output stringlengths 926 21.5k | instruction stringlengths 45 1.08k |
|---|---|
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Dose@12:12:51</query_... |
I want to find all instances of the medication "Acetaminophen" with a dose between 100 and 70 milligrams (mg) that have been administered to patients in the i2b2 database, where the timing is not restricted and the specificity scale is set to 0, and the panel accuracy scale is set to 100, with a total of 1 item occurr... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Acetaminophen@12:13:5... |
I want to find all instances of acetaminophen medication use with a dose between 10 and 70 mg, at any time, without being a synonym, and with a specificity scale of 0 and accuracy scale of 100. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Acetaminophen@12:12:1... |
I want to find all instances of acetaminophen medication use with a dose less than 1000 mg, considering any time frame, and with a specificity scale of 0 and an accuracy scale of 1000. The query will be applied to the first panel of the i2b2 cell, and the medication will be identified by its key "\\i2b2_MEDS\i2b2\Medi... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Dose@12:12:39</query_... |
I want to find all instances where acetaminophen was prescribed at a dose less than 1000 mg within the medication domain of the central nervous system agents, analgesics, and miscellaneous analgesics categories. The query should have a specificity scale of 0, accuracy scale of 1000, and apply to any time frame (ANY). ... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Acetaminophen@12:14:1... |
I want to find all instances of acetaminophen medication usage where the dosage is between 10 and 70 milligrams, with a specificity scale of 0 and any timing, and the query name is Acetaminophen@12:14:1. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory system@12... |
I want to find all patients with diagnoses related to the circulatory system (ICD codes 390-459) as their admit diagnosis, without any specific time constraint, and with a high accuracy scale of 100, using a panel with one item named "Circulatory system" and its corresponding icon, class, and tooltip. The query is nam... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory system@13... |
I want to find all diagnoses related to the circulatory system (ICD-9 codes 390-459) using the i2b2 query builder, with a specificity scale of 0 and a panel accuracy scale of 100, within a specified time frame (from April 1, 20001 onwards). This query is focused on a single panel and does not include synonyms, with th... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory system@13... |
I want to find all diagnoses related to the Circulatory system (ICD-9 codes 390-459) with a specificity scale of 0, accuracy scale of 100, and no inversion applied, for any time frame. This query will return results from the "Circulatory system" panel, which is the first panel with a total of 1 item occurrence, and th... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory system@13... |
I want to find any records related to the circulatory system with a specificity scale of 0 and a panel accuracy scale of 100, within a specific time range of 13:42:18 to 13:49:37, using the panel number 1 and its timing set to ANY, with a total item occurrence of 1, and the item name being "Circulatory system@13:42:18... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory system@13... |
I want to find any diagnoses related to the Circulatory system, including diseases and conditions in the range of ICD-9 codes 390-459, with a specificity scale of 0 and a high accuracy scale of 100, for a single item on panel 1 with no inversion, using the i2b2 query builder. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Admit-Compl-Bone @15:... |
I want to find patients who have been diagnosed with malignant neoplasms of lymphoid, hematopoietic and related tissue (ICD10/ICD9 codes C81-C96) and have had a complete blood count test and a bone marrow stain test performed during their admission. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Sagitta-Sagitta@10:39... |
I want to find all subjects with "Sagittal" images from both the "First Sample" and "Fourth Sample" in the "Raw Images" folder, with an accuracy scale of 1000%, and with a "Clinical Dementia Rating (CDR)" of "mild dementia" within any time frame. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>(t) WBC (Group:WBC)-D... |
I want to find all instances where a patient had a WBC (White Blood Cell) test within the same encounter as a diagnosis related to the digestive system. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Admit-Compl-Bone @15:... |
I want to find patients with a diagnosis of malignant neoplasms of lymphoid, hematopoietic and related tissue (ICD-9 codes C81-C96) who have had a complete blood count (CBC) test and a bone marrow stain performed during their admission. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Admit-Compl-Bone @15:... |
I want to find patients with a diagnosis of malignant neoplasms of lymphoid, hematopoietic and related tissue (ICD10 code C81-C96) who had a complete blood count (CBC) test and a bone marrow stain test performed during their admission. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Sagittal@10:38:09</qu... |
I want to find all Sagittal images from the "First Sample" folder in the "Raw Images" directory within the "oasis" folder in the BIRN database, with a high specificity and any timing. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Sagitta-Sagitta@10:38... |
I want to find all instances of "Sagittal" in the "Raw Images" folder within the "First Sample" and "Fourth Sample" subfolders under the "Oasis" folder in the "BIRN" folder. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Admit D-Complet@15:09... |
I want to find patients who have been diagnosed with malignant neoplasms of lymphoid, hematopoietic, and related tissue (ICD10 codes C81-C96) and have had a complete blood count (CBC) test performed during their admission. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name> 55--Male-Livin@17:0... |
I want to find patients who are between the ages of 5 and 64 years old or are 65 years old or older, who are male, and are currently living. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>mild de-1 year @17:26... |
I want to find patients with a diagnosis of mild dementia who are 1 year old, with no specific time frame restriction. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Inpatient visit@14:23... |
I want to find all inpatient visits with any timing and 100% accuracy within a panel with a specificity scale of 0 and one total item occurrence, and the item name is "Inpatient visit" with an icon of LA and class of ENC, and the item key is "\\i2b2_VISIT\i2b2\Visit Details\Visit type\Inpatient visit\" in the i2b2 que... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>MMSE score@10:43:12</... |
I want to find all instances where the MMSE score was measured at any time, with a specificity scale of 0 and an accuracy scale of 100, and the result is displayed on panel 1 of the i2b2 query builder interface. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Certain conditi@10:44... |
I want to find diagnoses related to certain conditions originating in the perinatal period (P0-P96) with any timing, using a specificity scale of 0, a panel timing of ANY, an accuracy scale of 100, and with the item being inverted (0). The query should be named "Certain conditi@10:4:38" and have a class of ENC. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Certain conditions or... |
I want to find all instances of diagnoses related to certain conditions originating in the perinatal period (p00-p96) within the ICD10_ICD9 coding system, with a specificity scale of 0 and accuracy scale of 100, considering any timing and with a panel number of 1. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Arterial vascular dis... |
I want to find all instances of Arterial Vascular Disease diagnoses within the Circulatory System category (ICD-9 codes 40-47) that have either been recorded as Admit Diagnosis or Principal Diagnosis, with no specificity scale or timing applied, and a 100% accuracy scale for the panel. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Male@15:14:37</query_... |
I want to find male patients with any diagnosis related to the digestive system and who have been prescribed medications for the central nervous system. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Certain conditions or... |
I want to find diagnoses related to certain conditions originating in the perinatal period (codes P00-P96) using the ICD10_ICD9 classification system with a high level of specificity (100) and any timing, displayed in a panel with panel number 1 and a total of 1 item occurrence, with the item being labeled as "Certain... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Certain conditions or... |
I want to find all diagnoses related to certain conditions that originated in the perinatal period, specifically within the ICD-10 and ICD-9 code range of P00-P96, with a high level of specificity and any timing, including both diagnoses and synonyms. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Asthma-Prednis@21:04:... |
I want to find patients who have been diagnosed with asthma and have been prescribed either prednisone or prednisolone during the same visit. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Male@15:13:49</query_... |
I want to find all male patients with any diagnosis related to the digestive system (ICD-9 codes 520-579) in the i2b2 database. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Certain conditi@15:51... |
I want to find all diagnoses related to certain conditions originating in the perinatal period (p0-p96) with a specificity scale of 0, accuracy scale of 100, and any timing, grouped into a panel with panel number 1 and panel timing of ANY, and with the icon FA. The query will not be inverted, and the class will be ENC... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Coagu-Circu- 45-@14:... |
I want to find patients with coagulation lab tests and circulatory system diagnoses who are between the ages of 45 and 54 years old. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Coagu-Circu- 75-@14:... |
I want to find patients who have had Coagulation lab tests, have Circulatory system diagnoses, and are between the ages of 75-84 years old, with no specific time restrictions on when these events occurred. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Certain conditi@13:52... |
I want to find all diagnoses related to certain conditions that originated in the perinatal period (from conception to 6 days after birth), specifically those with ICD-10 or ICD-9 codes ranging from P00 to P96, and display them in the query panel with a specificity scale of 0, accuracy scale of 100, and no inversion. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Certain conditi@13:52... |
I want to find all patients with certain conditions that originated in the perinatal period (from the time of conception to the first 28 days after birth) using ICD-10 and ICD-9 diagnosis codes, specifically codes P0-P96, with a high level of specificity (100%), and no inversion applied, in a single panel, with the qu... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Asthma-Prednis@21:02:... |
I want to find patients with a diagnosis of asthma who have been prescribed either prednisone or prednisolone medication at any time. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Admit D-Admit D@19:29... |
I want to find patients who have been admitted with a diagnosis of Psychosis, specifically Drug psychoses, and have any diagnosis of Psychosis within the Mental Disorders category (290-319) in their medical records. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Asthma@20:55:07</quer... |
I want to find all patients who have been diagnosed with asthma, specifically looking at chronic lower respiratory diseases (J40-J47) within the ICD-10 and ICD-9 coding systems. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory sys@00:53... |
I want to find all diagnoses related to the Circulatory system (ICD codes 390-459) and Certain conditions originating in the perinatal period (ICD codes P00-P96) with a specificity scale of 0, a panel timing of ANY, and a total item occurrence of 1. The query is not inverted and the date range is from December 1, 1979... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>(t) Cough-Acute upper... |
I want to find patients who have had an event of cough and an event of acute upper respiratory infections of multiple or unspecified sites within the same encounter, with the cough event occurring first and the acute upper respiratory infection event occurring after it, between May 3, 200000 and May 4, 20050. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Operations on r@21:06... |
I want to find all procedures related to operations on the respiratory system and operations on the nose, mouth, and pharynx that have been performed on patients within the specified time frame, with a specificity scale of 0 and an accuracy scale of 100, using the ICD9 (Inpatient) coding system. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Gastritis, unsp@12:49... |
I want to find all cases of "Gastritis, unspecified, without bleeding" diagnosed in the ICD-10 and ICD-9 coding systems within the Diseases of the Digestive System (K0-K94) and Diseases of the Esophagus, Stomach, and Duodenum (K20-K31) categories. The query will search for this condition at any time and has a specific... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>(t) Cough-Acute upper... |
I want to find all patients who have been diagnosed with cough as a symptom associated with acute upper respiratory infections of multiple or unspecified sites within the specified date range. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Esophageal refl@21:06... |
I want to find all instances of patients with a diagnosis of Esophageal reflux in the i2b2 database, with any level of specificity and accuracy, using the ICD-10 code 530.81. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Asthma@21:10:56</quer... |
I want to find all patients with a diagnosis of asthma in the Respiratory system, Chronic obstructive diseases category, with a specificity scale of 0 and a total occurrence of 1, using the i2b2 query builder. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Pregn-Demog- 18-@16:... |
I want to find patients with a diagnosis related to pregnancy, childbirth, or the puerperium (ICD10 code O0-O9) and their demographic information, specifically those between the ages of 18-34 years old. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Pregn-Demog- 18-@16:... |
I want to find all patients with a diagnosis related to pregnancy, childbirth, or the puerperium (ICD-10 codes O0-O9), who have demographic information recorded in the OASIS database, and are between the ages of 18 and 34 years old. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Gender@09:19:45</quer... |
I want to find the gender of the patient at any time with 1000% accuracy, using the "Demographics" panel and the "Gender" item in the i2b2 query builder. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diseases of the@10:48... |
I want to find diagnoses related to diseases of the musculoskeletal system and connective tissue (m0-m9) using the ICD-10 and ICD-9 coding systems, with any timing and a specificity scale of 0, and a panel accuracy scale of 100, with a single item occurrence and a panel number of 1. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Right-Statu-Visit@09:... |
I want to find patients who are right-handed, have a socioeconomic status of 1, and had a visit at the age of 46 years old. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin-Cefazolin-C... |
I want to find instances of Cefazolin medication in the i2b2 database where the dose is less than or equal to 1000 mg, administered once daily (QD frequency), and the route of administration is through injection. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Pregn-Demog- 18-@16:... |
I want to find all patients who have been diagnosed with pregnancy, childbirth, or puerperium-related conditions (ICD10 codes O0-O9) and are between the ages of 18-34 years old, with no specific time constraints on when the diagnosis was made. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Certain conditi@15:35... |
I want to find all diagnoses related to certain conditions originating in the perinatal period (p0-p96) with a specificity scale of 0 and a panel accuracy scale of 100, using any timing and without inverting the results, with a single panel and a single item within the panel. The item is named "Certain conditions orig... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory system@11... |
I want to find all diagnoses related to the circulatory system (ICD-9 codes 390-459) within the specified date range of January 3, 2023 to April 21, 2023, with a specificity scale of 0, accuracy scale of 100, and a single occurrence requirement, using the panel 1 of the query builder. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory system@11... |
I want to find all diagnoses related to the circulatory system (ICD-9 codes 390-459) recorded in the i2b2 database, with no specificity or timing constraints, and no synonyms included. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diabetes mellit@12:24... |
I want to find all instances of "Diabetes mellitus" in the Endocrine disorders category under Other endocrine gland diseases with a specificity scale of 0, accuracy scale of 100, and any timing, including all diagnoses in the i2b2 database. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory system@11... |
I want to find all diagnoses related to the circulatory system (ICD-9 codes 390-459) that have been recorded in the i2b2 database, with no specificity scale applied, and the results will include any time frame (ANY timing). The panel will have a high accuracy scale of 100 and only one item occurrence. The query will n... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Inpatient visit@14:23... |
I want to find all instances of inpatient visits with no specific time constraint and high accuracy, and display them on the first panel of the query results. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Appendicitis@14:23:48... |
I want to find all cases of patients with a diagnosis of appendicitis in the i2b2 database, using the specific code range 540-543 in the Digestive system category (520-579), with a specificity scale of 0, accuracy scale of 100, and no time constraints. The query is named "Appendicitis@14:23:48" and includes a single p... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diagnostic and @17:41... |
I want to find all patients who have undergone diagnostic and nonsurgical procedures, with a specificity scale of 0 and a panel accuracy scale of 100, regardless of the timing of the procedure, and the query will be named "Diagnostic and @17:41:06." |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>WBC (Group:WBC)@13:31... |
I want to find all instances where the lab test result for WBC (White Blood Cell Count) is equal to the value 'H' in the category of hematology under the group WBC, with any timing, and the specificity scale set to 0, accuracy scale set to 100, and panel number and timing set to 1. This query is designed to search for... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name> 35-44 years o@14:51... |
I want to find patients aged 35-44 years old with any timing and 100% accuracy scale in the demographics category using the i2b2 query builder. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Visit at age 10@12:18... |
I want to find all visits where the patient was 10 years old at the time of the visit. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>MM Asthma@10:05:04</q... |
I want to find all patients with a diagnosis of asthma in the Respiratory system category, specifically within the Chronic obstructive diseases subcategory, with a high level of specificity (4) and any timing (ANY) for analysis. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Asthm-Predn-Predn@10:... |
I want to find patients with a diagnosis of asthma who have been prescribed either prednisolone or prednisone at any time. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Operations on e@15:29... |
I want to find all inpatient procedures related to operations on the ear, as recorded in the ICD9 (International Classification of Diseases, 9th Revision) medical coding system, within a specific time frame (ANY). The query will have a specificity scale of 0 and an accuracy scale of 100, indicating that the results sh... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Male@16:14:20</query_... |
I want to find all male patients in the i2b2 database, with no specific timing constraints and a high accuracy level, using the Demographics panel and the Gender Male item. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Male-Skin -Circu@16:1... |
I want to find all male patients with any skin diseases and any diagnoses related to the circulatory system. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Digesti-Circula@14:10... |
I want to find all diagnoses related to the Digestive system (ICD codes 520-579) and Circulatory system (ICD codes 390-459) with a specificity scale of 0 and any timing, with both panels having an accuracy scale of 100 and no inversion. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Male-Skin di@16:15:37... |
I want to find all male patients with any skin disease diagnoses in the i2b2 database. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Principal Diagn@16:58... |
I want to find all diagnoses related to injury and poisoning (ICD-9 codes 80-999) that are marked as the principal diagnosis in the dataset. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Asthma-Prednis@10:15:... |
I want to find all patients with a diagnosis of asthma who have also been prescribed prednisolone medication. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Laboratory Test@13:26... |
I want to find all laboratory tests and diagnoses recorded in the i2b2 database, with a specificity scale of 0 and an accuracy scale of 100, and the results should include any time frame (ANY). |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Laboratory Test@13:27... |
I want to find all laboratory tests, diagnoses, and length of stay information within the i2b2 database for any time period, with 100% accuracy and no inversion, and display the results in a panel with one row for each category. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Principal Diagn@10:55... |
I want to find all encounters with a principal diagnosis of diseases related to the nervous system, as classified under ICD-10 and ICD-9 codes, within the range of G00-G9. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Operations on r@10:19... |
I want to find all procedures related to operations on the respiratory system and nose, mouth, and pharynx, as classified by the ICD9 (Inpatient) coding system, with a specificity scale of 0 and accuracy scale of 100, regardless of the timing. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Asthma@01:38:12</quer... |
I want to find all instances of patients with a diagnosis of asthma in the respiratory system, specifically chronic obstructive diseases, within the timeframe of any date. The specificity scale is set to 0, meaning that all instances will be included, and the accuracy scale is set to 100, indicating high confidence in... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Certain-Disease@13:02... |
I want to find patients with diagnoses related to certain infectious and parasitic diseases (ICD codes A0-B9) and diseases of the digestive system (ICD codes K0-K94), with no specific time frame and high accuracy, using the i2b2 query builder. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name> 5 day-Clinica@08:05... |
I want to find all patients with a length of stay of 5 days or more in the visit details, and their clinical measures and demographics information from the BIRN oasis data source. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Princip-Seconda@10:56... |
I want to find all patients who have a principal diagnosis of any disease of the nervous system (ICD-10 codes G0-G9) and a secondary diagnosis of nerve, nerve root, or plexus disorders (ICD-10 codes G50-G59). This query will return a list of patients with both a primary diagnosis related to diseases of the nervous sys... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Operati-Esophag@10:20... |
I want to find all patients who have undergone operations on the respiratory system or nose, mouth, and pharynx, and have been diagnosed with esophageal reflux at any time. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Asthma@01:50:57</quer... |
I want to find patients with a diagnosis of asthma during the same visit. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Asthma@01:51:18</quer... |
I want to find patients with a diagnosis of asthma (ICD-9 code 493) recorded during the same visit, with a specificity scale of 0 and a panel accuracy of 100%, using the i2b2 query builder. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>>= 65 y-Disease@12... |
I want to find patients who are 65 years old or older and have a diagnosis related to diseases of the esophagus. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cefazolin@15:35:42@15... |
I want to find all instances where the medication "Cefazolin" was administered at 15:35:42 in the i2b2 database, with no specificity scaling applied and a high accuracy level. The query should search for any time and include a single panel with a specific tooltip description. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Laboratory Test@13:01... |
I want to find all laboratory tests with any timing and specificity, with 1000% accuracy, and at least one occurrence of the term "Laboratory Tests" within the i2b2 LABS/Labtests/ hierarchy. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Princ-Secon-Secon@10:... |
I want to find patients who have a principal diagnosis of any disease in the range of g0-g9 (diseases of the nervous system) and a secondary diagnosis of nerve, nerve root, and plexus disorders in the range of g50-g59, specifically cranial nerve disorders in diseases classified elsewhere (g53). |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Sagitta-Right H@11:06... |
I want to find all records where the subject has a sagittal MRI image from the first sample in the "oasis" folder and their hand orientation is right-handed, as indicated in the "Demographics" section of the data. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Princip-Seconda@10:58... |
I want to find all patients with any diagnosis in the range of G0-G9 (Diseases of the nervous system) as their principal diagnosis and any diagnosis in the range of G50-G59 (Nerve, nerve root, and plexus disorders) as their secondary diagnosis. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Sagitta-Left Ha@11:07... |
I want to find all patients with a Sagittal image in the 'First Sample' folder in the 'Raw Images' subfolder under the 'oasis' folder in the 'BIRN' folder, and who have a left-handed orientation recorded in the 'Hand Orientation' subfolder under the 'Demographics' folder in the 'BIRN' folder. The query will search for... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Princip-Female@12:11:... |
I want to find female patients with a principal diagnosis of hematologic diseases (ICD-9 codes 280-289) in their medical records. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Route-Female@18:02:20... |
I want to find all female patients who have a record of receiving medications through injection route. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>CK-MB QUANT (Group:CP... |
I want to find all instances of CK-MB QUANT (Group:CPK-MB) lab tests in the i2b2 database, regardless of the time frame, with a specificity scale of 0 and an accuracy scale of 100, where the test results are not marked as "TEST NOT PERFORMED". The query should be a part of panel 1 and should have a hierarchy level of ... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Acute Rheumatic@16:03... |
I want to find patients with a diagnosis of Acute Rheumatic fever in the Circulatory system category of the ICD-9 coding system, with a specificity scale of 0 and any timing, and a total of 1 occurrence per patient. The panel will have an accuracy scale of 100, and the query will not be inverted. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Diseases of the skin ... |
I want to find diagnoses related to diseases of the skin and subcutaneous tissue, as classified under ICD-10 codes L0-L9, with a specificity scale of 0, panel timing set to ANY, and a total of 1 item occurrence, using the i2b2 query builder tool. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Circulatory sys@14:51... |
I want to find all diagnoses related to the circulatory system (ICD codes 390-459) with a specificity scale of 0, accuracy scale of 100, and a panel timing of ANY. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>CK-MB QUANT (Group:CP... |
I want to find all instances of CK-MB QUANT (Group:CPK-MB) lab tests with any timing, at 1000% accuracy, with any specificity scale, and constrained by values of 'TEST NOT PERFORMED', 'NP', and 'POSITIVE' in the 'Labtests', 'Chemistry', and 'Cardiac Tests' categories, using the i2b2 query builder. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>ABiologicals@15:57:56... |
I want to find all instances of medications categorized under the term "Biologicals" within the i2b2 system using the provided query builder XML. |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Certain infectious an... |
I want to find diagnoses related to certain infectious and parasitic diseases (ICD-10 codes A0-B9) from the ICD-9 Certification of Medical Diagnoses field in the i2b2 data repository, with any timing, a specificity scale of 0, a panel accuracy scale of 100, and a single item occurrence, using the ENC (Encounter) class... |
```xml
<?xml version="1.0" encoding="UTF-8" standalone="yes"?>
<ns4:query_definition xmlns:ns2="http://www.i2b2.org/xsd/cell/crc/psm/1.1/" xmlns:ns4="http://www.i2b2.org/xsd/cell/crc/psm/querydefinition/1.1/" xmlns:ns3="http://www.i2b2.org/xsd/cell/crc/psm/analysisdefinition/1.1/">
<query_name>Cough-Acute u@15:02:2... |
I want to find patients who have been diagnosed with acute upper respiratory infections of multiple and unspecified sites and have experienced cough symptoms during the same visit, with a high level of specificity and accuracy. |
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