wellbench / DEPLOY.md
monteirot's picture
Upload 3 files
347de8b verified

Deploying the upgraded Hugging Face dataset card

This folder contains drop-in replacements for the metadata files in the monteirot/wellbench dataset repo:

File Replaces
README.md The current 376-byte README that only says "Benchmark data: …"
.gitattributes The current .gitattributes (recommended LFS rules)

Your existing croissant.json (31.9 kB) and the data folders (synthetic_datasets/, CTGAN_synthetic_data/) are not modified.


How to upload

Option A — Web UI (one file at a time)

  1. Open https://huggingface.co/datasets/monteirot/wellbench/tree/main.
  2. Click the existing README.mdEdit (pencil icon) → paste the new contents of README.mdCommit changes.
  3. Repeat for .gitattributes.

Option B — huggingface-cli (recommended for both files at once)

pip install -U huggingface_hub
huggingface-cli login

cd huggingface/    # this folder
huggingface-cli upload monteirot/wellbench README.md       --repo-type dataset
huggingface-cli upload monteirot/wellbench .gitattributes  --repo-type dataset

Option C — Git over HTTPS (full repo flow)

git lfs install
git clone https://huggingface.co/datasets/monteirot/wellbench
cd wellbench

cp ../huggingface/README.md       README.md
cp ../huggingface/.gitattributes  .gitattributes

git add README.md .gitattributes
git commit -m "Upgrade dataset card and LFS rules"
git push

After uploading — verify in this order

  1. Card YAML parses cleanly. Refresh https://huggingface.co/datasets/monteirot/wellbench. The left rail should now show:

    • Tasks: Tabular Regression · Time Series Forecasting
    • Modalities: Tabular
    • Tags: synthetic-data · synthetic-tabular · well-logs · petrophysics · pore-pressure · ctgan · physics-based · benchmark · neurips · …
    • License: MIT
    • Size: 100K < n < 1M
  2. All six configs appear. The Dataset Viewer top-bar should show the selector with: physics_zone_1 (default) · physics_zone_2 · physics_zone_3 · ctgan_zone_1 · ctgan_zone_2 · ctgan_zone_3. Each should expose its three named splits.

  3. The Viewer renders rows. Pick physics_zone_1 / missa_keswal_01 — you should see numerical columns DEPTH, GR, DT, RHOB, RT, HP, OB, DT_NCT, PPP. If column types look wrong, the auto-Parquet conversion needs a re-run; click Refresh dataset in the Settings.

  4. load_dataset round-trips. From a fresh Python:

    from datasets import load_dataset
    ds = load_dataset("monteirot/wellbench", "physics_zone_1")
    print(ds)
    df = ds["missa_keswal_01"].to_pandas()
    assert {"DEPTH","GR","DT","RHOB","RT","HP","OB","DT_NCT","PPP"} <= set(df.columns)
    
  5. Croissant validates. The Hub auto-generates a Croissant record from the README YAML at the /croissant endpoint. Confirm it's well-formed:

    pip install "mlcroissant[parquet]"
    mlcroissant validate \
      --jsonld https://huggingface.co/api/datasets/monteirot/wellbench/croissant
    # exit 0 → ready for the NeurIPS D&B submission requirement
    

    Optional: run the same validator on the manually authored croissant.json you already host:

    curl -L https://huggingface.co/datasets/monteirot/wellbench/resolve/main/croissant.json \
      -o /tmp/croissant.json
    mlcroissant validate --jsonld /tmp/croissant.json
    

Croissant: the two files explained

There are now effectively two Croissant records for this dataset, and that's fine:

Source Generated from Use it for
…/api/datasets/monteirot/wellbench/croissant README YAML (auto) Discovery, NeurIPS D&B compliance check
…/resolve/main/croissant.json Hand-authored The mlc.Dataset("croissant.json") example in your code, custom record sets

Recommended: keep both. The auto-generated one is regenerated on every push and always reflects the current YAML; the hand-authored one lets you expose richer record sets (like your physics-samples example) that the auto-generator doesn't infer from filenames alone.

If the two ever drift in licence, citation, or column types, fix the hand-authored file — reviewers will compare them.


Optional next steps

These are not in this folder, but are worth doing before NeurIPS submission:

  1. Add a Croissant-RAI block to croissant.jsondataLifecycle, dataCollection, dataPreprocessing, dataLimitations, dataBiases, personalSensitiveInformation. Use https://croissant-editor.com/.

  2. Convert CSVs to Parquet for the Viewer to run faster and column types to be preserved without inference. Hugging Face will auto-convert on the refs/convert/parquet branch, but committing Parquet directly gives you control over schemas and row-group sizes.

  3. Mint a Zenodo DOI by tagging a release of the GitHub repo and enabling the Zenodo–GitHub integration. Add the DOI to both the GitHub README and the Citation block of this dataset card.

  4. Cross-link: ensure the Hugging Face dataset card and the GitHub README both link bidirectionally and that the BibTeX entries match.