctgtagcccttctccgaactcttctggtacgcgtcggagatggtcgaggtgaagaccagggtgccggagacgaaggccacgccgagcatcacggcgagcacggtcatcagcagccgggccttgtgcgcgaagacgttgcgcaaggcagtacggagcatcggtttgtcctgggttctgggtttctgggaacgcggtatccagcggcccggcggtcctgggccggttccgggttcgtgctggtggttgcctcggcgggcggtgcgcggccgtg... |
GCF_001773325.1 NW_019173281.1 560 1736000 tgtcgggtctaggcgttccattgtctactgctgtggcaaataagctctcgccctccgagactcctgacttccaagttgttcgaccgaaagtacctagctcaacctctcccaaggccgtggaacgaaataagtacggccagcgtgtcgatcgacttgatttcaagagcatcccccgggatgatcttaaccgcctgaagaagctcaaattgtgcaactatcactttttgctcggggaatgtcctaatgaagagaactgctatcacgaccatgatcgcaa... |
GCF_003946485.1 NZ_RHOJ01000012.1 6 18600 aggtgctggtaggattcagggctttcttccatgagttccaccatgtcttgcagaatctcgtctgggtcaaggcggtagtcgttgtcgatttcttcgttatagtcgtcgatgaacacttcacgaccaactacggtcagggtggaagtcatcatctgtgatcaactcctttcgttagtggtaagcaaccgccgcagcgggcggtgcgcgagaggagtgggacagtgagctatttcttgtcattggtgtttggcttctcctgtggcttgaccggtgcggtg... |
GCF_016861975.1 NZ_BOMB01000032.1 54 167400 gcaccacgccgctgcaatggctgctgcggcaacggatccaccgcgcccaggagctgctggagaccaccgacctgtccgtcgagcagatctcccggtactgcgggttcggcaccgcggtggcgatgcgccagcacttcgcccggcacgtacggacctcgccgacggcgtaccggcggagtttccggtcgggcgtcacctgacgggtcgcccgaggtcggccgtaccgggtttccacccttgcggcggcgtggtggtgctgctggtcgacggcggcga... |
GCF_022869785.1 NZ_CP094997.1 1845 5719500 ttgaattgggcatccatttggtaagtccggttgctggctggcgggccaaataagttggtcgtggttgcagttagcgatacattgctgccggaaggatattcctttgccgcaccacttagatccacttttatccgatccggcataaattcttcaacgctaactgcatgcgacgcgagcagaatgtcattgccgttgtaaacttccagcacataggttccggtaagtccggccgcgtcaatcggaacttcaatttctactgcgccctggtcattcgtat... |
GCF_004117055.1 NZ_CP026363.1 1253 3884300 aatgtctcgtcgccgaaaatatgcagcattttgtacgggctgtgcacatcgaacaaaaagcttcccccgggagcaaggtgagcgaagacgcgccgaaacgtctcctgcacgtccgcttcttctgtcaggtagctgagagagtcgcacaaggaaatgaccgcgtccgcctccggcaaggaaagctcgcgcatatcctgctcgacccacgccacctctacttgctcctgccgcattttgtcgtaggcaatcgccagcatctcggcggacagatcgacgc... |
GCF_016861865.1 NC_054863.1 666 2064600 ccttcgtccccaatagtacgtcaataagccacaaggacggtttgacaatgtcaataacaaagctctggtgcagtgcgggaaagtgggaaaaacaaaaactcaaaagccataacatgcacaaacaggggaaagtgggcagacagtggtcgaaaaaccgtccttttgaagtctggtagatccgacgagcagtcgacgtcagatgaaaccacacttcaacaaaagactatttgttcgatttttgcatctccttcagtcctagtcacaccggccgtccacggat... |
GCF_003096195.1 NZ_CP023004.1 208 644800 tccccggctcaccgggacggttcgccctaccaaaaggtatttcctcgcgacaatttaaaccgaaacaacgccaatggcgaaatgtgcggtgccgttatactgcgcattaggcggaaggcggcggactgtctggcggggattggttttgcccaatgtaattttgggtcacgcggtaaaggagcaaggctatccatgtcagcataaagagcattgcgatgtcgccaacaagaagccctggatccagccaatataagcggggaactaatataaaaagaccaa... |
GCF_002893765.1 NZ_CP025938.1 567 1757700 tatttctgaaaatgtgaatattaaaatcaccgatattgaaggtaatttggttgccgaagcacaatcgaaaaccaatcagcgttacagtggttctaatttagaaattgatggtggaacagcatattggaacggaaaaaaccttgcgaataataacgtagcttcaggcgtatacctcgtgatgttggccgatttagatacctttgaaaccaaagttattaaactcatggttgtacgctaatgttattcactactcctgctatcgtgttgtctaagctcaa... |
GCF_003258295.1 NZ_QKYN01000088.1 6 18600 agcacggtcagccgcggacgttcactcatgccccgattatccagtaaccgcgagggttctcgaaccatcgggcggcacgagcggtggggttcaggagacagcgccgccgaactcgcgctccagcgaggcgatctggttcgtaccgaggccgcgcacgcggcgcgactcggagatgcccagacgctccatgatctgcttggcccggaccttgccgacacccgggagggactccagcagggcggagaccttcatcttgccgatgacgtcgttctcctggc... |
GCF_004000985.1 NZ_BIMH01000014.1 17 52700 cgtgctgttgttcggcgttccgcatgagaaggacgctcacgggagttcggcttacgatccgaacgggatcgtccagcaggcgacgcgccaagtgaaggcatgggcgccggatctgctcgtggtcgcggatacgtgcttatgtcaatttacggatcacggccattgcggcgtggtgcattacgacgaggccaaagggcgggccgacgtgctgaatgatccgtcgctcgaactgctcgtcaagacagcggtatcgcaggccgaggccggcgcggacatc... |
GCF_900070205.1 NZ_FAOO01000009.1 11 34100 ctcaaagtctccaccacaaaacaaaaaatttatcaaaatctaaaatccacctgaccaatatcatacaactgctggacaatattaaacacagacatttctatttatgcatctgatttgacaaacctttgatataccgtttgatgaccaaaattaaatccgcattttgctaaaaaacatcaaaattgataaatttttacaaaataactcagcatatgtgtaaaatgaagaaggtatcactaaaagggttgacgttacctgagcttgaaaattttgtcgt... |
GCF_000695095.2 NZ_CP011454.1 219 678900 acccccgcttcgaacccattccggtaacccccgccgcccactacatgatgggcggtgtggtgaccgatctggcgggccgctccagcatctcgcggctgtacgcggtgggggaagtggcccgtaccggtgtccatggtgccaaccggctggcgtccaactcattgctcgaagggttggtgtttgccgagcgcgttgcgcgcgacatggtgcagacaccggaagagctcgctatccccgaactcacctcgtgggatgtcccgccgctggatgatcgcggcg... |
GCF_025685655.1 NZ_JAGSYG010000011.1 2 6200 ggtgagataggcgatgggcagcaccgacgcctgcgcaggagtaagtcttttgggaagcgctttgacattccgcccagacacagtaacaaacgcgctgaagcttcgtggagcatacgcaaagacgcggtcccctatgttaaacccgctgtttatccccgctcgacaaacgatgcctgcacactcgccacctagctgttgaggatatccaggcaacataccgagcgcgttcattacatcgcggaagttcaggccctgcgcttcaacttgaatctcaac... |
GCF_002259585.1 NZ_MWWS01000006.1 14 43400 aacctggactgtttgccggcttggatcgagcgtcacccaataagcagaacgtgcatagaggttagggtatggacttaccaactcacctacgcgcagcctcctgtgcagagccttatactcggcattattgcttccaaaacagcagcgaccctggctttcggcttgccttaccagagcatctactcgtttattgtgtttcatattagcgagtgtaggaatatcgagtagctatcacgagaactaccgaatactgtggtcaaacatgggcacatcacta... |
GCF_000835475.1 NW_015971609.1 6 18600 tcagagaatctttgtctaggatccaggctcttttttgtaaagatttgatgagccgagcgcgtccctccagcgccttcttcaagtcaggcgtcttaaatgacgcctcgacgatgagttcaaggctctcatctgtcttgctcttccgaattggccacacttcaatgaacagcttgaacccatcccaaataccttcgaaccgcttagcgtgcactggtccgtaaactatggagttggcgagatgctgcgtaccccagtcttcggaggaccaattcttaaattct... |
GCF_900078395.1 NZ_FKLA01000009.1 379 1174900 tttgagtatacgccaatgcaggttaaacagagcgttgtgggatacggcaaggcggaaaagcatcaggttatggagatgacccggcagctgctgggactcagcgaggtgccgcggccggacgacacggctgatgcgctcgcgctggccatttgccatgcacacagtgcaaattcccttttgacctatctcaaatgaatgcaggaaatccgccctcacagggtacctcataaaaggagaaactggaatgtattattcgctgaccggaaaattgagc... |
GCF_900086705.1 NZ_LT575483.1 567 1757700 taaaattttatttataaaaatctaatgtatccatccacacgcagatctccttttgtcattgccacaaaaggagcaaaaagtctaggccacgatcctccaaaatacttgaaaaaatagtggcttgctaaaatccttaactcgcttcgctcaaacaaacggatttcttcacgcaagccactattttttcatccttcggaacgtatttttccggaaaaggccgtgaacgaaaaaactgccgcattagaatgcgacagctagactgtaacctcatcaaggcg... |
GCF_031451595.1 NZ_JARWAG010000001.1 94 291400 ggccatcacttcactgcgccgtagcgcagccgtcttcatcgagagctcgacatgatcaagaaccctaccgcgatgctgactgcagccgggctggccctgctgatccttcccaccgcagccaccgccgccactctgacgctgcccgccgatgcccgcgttgccgttcaggtgatcgacgacctgctcctcggcgacgacagcgaccgtcgcgacgatatcctgatgcgcccggtgagcgatgacgccgatgccacgcacgagctgccggagtat... |
GCF_000011105.1 NC_000961.1 545 1689500 gttcttcgtcacaaagaagaagtatgccctgatagatgaggaaggaaagatagtgacaagaggtctagagatagttaggagggactggagtgagatagcaaaggagacccaagcaagagttttagaggccatactcaagcacggtaatgttgaagaggccgtcaagatagttaaggatgtaaccgaaaagctgacaaattatgaagttcccccagaaaagctggtcatatacgagcagataacgaggccaataaatgaatacaaggcaatagggccccac... |
GCF_033439085.1 NW_026944330.1 971 3010100 cggtgctggtgccttcgtgtcccccggtgacagcctggccatcattgctcaccatgccaagctgattccgtatttcaagaagaatggggtctacgggttggctcgcagcatgcccacgtccggggccgttgatctggtggcgaagaagcagggcctggactgttacgaggtgcccacggggtggaagttcttttgtgccctgttcgatgccgacaagctgtctatctgcggcgaggagtcgttcgggaccggaagtaaccacatccgggagaaagac... |
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Pretraining dataset
For pretraining and validation, we curated a dataset comprising all 19,551 representative genomes sourced from the National Center for Biotechnology Information (NCBI) database by February 23, 2024, including 18,268 bacterial, 647 archaeal, 577 fungal, 40 viral, and 1 human reference genome. Then, to create samples, we created chunks of 3200 long nucleotide sequences with 100 bases overlapping. The resulting train set has 27,831,882 samples, the validation set has 3,478,985, and the test set has 3,478,986 samples.
Dataset Structure
Each dataset sample contains the following information:
assembly_accession: Genome assembly identifierseq_id: Accession identifierassembly_id: Line number in the filestart: Start position of the sequence read within the accession IDsequence: DNA sequence datasequence_length: Length of the DNA sequence samplesplit: Dataset split category
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