dataset stringclasses 45
values | id stringlengths 17 64 | messages listlengths 2 2 |
|---|---|---|
science.pico_ner | science.pico_ner.1827 | [
{
"content": "You will be shown an abstract from a biomedical research paper. Given this abstract, your task is to extract all unique entities of the following types: [\"Participant\", \"Outcome\", \"Intervention\"].\n\nPlease return the output as a JSON object of the format: {\"Participant\": [\"patients with ... |
science.scicite_classification | science.scicite_classification.56 | [
{
"content": "You will be presented with a citation sentence from a research paper. Classify the intent behind this citation by choosing from one of the following categories:\n\n- Method: Cites the paper for its methodology or procedure.\n- Background: Cites the paper to provide background information.\n- Resul... |
science.qasa_abstractive_qa | science.qasa_abstractive_qa.802 | [
{
"content": "You will be shown an excerpt from a computer science research paper, followed by a question about the paper. Please answer the question given the context. Do not include any text in your response other than the answer.\n\nContext: Before a face image is fed to an FR module, face anti-spoofing, whi... |
science.scireviewgen_multidoc_summarization | science.scireviewgen_multidoc_summarization.9346 | [
{
"content": "You are presented with multiple paper abstracts, a literature review title, and a specific chapter title. Your task is to write a focused literature review chapter that aligns with the given chapter title. The review should synthesize the content from the provided abstracts, draw connections betwe... |
science.pico_ner | science.pico_ner.4487 | [
{
"content": "You will be shown an abstract from a biomedical research paper. Given this abstract, your task is to extract all unique entities of the following types: [\"Participant\", \"Outcome\", \"Intervention\"].\n\nPlease return the output as a JSON object of the format: {\"Participant\": [\"patients with ... |
science.healthver_entailment | science.healthver_entailment.1568 | [
{
"content": "You will be shown a claim about public health and the abstract of a biomedical research paper. Each sentence from the abstract will be on a separate line. Your task is to return a JSON object with two fields:\n\n- \"verdict\": The fact-checking verdict. If the information in the abstract supports ... |
science.data_reco_mcq_mc | science.data_reco_mcq_mc.2080 | [
{
"content": "You are provided with a research question, keyphrases about the question, a description of candidate datasets and dataset options. Read the description of popular datasets provided below and select the ones that can be used to validate the following research question. Use your knowledge of machine... |
science.scientific_lay_summarisation_elife_single_doc_summ | science.scientific_lay_summarisation_elife_single_doc_summ.441 | [
{
"content": "You will be presented with the abstract, introduction, and discussion section from a biomedical research article. Your task is to create a summary that a layperson can understand, capturing the essence of the research article. Keep essential scientific terms, but ensure that the language remains c... |
science.multixscience_multidoc_summarization | science.multixscience_multidoc_summarization.10176 | [
{
"content": "You are provided with the abstract of a scientific paper and the abstracts of the papers it references. Your task is to write a Related Work section for the main paper. This section should concisely summarize and integrate the key points from the cited abstracts, reflecting how they relate to the ... |
science.bioasq_general_qa | science.bioasq_general_qa.227 | [
{
"content": "You will be shown a question, followed by excerpts from biomedical research papers. Please answer the question based on the provided context. Do not include any text in your response other than the answer.\n\nQuestion: What is the Timothy syndrome?\n\nContext: A point mutation in the gene encoding... |
science.ncbi_ner | science.ncbi_ner.252 | [
{
"content": "You will be shown an abstract from a biomedical research paper. Given this abstract, your task is to extract all unique entities of the following types: [\"Disease\"].\n\nPlease return the output as a JSON object of the format: {\"Disease\": [\"COVID-19\", ...]}. The keys should be entity types an... |
science.bioasq_general_qa | science.bioasq_general_qa.820 | [
{
"content": "You will be shown a question, followed by excerpts from biomedical research papers. Please answer the question based on the provided context. Do not include any text in your response other than the answer.\n\nQuestion: What is Heterochromia Iridis?\n\nContext: The purpose of this study is to repor... |
science.genia_ner | science.genia_ner.1085 | [
{
"content": "You will be shown an abstract from a biomedical research paper. Given this abstract, your task is to extract all unique entities of the following types: [\"RNA\", \"CellType\", \"CellLine\", \"Protein\", \"DNA\"].\n\nPlease return the output as a JSON object of the format: {\"DNA\" : [\"TAL1\", ..... |
science.scientific_papers_summarization_single_doc_pubmed | science.scientific_papers_summarization_single_doc_pubmed.6459 | [
{
"content": "You will be presented with the full text of a biomedical research paper. Please write an abstract for this paper. Your response should only include the abstract and no additional text.\n\nPaper text:\nwe obtained data on persons with hiv / aids and tb from the national databank at the centers for ... |
science.multixscience_multidoc_summarization | science.multixscience_multidoc_summarization.6591 | [
{
"content": "You are provided with the abstract of a scientific paper and the abstracts of the papers it references. Your task is to write a Related Work section for the main paper. This section should concisely summarize and integrate the key points from the cited abstracts, reflecting how they relate to the ... |
science.acl_arc_intent_classification | science.acl_arc_intent_classification.1013 | [
{
"content": "You will be presented with a citation segment from the section of an NLP research paper, as well as the context surrounding that citation. Classify the intent behind this citation by choosing from one of the following categories:\n- Background: provides context or foundational information related ... |
science.mslr2022_cochrane_multidoc_summarization | science.mslr2022_cochrane_multidoc_summarization.1455 | [
{
"content": "You will be presented with a collection of medical randomized controlled trial (RCT) reports addressing a shared clinical question -- for instance, the efficacy of a medical intervention on a disease or condition. Given the titles and abstracts of these reports, your task is to generate the conclu... |
science.scientific_papers_summarization_single_doc_arxiv | science.scientific_papers_summarization_single_doc_arxiv.78721 | [
{
"content": "Write an abstract for the research paper below. Your response should only include the abstract and no additional text.\n\nArticle text:\nearly ultraviolet ( uv ) emission from type ia supernovae ( sne ia ) is poorly known by now . only a very few brightest events have been observed a decade ago w... |
science.scientific_lay_summarisation_plos_single_doc_summ | science.scientific_lay_summarisation_plos_single_doc_summ.806 | [
{
"content": "You will be presented with the abstract, introduction, and discussion section from a biomedical research article. Your task is to create a summary that a layperson can understand, capturing the essence of the research article. Keep essential scientific terms, but ensure that the language remains c... |
science.bioasq_factoid_qa | science.bioasq_factoid_qa.987 | [
{
"content": "You will be shown biomedical passages and your task is to answer the provided question. Provide a concise and accurate response and do not include any additional text in the response other than the answer.\n\nQuestion: How is ZP-PTH delivered to patients?\n\nContext: To evaluate the clinical PK/PD... |
science.scicite_classification | science.scicite_classification.4653 | [
{
"content": "You will be presented with a citation sentence from a research paper. Classify the intent behind this citation by choosing from one of the following categories:\n\n- Method: Cites the paper for its methodology or procedure.\n- Background: Cites the paper to provide background information.\n- Resul... |
science.scientific_papers_summarization_single_doc_pubmed | science.scientific_papers_summarization_single_doc_pubmed.93467 | [
{
"content": "You will be presented with the full text of a biomedical research paper. Please write an abstract for this paper. Your response should only include the abstract and no additional text.\n\nPaper text:\nthe eukaryotic pathogen database ( eupathdb ) has been developed as a bioinformatics resource cen... |
science.multixscience_multidoc_summarization | science.multixscience_multidoc_summarization.25240 | [
{
"content": "You are provided with the abstract of a scientific paper and the abstracts of the papers it references. Your task is to write a Related Work section for the main paper. This section should concisely summarize and integrate the key points from the cited abstracts, reflecting how they relate to the ... |
science.mslr2022_cochrane_multidoc_summarization | science.mslr2022_cochrane_multidoc_summarization.1447 | [
{
"content": "You will be presented with a collection of medical randomized controlled trial (RCT) reports addressing a shared clinical question -- for instance, the efficacy of a medical intervention on a disease or condition. Given the titles and abstracts of these reports, your task is to generate the conclu... |
science.genia_ner | science.genia_ner.1170 | [
{
"content": "You will be shown an abstract from a biomedical research paper. Given this abstract, your task is to extract all unique entities of the following types: [\"RNA\", \"CellType\", \"CellLine\", \"Protein\", \"DNA\"].\n\nPlease return the output as a JSON object of the format: {\"DNA\" : [\"TAL1\", ..... |
science.qasa_abstractive_qa | science.qasa_abstractive_qa.657 | [
{
"content": "You will be shown an excerpt from a computer science research paper, followed by a question about the paper. Please answer the question given the context. Do not include any text in your response other than the answer.\n\nContext: Extensive studies have been conducted to find a better activation f... |
science.chemprot_ner | science.chemprot_ner.942 | [
{
"content": "You will be shown an abstract from a biomedical research paper. Given this abstract, your task is to extract all unique entities of the following types: [\"Chemical\", \"Protein\"].\n\nPlease return the output as a JSON object of the format: {\"Chemical\" : [\"Dexamethasone\", ...], \"Protein\" : ... |
science.scireviewgen_multidoc_summarization | science.scireviewgen_multidoc_summarization.22721 | [
{
"content": "You are presented with multiple paper abstracts, a literature review title, and a specific chapter title. Your task is to write a focused literature review chapter that aligns with the given chapter title. The review should synthesize the content from the provided abstracts, draw connections betwe... |
science.pubmedqa_qa | science.pubmedqa_qa.239 | [
{
"content": "You will be shown an abstract from a research paper and a corresponding research question. Determine the answer to the research question based on the context provided. Your answer should be one of: \"YES\", \"NO\", or \"MAYBE\".\n\nAbstract:\n(OBJECTIVES) To study the relationship between coronary... |
science.bioasq_general_qa | science.bioasq_general_qa.199 | [
{
"content": "You will be shown a question, followed by excerpts from biomedical research papers. Please answer the question based on the provided context. Do not include any text in your response other than the answer.\n\nQuestion: what is the role of erythropoietin in cardiac regeneration after myocardial inf... |
science.scireviewgen_multidoc_summarization | science.scireviewgen_multidoc_summarization.21697 | [
{
"content": "You are presented with multiple paper abstracts, a literature review title, and a specific chapter title. Your task is to write a focused literature review chapter that aligns with the given chapter title. The review should synthesize the content from the provided abstracts, draw connections betwe... |
science.scireviewgen_multidoc_summarization | science.scireviewgen_multidoc_summarization.73405 | [
{
"content": "You are presented with multiple paper abstracts, a literature review title, and a specific chapter title. Your task is to write a focused literature review chapter that aligns with the given chapter title. The review should synthesize the content from the provided abstracts, draw connections betwe... |
science.bioasq_general_qa | science.bioasq_general_qa.364 | [
{
"content": "You will be shown a question, followed by excerpts from biomedical research papers. Please answer the question based on the provided context. Do not include any text in your response other than the answer.\n\nQuestion: Describe the isolation of transcription factor complexes by in vivo biotinylati... |
science.scireviewgen_multidoc_summarization | science.scireviewgen_multidoc_summarization.51069 | [
{
"content": "You are presented with multiple paper abstracts, a literature review title, and a specific chapter title. Your task is to write a focused literature review chapter that aligns with the given chapter title. The review should synthesize the content from the provided abstracts, draw connections betwe... |
science.pico_ner | science.pico_ner.1378 | [
{
"content": "You will be shown an abstract from a biomedical research paper. Given this abstract, your task is to extract all unique entities of the following types: [\"Participant\", \"Outcome\", \"Intervention\"].\n\nPlease return the output as a JSON object of the format: {\"Participant\": [\"patients with ... |
science.pico_ner | science.pico_ner.169 | [
{
"content": "You will be shown an abstract from a biomedical research paper. Given this abstract, your task is to extract all unique entities of the following types: [\"Participant\", \"Outcome\", \"Intervention\"].\n\nPlease return the output as a JSON object of the format: {\"Participant\": [\"patients with ... |
science.healthver_entailment | science.healthver_entailment.2639 | [
{
"content": "You will be shown a claim about public health and the abstract of a biomedical research paper. Each sentence from the abstract will be on a separate line. Your task is to return a JSON object with two fields:\n\n- \"verdict\": The fact-checking verdict. If the information in the abstract supports ... |
science.medmentions_ner | science.medmentions_ner.412 | [
{
"content": "You will be shown an abstract from a biomedical research paper. Given this abstract, your task is to extract all unique entities of the following types: [\"Finding\", \"Bacterium\", \"ProfessionalOrOccupationalGroup\", \"InjuryOrPoisoning\", \"Eukaryote\", \"BodySystem\", \"Virus\", \"ResearchActi... |
science.craftchem_ner | science.craftchem_ner.1882 | [
{
"content": "You will be presented with a sentence from biomedical research text. Extract all terms that correspond to chemical entities of biological interest (ChEBI).\nReturn your identified terms in a JSON array, formatted like this: [\"Entity1\", \"Entity2\", ...].\nIf no such entities are detected, respon... |
science.drug_combo_extraction_re | science.drug_combo_extraction_re.1096 | [
{
"content": "You will be shown a paragraph from a biomedical research article. Your task is to extract all drug combinations appearing in a specific sentence within the paragraph. Each drug combination should be assigned to one of the following three categories:\n\n- POS: Indicates a positive interaction betwe... |
science.chemdner_ner | science.chemdner_ner.3295 | [
{
"content": "You will be shown an abstract from a biomedical research paper. Given this abstract, your task is to extract all unique entities of the following types: [\"Chemical\"].\n\nPlease return the output as a JSON object of the format: {\"Chemical\": [\"Arsenic\", ...]}. The keys should be entity types a... |
science.medmentions_ner | science.medmentions_ner.1384 | [
{
"content": "You will be shown an abstract from a biomedical research paper. Given this abstract, your task is to extract all unique entities of the following types: [\"Finding\", \"Bacterium\", \"ProfessionalOrOccupationalGroup\", \"InjuryOrPoisoning\", \"Eukaryote\", \"BodySystem\", \"Virus\", \"ResearchActi... |
science.bioasq_yesno_qa | science.bioasq_yesno_qa.316 | [
{
"content": "You have to answer a biomedical question in binary format, i.e., only yes and no are acceptable answers. A list of paragraphs is provided as context to help you answer the question.\n\nQuestion: Is COL5A2 gene associated to ischemic heart disease?\n\nContext: Analysis of a gene co-expression netwo... |
science.drug_combo_extraction_re | science.drug_combo_extraction_re.1172 | [
{
"content": "You will be shown a paragraph from a biomedical research article. Your task is to extract all drug combinations appearing in a specific sentence within the paragraph. Each drug combination should be assigned to one of the following three categories:\n\n- POS: Indicates a positive interaction betwe... |
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