target stringlengths 20 113k | src_fm stringlengths 11 86.3k | src_fm_fc stringlengths 21 86.4k | src_fm_fc_co stringlengths 30 86.4k | src_fm_fc_ms stringlengths 42 86.8k | src_fm_fc_ms_ff stringlengths 43 86.8k |
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@Test(expected = BadRequestException.class) public void testNihCallbackBadRequest() throws Exception { when(nihApi.nihCallback(any())).thenThrow(new ApiException(400, "Bad Request")); service.postNihCallback(new FirecloudJWTWrapper()); } | @Override public void postNihCallback(FirecloudJWTWrapper wrapper) { NihApi nihApi = nihApiProvider.get(); retryHandler.run( (context) -> { return nihApi.nihCallback(wrapper); }); } | FireCloudServiceImpl implements FireCloudService { @Override public void postNihCallback(FirecloudJWTWrapper wrapper) { NihApi nihApi = nihApiProvider.get(); retryHandler.run( (context) -> { return nihApi.nihCallback(wrapper); }); } } | FireCloudServiceImpl implements FireCloudService { @Override public void postNihCallback(FirecloudJWTWrapper wrapper) { NihApi nihApi = nihApiProvider.get(); retryHandler.run( (context) -> { return nihApi.nihCallback(wrapper); }); } @Autowired FireCloudServiceImpl(
Provider<WorkbenchConfig> configProvider,
... | FireCloudServiceImpl implements FireCloudService { @Override public void postNihCallback(FirecloudJWTWrapper wrapper) { NihApi nihApi = nihApiProvider.get(); retryHandler.run( (context) -> { return nihApi.nihCallback(wrapper); }); } @Autowired FireCloudServiceImpl(
Provider<WorkbenchConfig> configProvider,
... | FireCloudServiceImpl implements FireCloudService { @Override public void postNihCallback(FirecloudJWTWrapper wrapper) { NihApi nihApi = nihApiProvider.get(); retryHandler.run( (context) -> { return nihApi.nihCallback(wrapper); }); } @Autowired FireCloudServiceImpl(
Provider<WorkbenchConfig> configProvider,
... |
@Test public void findCriteriaByExceptions() { try { controller.findCriteriaBy(1L, null, null, false, null); fail("Should have thrown a BadRequestException!"); } catch (BadRequestException bre) { assertEquals( "Bad Request: Please provide a valid domain. null is not valid.", bre.getMessage()); } try { controller.findCr... | @Override public ResponseEntity<CriteriaListResponse> findCriteriaBy( Long cdrVersionId, String domain, String type, Boolean standard, Long parentId) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType(type); return ResponseEntity.ok( new CriteriaListResponse() .items(cohortBuilderServ... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaBy( Long cdrVersionId, String domain, String type, Boolean standard, Long parentId) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType(type); return Response... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaBy( Long cdrVersionId, String domain, String type, Boolean standard, Long parentId) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType(type); return Response... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaBy( Long cdrVersionId, String domain, String type, Boolean standard, Long parentId) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType(type); return Response... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaBy( Long cdrVersionId, String domain, String type, Boolean standard, Long parentId) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType(type); return Response... |
@Test public void findCriteriaByDemo() { DbCriteria demoCriteria = DbCriteria.builder() .addDomainId(DomainType.PERSON.toString()) .addType(CriteriaType.AGE.toString()) .addCount(0L) .addParentId(0L) .build(); cbCriteriaDao.save(demoCriteria); assertEquals( createResponseCriteria(demoCriteria), controller .findCriteria... | @Override public ResponseEntity<CriteriaListResponse> findCriteriaBy( Long cdrVersionId, String domain, String type, Boolean standard, Long parentId) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType(type); return ResponseEntity.ok( new CriteriaListResponse() .items(cohortBuilderServ... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaBy( Long cdrVersionId, String domain, String type, Boolean standard, Long parentId) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType(type); return Response... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaBy( Long cdrVersionId, String domain, String type, Boolean standard, Long parentId) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType(type); return Response... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaBy( Long cdrVersionId, String domain, String type, Boolean standard, Long parentId) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType(type); return Response... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaBy( Long cdrVersionId, String domain, String type, Boolean standard, Long parentId) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType(type); return Response... |
@Test public void findCriteriaAutoCompleteMatchesSynonyms() { DbCriteria criteria = DbCriteria.builder() .addDomainId(DomainType.MEASUREMENT.toString()) .addType(CriteriaType.LOINC.toString()) .addCount(0L) .addHierarchy(true) .addStandard(true) .addSynonyms("LP12*[MEASUREMENT_rank1]") .build(); cbCriteriaDao.save(crit... | @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType(type); validateTerm(term); return ResponseEntity.ok( new Crit... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType... |
@Test public void findCriteriaAutoCompleteMatchesCode() { DbCriteria criteria = DbCriteria.builder() .addDomainId(DomainType.MEASUREMENT.toString()) .addType(CriteriaType.LOINC.toString()) .addCount(0L) .addHierarchy(true) .addStandard(true) .addCode("LP123") .addSynonyms("+[MEASUREMENT_rank1]") .build(); cbCriteriaDao... | @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType(type); validateTerm(term); return ResponseEntity.ok( new Crit... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType... |
@Test public void findCriteriaAutoCompleteSnomed() { DbCriteria criteria = DbCriteria.builder() .addDomainId(DomainType.CONDITION.toString()) .addType(CriteriaType.SNOMED.toString()) .addCount(0L) .addHierarchy(true) .addStandard(true) .addSynonyms("LP12*[CONDITION_rank1]") .build(); cbCriteriaDao.save(criteria); asser... | @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType(type); validateTerm(term); return ResponseEntity.ok( new Crit... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType... |
@Test public void findCriteriaAutoCompleteExceptions() { try { controller.findCriteriaAutoComplete(1L, null, "blah", null, null, null); fail("Should have thrown a BadRequestException!"); } catch (BadRequestException bre) { assertEquals( "Bad Request: Please provide a valid domain. null is not valid.", bre.getMessage())... | @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType(type); validateTerm(term); return ResponseEntity.ok( new Crit... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findCriteriaAutoComplete( Long cdrVersionId, String domain, String term, String type, Boolean standard, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateType... |
@Test public void findCriteriaByDomainAndSearchTermMatchesSourceCode() { DbCriteria criteria = DbCriteria.builder() .addCode("001") .addCount(10L) .addConceptId("123") .addDomainId(DomainType.CONDITION.toString()) .addGroup(Boolean.TRUE) .addSelectable(Boolean.TRUE) .addName("chol blah") .addParentId(0) .addType(Criter... | @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); return ResponseEntity.ok( cohortBuilderService.findCriteriaByDomain... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... |
@Test public void findCriteriaByDomainAndSearchTermLikeSourceCode() { DbCriteria criteria = DbCriteria.builder() .addCode("00") .addCount(10L) .addConceptId("123") .addDomainId(DomainType.CONDITION.toString()) .addGroup(Boolean.TRUE) .addSelectable(Boolean.TRUE) .addName("chol blah") .addParentId(0) .addType(CriteriaTy... | @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); return ResponseEntity.ok( cohortBuilderService.findCriteriaByDomain... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... |
@Test public void findCriteriaByDomainAndSearchTermDrugMatchesStandardCodeBrand() { DbCriteria criteria1 = DbCriteria.builder() .addCode("672535") .addCount(-1L) .addConceptId("19001487") .addDomainId(DomainType.DRUG.toString()) .addGroup(Boolean.FALSE) .addSelectable(Boolean.TRUE) .addName("4-Way") .addParentId(0) .ad... | @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); return ResponseEntity.ok( cohortBuilderService.findCriteriaByDomain... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... |
@Test public void findCriteriaByDomainAndSearchTermMatchesStandardCode() { DbCriteria criteria = DbCriteria.builder() .addCode("LP12") .addCount(10L) .addConceptId("123") .addDomainId(DomainType.CONDITION.toString()) .addGroup(Boolean.TRUE) .addSelectable(Boolean.TRUE) .addName("chol blah") .addParentId(0) .addType(Cri... | @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); return ResponseEntity.ok( cohortBuilderService.findCriteriaByDomain... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... |
@Test(expected = ServerErrorException.class) public void testNihCallbackServerError() throws Exception { when(nihApi.nihCallback(any())).thenThrow(new ApiException(500, "Internal Server Error")); service.postNihCallback(new FirecloudJWTWrapper()); } | @Override public void postNihCallback(FirecloudJWTWrapper wrapper) { NihApi nihApi = nihApiProvider.get(); retryHandler.run( (context) -> { return nihApi.nihCallback(wrapper); }); } | FireCloudServiceImpl implements FireCloudService { @Override public void postNihCallback(FirecloudJWTWrapper wrapper) { NihApi nihApi = nihApiProvider.get(); retryHandler.run( (context) -> { return nihApi.nihCallback(wrapper); }); } } | FireCloudServiceImpl implements FireCloudService { @Override public void postNihCallback(FirecloudJWTWrapper wrapper) { NihApi nihApi = nihApiProvider.get(); retryHandler.run( (context) -> { return nihApi.nihCallback(wrapper); }); } @Autowired FireCloudServiceImpl(
Provider<WorkbenchConfig> configProvider,
... | FireCloudServiceImpl implements FireCloudService { @Override public void postNihCallback(FirecloudJWTWrapper wrapper) { NihApi nihApi = nihApiProvider.get(); retryHandler.run( (context) -> { return nihApi.nihCallback(wrapper); }); } @Autowired FireCloudServiceImpl(
Provider<WorkbenchConfig> configProvider,
... | FireCloudServiceImpl implements FireCloudService { @Override public void postNihCallback(FirecloudJWTWrapper wrapper) { NihApi nihApi = nihApiProvider.get(); retryHandler.run( (context) -> { return nihApi.nihCallback(wrapper); }); } @Autowired FireCloudServiceImpl(
Provider<WorkbenchConfig> configProvider,
... |
@Test public void findCriteriaByDomainAndSearchTermMatchesSynonyms() { DbCriteria criteria = DbCriteria.builder() .addCode("001") .addCount(10L) .addConceptId("123") .addDomainId(DomainType.CONDITION.toString()) .addGroup(Boolean.TRUE) .addSelectable(Boolean.TRUE) .addName("chol blah") .addParentId(0) .addType(Criteria... | @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); return ResponseEntity.ok( cohortBuilderService.findCriteriaByDomain... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... |
@Test public void findCriteriaByDomainAndSearchTermDrugMatchesSynonyms() { jdbcTemplate.execute( "create table cb_criteria_relationship(concept_id_1 integer, concept_id_2 integer)"); DbCriteria criteria = DbCriteria.builder() .addCode("001") .addCount(10L) .addConceptId("123") .addDomainId(DomainType.DRUG.toString()) .... | @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); return ResponseEntity.ok( cohortBuilderService.findCriteriaByDomain... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListWithCountResponse> findCriteriaByDomainAndSearchTerm( Long cdrVersionId, String domain, String term, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); validateTerm(term); retur... |
@Test public void findStandardCriteriaByDomainAndConceptId() { jdbcTemplate.execute( "create table cb_criteria_relationship(concept_id_1 integer, concept_id_2 integer)"); jdbcTemplate.execute( "insert into cb_criteria_relationship(concept_id_1, concept_id_2) values (12345, 1)"); DbCriteria criteria = DbCriteria.builder... | @Override public ResponseEntity<CriteriaListResponse> findStandardCriteriaByDomainAndConceptId( Long cdrVersionId, String domain, Long conceptId) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); return ResponseEntity.ok( new CriteriaListResponse() .items( cohortBuilderService.findStandardCriteri... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findStandardCriteriaByDomainAndConceptId( Long cdrVersionId, String domain, Long conceptId) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); return ResponseEntity.ok( new CriteriaL... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findStandardCriteriaByDomainAndConceptId( Long cdrVersionId, String domain, Long conceptId) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); return ResponseEntity.ok( new CriteriaL... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findStandardCriteriaByDomainAndConceptId( Long cdrVersionId, String domain, Long conceptId) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); return ResponseEntity.ok( new CriteriaL... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findStandardCriteriaByDomainAndConceptId( Long cdrVersionId, String domain, Long conceptId) { cdrVersionService.setCdrVersion(cdrVersionId); validateDomain(domain); return ResponseEntity.ok( new CriteriaL... |
@Test public void findDrugBrandOrIngredientByName() { DbCriteria drugATCCriteria = DbCriteria.builder() .addDomainId(DomainType.DRUG.toString()) .addType(CriteriaType.ATC.toString()) .addParentId(0L) .addCode("LP12345") .addName("drugName") .addConceptId("12345") .addGroup(true) .addSelectable(true) .addCount(12L) .bui... | @Override public ResponseEntity<CriteriaListResponse> findDrugBrandOrIngredientByValue( Long cdrVersionId, String value, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok( new CriteriaListResponse() .items(cohortBuilderService.findDrugBrandOrIngredientByValue(value, limit))); } | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findDrugBrandOrIngredientByValue( Long cdrVersionId, String value, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok( new CriteriaListResponse() .items(cohortBuilder... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findDrugBrandOrIngredientByValue( Long cdrVersionId, String value, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok( new CriteriaListResponse() .items(cohortBuilder... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findDrugBrandOrIngredientByValue( Long cdrVersionId, String value, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok( new CriteriaListResponse() .items(cohortBuilder... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaListResponse> findDrugBrandOrIngredientByValue( Long cdrVersionId, String value, Integer limit) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok( new CriteriaListResponse() .items(cohortBuilder... |
@Test public void findCriteriaAttributeByConceptId() { DbCriteriaAttribute criteriaAttributeMin = cbCriteriaAttributeDao.save( DbCriteriaAttribute.builder() .addConceptId(1L) .addConceptName("MIN") .addEstCount("10") .addType("NUM") .addValueAsConceptId(0L) .build()); DbCriteriaAttribute criteriaAttributeMax = cbCriter... | @Override public ResponseEntity<CriteriaAttributeListResponse> findCriteriaAttributeByConceptId( Long cdrVersionId, Long conceptId) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok( new CriteriaAttributeListResponse() .items(cohortBuilderService.findCriteriaAttributeByConceptId(conceptId))); } | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaAttributeListResponse> findCriteriaAttributeByConceptId( Long cdrVersionId, Long conceptId) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok( new CriteriaAttributeListResponse() .items(cohortBu... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaAttributeListResponse> findCriteriaAttributeByConceptId( Long cdrVersionId, Long conceptId) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok( new CriteriaAttributeListResponse() .items(cohortBu... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaAttributeListResponse> findCriteriaAttributeByConceptId( Long cdrVersionId, Long conceptId) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok( new CriteriaAttributeListResponse() .items(cohortBu... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<CriteriaAttributeListResponse> findCriteriaAttributeByConceptId( Long cdrVersionId, Long conceptId) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok( new CriteriaAttributeListResponse() .items(cohortBu... |
@Test public void findParticipantDemographics() { cbCriteriaDao.save( DbCriteria.builder() .addDomainId(DomainType.PERSON.toString()) .addType(CriteriaType.GENDER.toString()) .addName("Male") .addStandard(true) .addConceptId("1") .addParentId(1) .build()); cbCriteriaDao.save( DbCriteria.builder() .addDomainId(DomainTyp... | @Override public ResponseEntity<ParticipantDemographics> findParticipantDemographics(Long cdrVersionId) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok(cohortBuilderService.findParticipantDemographics()); } | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<ParticipantDemographics> findParticipantDemographics(Long cdrVersionId) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok(cohortBuilderService.findParticipantDemographics()); } } | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<ParticipantDemographics> findParticipantDemographics(Long cdrVersionId) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok(cohortBuilderService.findParticipantDemographics()); } @Autowired CohortBuilder... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<ParticipantDemographics> findParticipantDemographics(Long cdrVersionId) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok(cohortBuilderService.findParticipantDemographics()); } @Autowired CohortBuilder... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<ParticipantDemographics> findParticipantDemographics(Long cdrVersionId) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok(cohortBuilderService.findParticipantDemographics()); } @Autowired CohortBuilder... |
@Test public void findSurveyVersionByQuestionConceptId() { jdbcTemplate.execute( "create table cb_survey_version(survey_id integer, concept_id integer, version varchar(50), display_order integer)"); jdbcTemplate.execute( "create table cb_survey_attribute(id integer, question_concept_id integer, answer_concept_id intege... | @Override public ResponseEntity<SurveyVersionListResponse> findSurveyVersionByQuestionConceptId( Long cdrVersionId, Long surveyConceptId, Long questionConceptId) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok( new SurveyVersionListResponse() .items( cohortBuilderService.findSurveyVersionByQue... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<SurveyVersionListResponse> findSurveyVersionByQuestionConceptId( Long cdrVersionId, Long surveyConceptId, Long questionConceptId) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok( new SurveyVersionList... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<SurveyVersionListResponse> findSurveyVersionByQuestionConceptId( Long cdrVersionId, Long surveyConceptId, Long questionConceptId) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok( new SurveyVersionList... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<SurveyVersionListResponse> findSurveyVersionByQuestionConceptId( Long cdrVersionId, Long surveyConceptId, Long questionConceptId) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok( new SurveyVersionList... | CohortBuilderController implements CohortBuilderApiDelegate { @Override public ResponseEntity<SurveyVersionListResponse> findSurveyVersionByQuestionConceptId( Long cdrVersionId, Long surveyConceptId, Long questionConceptId) { cdrVersionService.setCdrVersion(cdrVersionId); return ResponseEntity.ok( new SurveyVersionList... |
@Test public void isApproximate() { SearchParameter inSearchParameter = new SearchParameter(); SearchParameter exSearchParameter = new SearchParameter(); SearchGroupItem inSearchGroupItem = new SearchGroupItem().addSearchParametersItem(inSearchParameter); SearchGroupItem exSearchGroupItem = new SearchGroupItem().addSea... | protected boolean isApproximate(SearchRequest request) { List<SearchGroup> allGroups = ImmutableList.copyOf(Iterables.concat(request.getIncludes(), request.getExcludes())); List<SearchParameter> allParams = allGroups.stream() .flatMap(sg -> sg.getItems().stream()) .flatMap(sgi -> sgi.getSearchParameters().stream()) .co... | CohortBuilderController implements CohortBuilderApiDelegate { protected boolean isApproximate(SearchRequest request) { List<SearchGroup> allGroups = ImmutableList.copyOf(Iterables.concat(request.getIncludes(), request.getExcludes())); List<SearchParameter> allParams = allGroups.stream() .flatMap(sg -> sg.getItems().str... | CohortBuilderController implements CohortBuilderApiDelegate { protected boolean isApproximate(SearchRequest request) { List<SearchGroup> allGroups = ImmutableList.copyOf(Iterables.concat(request.getIncludes(), request.getExcludes())); List<SearchParameter> allParams = allGroups.stream() .flatMap(sg -> sg.getItems().str... | CohortBuilderController implements CohortBuilderApiDelegate { protected boolean isApproximate(SearchRequest request) { List<SearchGroup> allGroups = ImmutableList.copyOf(Iterables.concat(request.getIncludes(), request.getExcludes())); List<SearchParameter> allParams = allGroups.stream() .flatMap(sg -> sg.getItems().str... | CohortBuilderController implements CohortBuilderApiDelegate { protected boolean isApproximate(SearchRequest request) { List<SearchGroup> allGroups = ImmutableList.copyOf(Iterables.concat(request.getIncludes(), request.getExcludes())); List<SearchParameter> allParams = allGroups.stream() .flatMap(sg -> sg.getItems().str... |
@Test public void testGetUserRecentResourceFromRawBucket() { dbUserRecentResource1.setNotebookName("gs: when(mockUserRecentResourceService.findAllResourcesByUser(dbUser.getUserId())) .thenReturn(Collections.singletonList(dbUserRecentResource1)); WorkspaceResourceResponse recentResources = userMetricsController.getUserR... | @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspaceIdList = userRecentResourceList.stream() .map(DbUserRecent... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... |
@Test public void testGetUserRecentResourceWithDuplicatedNameInPath() { dbUserRecentResource1.setNotebookName("gs: when(mockUserRecentResourceService.findAllResourcesByUser(dbUser.getUserId())) .thenReturn(Collections.singletonList(dbUserRecentResource1)); WorkspaceResourceResponse recentResources = userMetricsControll... | @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspaceIdList = userRecentResourceList.stream() .map(DbUserRecent... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... |
@Test public void testCreateAllOfUsBillingProject() throws Exception { workbenchConfig.featureFlags.enableVpcFlowLogs = false; workbenchConfig.featureFlags.enableVpcServicePerimeter = false; workbenchConfig.firecloud.vpcServicePerimeterName = "this will be ignored"; service.createAllOfUsBillingProject("project-name"); ... | @Override public void createAllOfUsBillingProject(String projectName) { if (projectName.contains(WORKSPACE_DELIMITER)) { throw new IllegalArgumentException( String.format( "Attempting to create billing project with name (%s) that contains workspace delimiter (%s)", projectName, WORKSPACE_DELIMITER)); } boolean enableVp... | FireCloudServiceImpl implements FireCloudService { @Override public void createAllOfUsBillingProject(String projectName) { if (projectName.contains(WORKSPACE_DELIMITER)) { throw new IllegalArgumentException( String.format( "Attempting to create billing project with name (%s) that contains workspace delimiter (%s)", pro... | FireCloudServiceImpl implements FireCloudService { @Override public void createAllOfUsBillingProject(String projectName) { if (projectName.contains(WORKSPACE_DELIMITER)) { throw new IllegalArgumentException( String.format( "Attempting to create billing project with name (%s) that contains workspace delimiter (%s)", pro... | FireCloudServiceImpl implements FireCloudService { @Override public void createAllOfUsBillingProject(String projectName) { if (projectName.contains(WORKSPACE_DELIMITER)) { throw new IllegalArgumentException( String.format( "Attempting to create billing project with name (%s) that contains workspace delimiter (%s)", pro... | FireCloudServiceImpl implements FireCloudService { @Override public void createAllOfUsBillingProject(String projectName) { if (projectName.contains(WORKSPACE_DELIMITER)) { throw new IllegalArgumentException( String.format( "Attempting to create billing project with name (%s) that contains workspace delimiter (%s)", pro... |
@Test public void testGetUserRecentResourceWithSpacesInPath() { dbUserRecentResource1.setNotebookName("gs: when(mockUserRecentResourceService.findAllResourcesByUser(dbUser.getUserId())) .thenReturn(Collections.singletonList(dbUserRecentResource1)); WorkspaceResourceResponse recentResources = userMetricsController.getUs... | @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspaceIdList = userRecentResourceList.stream() .map(DbUserRecent... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... |
@Test public void testGetUserRecentResourceInvalidURINotebookPath() { dbUserRecentResource1.setNotebookName("my local notebook directory: notebook.ipynb"); when(mockUserRecentResourceService.findAllResourcesByUser(dbUser.getUserId())) .thenReturn(Collections.singletonList(dbUserRecentResource1)); WorkspaceResourceRespo... | @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspaceIdList = userRecentResourceList.stream() .map(DbUserRecent... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... |
@Test public void testGetUserRecentResourceNotebookPathEndsWithSlash() { dbUserRecentResource1.setNotebookName("gs: when(mockUserRecentResourceService.findAllResourcesByUser(dbUser.getUserId())) .thenReturn(Collections.singletonList(dbUserRecentResource1)); WorkspaceResourceResponse recentResources = userMetricsControl... | @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspaceIdList = userRecentResourceList.stream() .map(DbUserRecent... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... |
@Test public void testGetUserRecentResourceNonexistentNotebook() { dbUserRecentResource1.setNotebookName("gs: dbUserRecentResource2.setCohort(null); dbUserRecentResource2.setNotebookName("gs: when(mockUserRecentResourceService.findAllResourcesByUser(dbUser.getUserId())) .thenReturn(ImmutableList.of(dbUserRecentResource... | @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspaceIdList = userRecentResourceList.stream() .map(DbUserRecent... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... |
@Test public void testGetUserRecentResource() { WorkspaceResourceResponse recentResources = userMetricsController.getUserRecentResources().getBody(); assertNotNull(recentResources); assertEquals(3, recentResources.size()); assertNull(recentResources.get(0).getCohort()); assertEquals(recentResources.get(0).getNotebook()... | @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspaceIdList = userRecentResourceList.stream() .map(DbUserRecent... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResourceResponse> getUserRecentResources() { long userId = userProvider.get().getUserId(); List<DbUserRecentResource> userRecentResourceList = userRecentResourceService.findAllResourcesByUser(userId); List<Long> workspace... |
@Test public void testUpdateRecentResource() { Timestamp now = new Timestamp(fakeClock.instant().toEpochMilli()); DbUserRecentResource mockUserRecentResource = new DbUserRecentResource(); mockUserRecentResource.setCohort(null); mockUserRecentResource.setWorkspaceId(dbWorkspace2.getWorkspaceId()); mockUserRecentResource... | @Override public ResponseEntity<WorkspaceResource> updateRecentResource( String workspaceNamespace, String workspaceId, RecentResourceRequest recentResourceRequest) { long wId = getWorkspaceId(workspaceNamespace, workspaceId); String notebookPath; if (recentResourceRequest.getNotebookName().startsWith("gs: notebookPath... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResource> updateRecentResource( String workspaceNamespace, String workspaceId, RecentResourceRequest recentResourceRequest) { long wId = getWorkspaceId(workspaceNamespace, workspaceId); String notebookPath; if (recentReso... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResource> updateRecentResource( String workspaceNamespace, String workspaceId, RecentResourceRequest recentResourceRequest) { long wId = getWorkspaceId(workspaceNamespace, workspaceId); String notebookPath; if (recentReso... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResource> updateRecentResource( String workspaceNamespace, String workspaceId, RecentResourceRequest recentResourceRequest) { long wId = getWorkspaceId(workspaceNamespace, workspaceId); String notebookPath; if (recentReso... | UserMetricsController implements UserMetricsApiDelegate { @Override public ResponseEntity<WorkspaceResource> updateRecentResource( String workspaceNamespace, String workspaceId, RecentResourceRequest recentResourceRequest) { long wId = getWorkspaceId(workspaceNamespace, workspaceId); String notebookPath; if (recentReso... |
@Test public void testHasValidBlobIdIfNotebookNamePresent_nullNotebookName_passes() { dbUserRecentResource1.setNotebookName(null); assertTrue(userMetricsController.hasValidBlobIdIfNotebookNamePresent(dbUserRecentResource1)); } | @VisibleForTesting public boolean hasValidBlobIdIfNotebookNamePresent(DbUserRecentResource dbUserRecentResource) { return Optional.ofNullable(dbUserRecentResource.getNotebookName()) .map(name -> uriToBlobId(name).isPresent()) .orElse(true); } | UserMetricsController implements UserMetricsApiDelegate { @VisibleForTesting public boolean hasValidBlobIdIfNotebookNamePresent(DbUserRecentResource dbUserRecentResource) { return Optional.ofNullable(dbUserRecentResource.getNotebookName()) .map(name -> uriToBlobId(name).isPresent()) .orElse(true); } } | UserMetricsController implements UserMetricsApiDelegate { @VisibleForTesting public boolean hasValidBlobIdIfNotebookNamePresent(DbUserRecentResource dbUserRecentResource) { return Optional.ofNullable(dbUserRecentResource.getNotebookName()) .map(name -> uriToBlobId(name).isPresent()) .orElse(true); } @Autowired UserMet... | UserMetricsController implements UserMetricsApiDelegate { @VisibleForTesting public boolean hasValidBlobIdIfNotebookNamePresent(DbUserRecentResource dbUserRecentResource) { return Optional.ofNullable(dbUserRecentResource.getNotebookName()) .map(name -> uriToBlobId(name).isPresent()) .orElse(true); } @Autowired UserMet... | UserMetricsController implements UserMetricsApiDelegate { @VisibleForTesting public boolean hasValidBlobIdIfNotebookNamePresent(DbUserRecentResource dbUserRecentResource) { return Optional.ofNullable(dbUserRecentResource.getNotebookName()) .map(name -> uriToBlobId(name).isPresent()) .orElse(true); } @Autowired UserMet... |
@Test public void testHasValidBlobIdIfNotebookNamePresent_validNotebookName_passes() { assertTrue(userMetricsController.hasValidBlobIdIfNotebookNamePresent(dbUserRecentResource1)); } | @VisibleForTesting public boolean hasValidBlobIdIfNotebookNamePresent(DbUserRecentResource dbUserRecentResource) { return Optional.ofNullable(dbUserRecentResource.getNotebookName()) .map(name -> uriToBlobId(name).isPresent()) .orElse(true); } | UserMetricsController implements UserMetricsApiDelegate { @VisibleForTesting public boolean hasValidBlobIdIfNotebookNamePresent(DbUserRecentResource dbUserRecentResource) { return Optional.ofNullable(dbUserRecentResource.getNotebookName()) .map(name -> uriToBlobId(name).isPresent()) .orElse(true); } } | UserMetricsController implements UserMetricsApiDelegate { @VisibleForTesting public boolean hasValidBlobIdIfNotebookNamePresent(DbUserRecentResource dbUserRecentResource) { return Optional.ofNullable(dbUserRecentResource.getNotebookName()) .map(name -> uriToBlobId(name).isPresent()) .orElse(true); } @Autowired UserMet... | UserMetricsController implements UserMetricsApiDelegate { @VisibleForTesting public boolean hasValidBlobIdIfNotebookNamePresent(DbUserRecentResource dbUserRecentResource) { return Optional.ofNullable(dbUserRecentResource.getNotebookName()) .map(name -> uriToBlobId(name).isPresent()) .orElse(true); } @Autowired UserMet... | UserMetricsController implements UserMetricsApiDelegate { @VisibleForTesting public boolean hasValidBlobIdIfNotebookNamePresent(DbUserRecentResource dbUserRecentResource) { return Optional.ofNullable(dbUserRecentResource.getNotebookName()) .map(name -> uriToBlobId(name).isPresent()) .orElse(true); } @Autowired UserMet... |
@Test public void testHasValidBlobIdIfNotebookNamePresent_invalidNotebookName_fails() { dbUserRecentResource1.setNotebookName("invalid-notebook@name"); assertFalse(userMetricsController.hasValidBlobIdIfNotebookNamePresent(dbUserRecentResource1)); } | @VisibleForTesting public boolean hasValidBlobIdIfNotebookNamePresent(DbUserRecentResource dbUserRecentResource) { return Optional.ofNullable(dbUserRecentResource.getNotebookName()) .map(name -> uriToBlobId(name).isPresent()) .orElse(true); } | UserMetricsController implements UserMetricsApiDelegate { @VisibleForTesting public boolean hasValidBlobIdIfNotebookNamePresent(DbUserRecentResource dbUserRecentResource) { return Optional.ofNullable(dbUserRecentResource.getNotebookName()) .map(name -> uriToBlobId(name).isPresent()) .orElse(true); } } | UserMetricsController implements UserMetricsApiDelegate { @VisibleForTesting public boolean hasValidBlobIdIfNotebookNamePresent(DbUserRecentResource dbUserRecentResource) { return Optional.ofNullable(dbUserRecentResource.getNotebookName()) .map(name -> uriToBlobId(name).isPresent()) .orElse(true); } @Autowired UserMet... | UserMetricsController implements UserMetricsApiDelegate { @VisibleForTesting public boolean hasValidBlobIdIfNotebookNamePresent(DbUserRecentResource dbUserRecentResource) { return Optional.ofNullable(dbUserRecentResource.getNotebookName()) .map(name -> uriToBlobId(name).isPresent()) .orElse(true); } @Autowired UserMet... | UserMetricsController implements UserMetricsApiDelegate { @VisibleForTesting public boolean hasValidBlobIdIfNotebookNamePresent(DbUserRecentResource dbUserRecentResource) { return Optional.ofNullable(dbUserRecentResource.getNotebookName()) .map(name -> uriToBlobId(name).isPresent()) .orElse(true); } @Autowired UserMet... |
@Test(expected = BadRequestException.class) public void testCreateAccount_invitationKeyMismatch() { createAccountAndDbUserWithAffiliation(); config.access.requireInvitationKey = true; when(mockCloudStorageService.readInvitationKey()).thenReturn("BLAH"); profileController.createAccount(createAccountRequest); } | @Override public ResponseEntity<Profile> createAccount(CreateAccountRequest request) { if (workbenchConfigProvider.get().captcha.enableCaptcha) { verifyCaptcha(request.getCaptchaVerificationToken()); } if (workbenchConfigProvider.get().access.requireInvitationKey) { verifyInvitationKey(request.getInvitationKey()); } pr... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> createAccount(CreateAccountRequest request) { if (workbenchConfigProvider.get().captcha.enableCaptcha) { verifyCaptcha(request.getCaptchaVerificationToken()); } if (workbenchConfigProvider.get().access.requireInvitationKey) { ver... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> createAccount(CreateAccountRequest request) { if (workbenchConfigProvider.get().captcha.enableCaptcha) { verifyCaptcha(request.getCaptchaVerificationToken()); } if (workbenchConfigProvider.get().access.requireInvitationKey) { ver... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> createAccount(CreateAccountRequest request) { if (workbenchConfigProvider.get().captcha.enableCaptcha) { verifyCaptcha(request.getCaptchaVerificationToken()); } if (workbenchConfigProvider.get().access.requireInvitationKey) { ver... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> createAccount(CreateAccountRequest request) { if (workbenchConfigProvider.get().captcha.enableCaptcha) { verifyCaptcha(request.getCaptchaVerificationToken()); } if (workbenchConfigProvider.get().access.requireInvitationKey) { ver... |
@Test public void testVpcFlowLogsParams() throws Exception { workbenchConfig.featureFlags.enableVpcFlowLogs = true; service.createAllOfUsBillingProject("project-name"); ArgumentCaptor<FirecloudCreateRawlsBillingProjectFullRequest> captor = ArgumentCaptor.forClass(FirecloudCreateRawlsBillingProjectFullRequest.class); ve... | @Override public void createAllOfUsBillingProject(String projectName) { if (projectName.contains(WORKSPACE_DELIMITER)) { throw new IllegalArgumentException( String.format( "Attempting to create billing project with name (%s) that contains workspace delimiter (%s)", projectName, WORKSPACE_DELIMITER)); } boolean enableVp... | FireCloudServiceImpl implements FireCloudService { @Override public void createAllOfUsBillingProject(String projectName) { if (projectName.contains(WORKSPACE_DELIMITER)) { throw new IllegalArgumentException( String.format( "Attempting to create billing project with name (%s) that contains workspace delimiter (%s)", pro... | FireCloudServiceImpl implements FireCloudService { @Override public void createAllOfUsBillingProject(String projectName) { if (projectName.contains(WORKSPACE_DELIMITER)) { throw new IllegalArgumentException( String.format( "Attempting to create billing project with name (%s) that contains workspace delimiter (%s)", pro... | FireCloudServiceImpl implements FireCloudService { @Override public void createAllOfUsBillingProject(String projectName) { if (projectName.contains(WORKSPACE_DELIMITER)) { throw new IllegalArgumentException( String.format( "Attempting to create billing project with name (%s) that contains workspace delimiter (%s)", pro... | FireCloudServiceImpl implements FireCloudService { @Override public void createAllOfUsBillingProject(String projectName) { if (projectName.contains(WORKSPACE_DELIMITER)) { throw new IllegalArgumentException( String.format( "Attempting to create billing project with name (%s) that contains workspace delimiter (%s)", pro... |
@Test(expected = BadRequestException.class) public void testCreateAccount_invalidCaptchaToken() { createAccountAndDbUserWithAffiliation(); createAccountRequest.setCaptchaVerificationToken(WRONG_CAPTCHA_TOKEN); profileController.createAccount(createAccountRequest); } | @Override public ResponseEntity<Profile> createAccount(CreateAccountRequest request) { if (workbenchConfigProvider.get().captcha.enableCaptcha) { verifyCaptcha(request.getCaptchaVerificationToken()); } if (workbenchConfigProvider.get().access.requireInvitationKey) { verifyInvitationKey(request.getInvitationKey()); } pr... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> createAccount(CreateAccountRequest request) { if (workbenchConfigProvider.get().captcha.enableCaptcha) { verifyCaptcha(request.getCaptchaVerificationToken()); } if (workbenchConfigProvider.get().access.requireInvitationKey) { ver... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> createAccount(CreateAccountRequest request) { if (workbenchConfigProvider.get().captcha.enableCaptcha) { verifyCaptcha(request.getCaptchaVerificationToken()); } if (workbenchConfigProvider.get().access.requireInvitationKey) { ver... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> createAccount(CreateAccountRequest request) { if (workbenchConfigProvider.get().captcha.enableCaptcha) { verifyCaptcha(request.getCaptchaVerificationToken()); } if (workbenchConfigProvider.get().access.requireInvitationKey) { ver... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> createAccount(CreateAccountRequest request) { if (workbenchConfigProvider.get().captcha.enableCaptcha) { verifyCaptcha(request.getCaptchaVerificationToken()); } if (workbenchConfigProvider.get().access.requireInvitationKey) { ver... |
@Test public void testCreateAccount_noRequireInvitationKey() { createAccountAndDbUserWithAffiliation(); config.access.requireInvitationKey = false; when(mockCloudStorageService.readInvitationKey()).thenReturn("BLAH"); profileController.createAccount(createAccountRequest); } | @Override public ResponseEntity<Profile> createAccount(CreateAccountRequest request) { if (workbenchConfigProvider.get().captcha.enableCaptcha) { verifyCaptcha(request.getCaptchaVerificationToken()); } if (workbenchConfigProvider.get().access.requireInvitationKey) { verifyInvitationKey(request.getInvitationKey()); } pr... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> createAccount(CreateAccountRequest request) { if (workbenchConfigProvider.get().captcha.enableCaptcha) { verifyCaptcha(request.getCaptchaVerificationToken()); } if (workbenchConfigProvider.get().access.requireInvitationKey) { ver... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> createAccount(CreateAccountRequest request) { if (workbenchConfigProvider.get().captcha.enableCaptcha) { verifyCaptcha(request.getCaptchaVerificationToken()); } if (workbenchConfigProvider.get().access.requireInvitationKey) { ver... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> createAccount(CreateAccountRequest request) { if (workbenchConfigProvider.get().captcha.enableCaptcha) { verifyCaptcha(request.getCaptchaVerificationToken()); } if (workbenchConfigProvider.get().access.requireInvitationKey) { ver... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> createAccount(CreateAccountRequest request) { if (workbenchConfigProvider.get().captcha.enableCaptcha) { verifyCaptcha(request.getCaptchaVerificationToken()); } if (workbenchConfigProvider.get().access.requireInvitationKey) { ver... |
@Test(expected = BadRequestException.class) public void testInvitationKeyVerification_invitationKeyMismatch() { invitationVerificationRequest.setInvitationKey("wrong key"); profileController.invitationKeyVerification(invitationVerificationRequest); } | @Override public ResponseEntity<Void> invitationKeyVerification( InvitationVerificationRequest invitationVerificationRequest) { verifyInvitationKey(invitationVerificationRequest.getInvitationKey()); return ResponseEntity.status(HttpStatus.NO_CONTENT).build(); } | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> invitationKeyVerification( InvitationVerificationRequest invitationVerificationRequest) { verifyInvitationKey(invitationVerificationRequest.getInvitationKey()); return ResponseEntity.status(HttpStatus.NO_CONTENT).build(); } } | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> invitationKeyVerification( InvitationVerificationRequest invitationVerificationRequest) { verifyInvitationKey(invitationVerificationRequest.getInvitationKey()); return ResponseEntity.status(HttpStatus.NO_CONTENT).build(); } @Autowir... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> invitationKeyVerification( InvitationVerificationRequest invitationVerificationRequest) { verifyInvitationKey(invitationVerificationRequest.getInvitationKey()); return ResponseEntity.status(HttpStatus.NO_CONTENT).build(); } @Autowir... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> invitationKeyVerification( InvitationVerificationRequest invitationVerificationRequest) { verifyInvitationKey(invitationVerificationRequest.getInvitationKey()); return ResponseEntity.status(HttpStatus.NO_CONTENT).build(); } @Autowir... |
@Test public void testSubmitDataUseAgreement_success() { createAccountAndDbUserWithAffiliation(); String duaInitials = "NIH"; assertThat(profileController.submitDataUseAgreement(DUA_VERSION, duaInitials).getStatusCode()) .isEqualTo(HttpStatus.OK); List<DbUserDataUseAgreement> dbUserDataUseAgreementList = userDataUseAgr... | @Override public ResponseEntity<Profile> submitDataUseAgreement( Integer dataUseAgreementSignedVersion, String initials) { DbUser user = userService.submitDataUseAgreement( userProvider.get(), dataUseAgreementSignedVersion, initials); return getProfileResponse(saveUserWithConflictHandling(user)); } | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> submitDataUseAgreement( Integer dataUseAgreementSignedVersion, String initials) { DbUser user = userService.submitDataUseAgreement( userProvider.get(), dataUseAgreementSignedVersion, initials); return getProfileResponse(saveUserW... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> submitDataUseAgreement( Integer dataUseAgreementSignedVersion, String initials) { DbUser user = userService.submitDataUseAgreement( userProvider.get(), dataUseAgreementSignedVersion, initials); return getProfileResponse(saveUserW... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> submitDataUseAgreement( Integer dataUseAgreementSignedVersion, String initials) { DbUser user = userService.submitDataUseAgreement( userProvider.get(), dataUseAgreementSignedVersion, initials); return getProfileResponse(saveUserW... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> submitDataUseAgreement( Integer dataUseAgreementSignedVersion, String initials) { DbUser user = userService.submitDataUseAgreement( userProvider.get(), dataUseAgreementSignedVersion, initials); return getProfileResponse(saveUserW... |
@Test(expected = BadRequestException.class) public void testSubmitDataUseAgreement_wrongVersion() { createAccountAndDbUserWithAffiliation(); String duaInitials = "NIH"; profileController.submitDataUseAgreement(DUA_VERSION - 1, duaInitials); } | @Override public ResponseEntity<Profile> submitDataUseAgreement( Integer dataUseAgreementSignedVersion, String initials) { DbUser user = userService.submitDataUseAgreement( userProvider.get(), dataUseAgreementSignedVersion, initials); return getProfileResponse(saveUserWithConflictHandling(user)); } | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> submitDataUseAgreement( Integer dataUseAgreementSignedVersion, String initials) { DbUser user = userService.submitDataUseAgreement( userProvider.get(), dataUseAgreementSignedVersion, initials); return getProfileResponse(saveUserW... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> submitDataUseAgreement( Integer dataUseAgreementSignedVersion, String initials) { DbUser user = userService.submitDataUseAgreement( userProvider.get(), dataUseAgreementSignedVersion, initials); return getProfileResponse(saveUserW... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> submitDataUseAgreement( Integer dataUseAgreementSignedVersion, String initials) { DbUser user = userService.submitDataUseAgreement( userProvider.get(), dataUseAgreementSignedVersion, initials); return getProfileResponse(saveUserW... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> submitDataUseAgreement( Integer dataUseAgreementSignedVersion, String initials) { DbUser user = userService.submitDataUseAgreement( userProvider.get(), dataUseAgreementSignedVersion, initials); return getProfileResponse(saveUserW... |
@Test public void testMe_success() { createAccountAndDbUserWithAffiliation(); Profile profile = profileController.getMe().getBody(); assertProfile( profile, PRIMARY_EMAIL, CONTACT_EMAIL, FAMILY_NAME, GIVEN_NAME, DataAccessLevel.UNREGISTERED, TIMESTAMP, false); verify(mockFireCloudService).registerUser(CONTACT_EMAIL, GI... | @Override public ResponseEntity<Profile> getMe() { DbUser dbUser = initializeUserIfNeeded(); profileAuditor.fireLoginAction(dbUser); return getProfileResponse(dbUser); } | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> getMe() { DbUser dbUser = initializeUserIfNeeded(); profileAuditor.fireLoginAction(dbUser); return getProfileResponse(dbUser); } } | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> getMe() { DbUser dbUser = initializeUserIfNeeded(); profileAuditor.fireLoginAction(dbUser); return getProfileResponse(dbUser); } @Autowired ProfileController(
ActionAuditQueryService actionAuditQueryService,
CaptchaV... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> getMe() { DbUser dbUser = initializeUserIfNeeded(); profileAuditor.fireLoginAction(dbUser); return getProfileResponse(dbUser); } @Autowired ProfileController(
ActionAuditQueryService actionAuditQueryService,
CaptchaV... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> getMe() { DbUser dbUser = initializeUserIfNeeded(); profileAuditor.fireLoginAction(dbUser); return getProfileResponse(dbUser); } @Autowired ProfileController(
ActionAuditQueryService actionAuditQueryService,
CaptchaV... |
@Test public void testMe_userBeforeNotLoggedInSuccess() { createAccountAndDbUserWithAffiliation(); Profile profile = profileController.getMe().getBody(); assertProfile( profile, PRIMARY_EMAIL, CONTACT_EMAIL, FAMILY_NAME, GIVEN_NAME, DataAccessLevel.UNREGISTERED, TIMESTAMP, false); verify(mockFireCloudService).registerU... | @Override public ResponseEntity<Profile> getMe() { DbUser dbUser = initializeUserIfNeeded(); profileAuditor.fireLoginAction(dbUser); return getProfileResponse(dbUser); } | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> getMe() { DbUser dbUser = initializeUserIfNeeded(); profileAuditor.fireLoginAction(dbUser); return getProfileResponse(dbUser); } } | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> getMe() { DbUser dbUser = initializeUserIfNeeded(); profileAuditor.fireLoginAction(dbUser); return getProfileResponse(dbUser); } @Autowired ProfileController(
ActionAuditQueryService actionAuditQueryService,
CaptchaV... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> getMe() { DbUser dbUser = initializeUserIfNeeded(); profileAuditor.fireLoginAction(dbUser); return getProfileResponse(dbUser); } @Autowired ProfileController(
ActionAuditQueryService actionAuditQueryService,
CaptchaV... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> getMe() { DbUser dbUser = initializeUserIfNeeded(); profileAuditor.fireLoginAction(dbUser); return getProfileResponse(dbUser); } @Autowired ProfileController(
ActionAuditQueryService actionAuditQueryService,
CaptchaV... |
@Test(expected = NotFoundException.class) public void updateVerifiedInstitutionalAffiliation_noSuchInstitution() { boolean grantAdminAuthority = true; final VerifiedInstitutionalAffiliation original = createVerifiedInstitutionalAffiliation(); createAccountAndDbUserWithAffiliation(original, grantAdminAuthority); final V... | @AuthorityRequired(Authority.ACCESS_CONTROL_ADMIN) @Override @Deprecated public ResponseEntity<EmptyResponse> updateVerifiedInstitutionalAffiliation( Long userId, VerifiedInstitutionalAffiliation verifiedAffiliation) { DbUser dbUser = userDao.findUserByUserId(userId); Profile updatedProfile = profileService.getProfile(... | ProfileController implements ProfileApiDelegate { @AuthorityRequired(Authority.ACCESS_CONTROL_ADMIN) @Override @Deprecated public ResponseEntity<EmptyResponse> updateVerifiedInstitutionalAffiliation( Long userId, VerifiedInstitutionalAffiliation verifiedAffiliation) { DbUser dbUser = userDao.findUserByUserId(userId); P... | ProfileController implements ProfileApiDelegate { @AuthorityRequired(Authority.ACCESS_CONTROL_ADMIN) @Override @Deprecated public ResponseEntity<EmptyResponse> updateVerifiedInstitutionalAffiliation( Long userId, VerifiedInstitutionalAffiliation verifiedAffiliation) { DbUser dbUser = userDao.findUserByUserId(userId); P... | ProfileController implements ProfileApiDelegate { @AuthorityRequired(Authority.ACCESS_CONTROL_ADMIN) @Override @Deprecated public ResponseEntity<EmptyResponse> updateVerifiedInstitutionalAffiliation( Long userId, VerifiedInstitutionalAffiliation verifiedAffiliation) { DbUser dbUser = userDao.findUserByUserId(userId); P... | ProfileController implements ProfileApiDelegate { @AuthorityRequired(Authority.ACCESS_CONTROL_ADMIN) @Override @Deprecated public ResponseEntity<EmptyResponse> updateVerifiedInstitutionalAffiliation( Long userId, VerifiedInstitutionalAffiliation verifiedAffiliation) { DbUser dbUser = userDao.findUserByUserId(userId); P... |
@Test public void updateVerifiedInstitutionalAffiliation_update() { boolean grantAdminAuthority = true; VerifiedInstitutionalAffiliation verifiedInstitutionalAffiliation = createVerifiedInstitutionalAffiliation(); createAccountAndDbUserWithAffiliation(verifiedInstitutionalAffiliation, grantAdminAuthority); verifiedInst... | @AuthorityRequired(Authority.ACCESS_CONTROL_ADMIN) @Override @Deprecated public ResponseEntity<EmptyResponse> updateVerifiedInstitutionalAffiliation( Long userId, VerifiedInstitutionalAffiliation verifiedAffiliation) { DbUser dbUser = userDao.findUserByUserId(userId); Profile updatedProfile = profileService.getProfile(... | ProfileController implements ProfileApiDelegate { @AuthorityRequired(Authority.ACCESS_CONTROL_ADMIN) @Override @Deprecated public ResponseEntity<EmptyResponse> updateVerifiedInstitutionalAffiliation( Long userId, VerifiedInstitutionalAffiliation verifiedAffiliation) { DbUser dbUser = userDao.findUserByUserId(userId); P... | ProfileController implements ProfileApiDelegate { @AuthorityRequired(Authority.ACCESS_CONTROL_ADMIN) @Override @Deprecated public ResponseEntity<EmptyResponse> updateVerifiedInstitutionalAffiliation( Long userId, VerifiedInstitutionalAffiliation verifiedAffiliation) { DbUser dbUser = userDao.findUserByUserId(userId); P... | ProfileController implements ProfileApiDelegate { @AuthorityRequired(Authority.ACCESS_CONTROL_ADMIN) @Override @Deprecated public ResponseEntity<EmptyResponse> updateVerifiedInstitutionalAffiliation( Long userId, VerifiedInstitutionalAffiliation verifiedAffiliation) { DbUser dbUser = userDao.findUserByUserId(userId); P... | ProfileController implements ProfileApiDelegate { @AuthorityRequired(Authority.ACCESS_CONTROL_ADMIN) @Override @Deprecated public ResponseEntity<EmptyResponse> updateVerifiedInstitutionalAffiliation( Long userId, VerifiedInstitutionalAffiliation verifiedAffiliation) { DbUser dbUser = userDao.findUserByUserId(userId); P... |
@Test(expected = BadRequestException.class) public void updateVerifiedInstitutionalAffiliation_removeForbidden() { boolean grantAdminAuthority = true; final VerifiedInstitutionalAffiliation original = createVerifiedInstitutionalAffiliation(); createAccountAndDbUserWithAffiliation(original, grantAdminAuthority); profile... | @AuthorityRequired(Authority.ACCESS_CONTROL_ADMIN) @Override @Deprecated public ResponseEntity<EmptyResponse> updateVerifiedInstitutionalAffiliation( Long userId, VerifiedInstitutionalAffiliation verifiedAffiliation) { DbUser dbUser = userDao.findUserByUserId(userId); Profile updatedProfile = profileService.getProfile(... | ProfileController implements ProfileApiDelegate { @AuthorityRequired(Authority.ACCESS_CONTROL_ADMIN) @Override @Deprecated public ResponseEntity<EmptyResponse> updateVerifiedInstitutionalAffiliation( Long userId, VerifiedInstitutionalAffiliation verifiedAffiliation) { DbUser dbUser = userDao.findUserByUserId(userId); P... | ProfileController implements ProfileApiDelegate { @AuthorityRequired(Authority.ACCESS_CONTROL_ADMIN) @Override @Deprecated public ResponseEntity<EmptyResponse> updateVerifiedInstitutionalAffiliation( Long userId, VerifiedInstitutionalAffiliation verifiedAffiliation) { DbUser dbUser = userDao.findUserByUserId(userId); P... | ProfileController implements ProfileApiDelegate { @AuthorityRequired(Authority.ACCESS_CONTROL_ADMIN) @Override @Deprecated public ResponseEntity<EmptyResponse> updateVerifiedInstitutionalAffiliation( Long userId, VerifiedInstitutionalAffiliation verifiedAffiliation) { DbUser dbUser = userDao.findUserByUserId(userId); P... | ProfileController implements ProfileApiDelegate { @AuthorityRequired(Authority.ACCESS_CONTROL_ADMIN) @Override @Deprecated public ResponseEntity<EmptyResponse> updateVerifiedInstitutionalAffiliation( Long userId, VerifiedInstitutionalAffiliation verifiedAffiliation) { DbUser dbUser = userDao.findUserByUserId(userId); P... |
@Test public void testVpcServicePerimeterParams() throws Exception { String servicePerimeter = "a-cloud-with-a-fence-around-it"; workbenchConfig.featureFlags.enableVpcServicePerimeter = true; workbenchConfig.firecloud.vpcServicePerimeterName = servicePerimeter; service.createAllOfUsBillingProject("project-name"); Argum... | @Override public void createAllOfUsBillingProject(String projectName) { if (projectName.contains(WORKSPACE_DELIMITER)) { throw new IllegalArgumentException( String.format( "Attempting to create billing project with name (%s) that contains workspace delimiter (%s)", projectName, WORKSPACE_DELIMITER)); } boolean enableVp... | FireCloudServiceImpl implements FireCloudService { @Override public void createAllOfUsBillingProject(String projectName) { if (projectName.contains(WORKSPACE_DELIMITER)) { throw new IllegalArgumentException( String.format( "Attempting to create billing project with name (%s) that contains workspace delimiter (%s)", pro... | FireCloudServiceImpl implements FireCloudService { @Override public void createAllOfUsBillingProject(String projectName) { if (projectName.contains(WORKSPACE_DELIMITER)) { throw new IllegalArgumentException( String.format( "Attempting to create billing project with name (%s) that contains workspace delimiter (%s)", pro... | FireCloudServiceImpl implements FireCloudService { @Override public void createAllOfUsBillingProject(String projectName) { if (projectName.contains(WORKSPACE_DELIMITER)) { throw new IllegalArgumentException( String.format( "Attempting to create billing project with name (%s) that contains workspace delimiter (%s)", pro... | FireCloudServiceImpl implements FireCloudService { @Override public void createAllOfUsBillingProject(String projectName) { if (projectName.contains(WORKSPACE_DELIMITER)) { throw new IllegalArgumentException( String.format( "Attempting to create billing project with name (%s) that contains workspace delimiter (%s)", pro... |
@Test public void updateContactEmail_forbidden() { createAccountAndDbUserWithAffiliation(); dbUser.setFirstSignInTime(TIMESTAMP); String originalEmail = dbUser.getContactEmail(); ResponseEntity<Void> response = profileController.updateContactEmail( new UpdateContactEmailRequest() .contactEmail("newContactEmail@whatever... | @Override public ResponseEntity<Void> updateContactEmail( UpdateContactEmailRequest updateContactEmailRequest) { String username = updateContactEmailRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(username); DbUser user = userService.getByUsernameO... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> updateContactEmail( UpdateContactEmailRequest updateContactEmailRequest) { String username = updateContactEmailRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(u... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> updateContactEmail( UpdateContactEmailRequest updateContactEmailRequest) { String username = updateContactEmailRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(u... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> updateContactEmail( UpdateContactEmailRequest updateContactEmailRequest) { String username = updateContactEmailRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(u... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> updateContactEmail( UpdateContactEmailRequest updateContactEmailRequest) { String username = updateContactEmailRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(u... |
@Test public void updateContactEmail_badRequest() { createAccountAndDbUserWithAffiliation(); when(mockDirectoryService.resetUserPassword(anyString())).thenReturn(googleUser); dbUser.setFirstSignInTime(null); String originalEmail = dbUser.getContactEmail(); ResponseEntity<Void> response = profileController.updateContact... | @Override public ResponseEntity<Void> updateContactEmail( UpdateContactEmailRequest updateContactEmailRequest) { String username = updateContactEmailRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(username); DbUser user = userService.getByUsernameO... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> updateContactEmail( UpdateContactEmailRequest updateContactEmailRequest) { String username = updateContactEmailRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(u... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> updateContactEmail( UpdateContactEmailRequest updateContactEmailRequest) { String username = updateContactEmailRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(u... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> updateContactEmail( UpdateContactEmailRequest updateContactEmailRequest) { String username = updateContactEmailRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(u... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> updateContactEmail( UpdateContactEmailRequest updateContactEmailRequest) { String username = updateContactEmailRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(u... |
@Test public void updateContactEmail_OK() { createAccountAndDbUserWithAffiliation(); dbUser.setFirstSignInTime(null); when(mockDirectoryService.resetUserPassword(anyString())).thenReturn(googleUser); ResponseEntity<Void> response = profileController.updateContactEmail( new UpdateContactEmailRequest() .contactEmail("new... | @Override public ResponseEntity<Void> updateContactEmail( UpdateContactEmailRequest updateContactEmailRequest) { String username = updateContactEmailRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(username); DbUser user = userService.getByUsernameO... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> updateContactEmail( UpdateContactEmailRequest updateContactEmailRequest) { String username = updateContactEmailRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(u... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> updateContactEmail( UpdateContactEmailRequest updateContactEmailRequest) { String username = updateContactEmailRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(u... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> updateContactEmail( UpdateContactEmailRequest updateContactEmailRequest) { String username = updateContactEmailRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(u... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> updateContactEmail( UpdateContactEmailRequest updateContactEmailRequest) { String username = updateContactEmailRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(u... |
@Test public void resendWelcomeEmail_messagingException() throws MessagingException { createAccountAndDbUserWithAffiliation(); dbUser.setFirstSignInTime(null); when(mockDirectoryService.resetUserPassword(anyString())).thenReturn(googleUser); doThrow(new MessagingException("exception")) .when(mockMailService) .sendWelco... | @Override public ResponseEntity<Void> resendWelcomeEmail(ResendWelcomeEmailRequest resendRequest) { String username = resendRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(username); DbUser user = userService.getByUsernameOrThrow(username); checkUs... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> resendWelcomeEmail(ResendWelcomeEmailRequest resendRequest) { String username = resendRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(username); DbUser user = u... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> resendWelcomeEmail(ResendWelcomeEmailRequest resendRequest) { String username = resendRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(username); DbUser user = u... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> resendWelcomeEmail(ResendWelcomeEmailRequest resendRequest) { String username = resendRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(username); DbUser user = u... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> resendWelcomeEmail(ResendWelcomeEmailRequest resendRequest) { String username = resendRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(username); DbUser user = u... |
@Test public void resendWelcomeEmail_OK() throws MessagingException { createAccountAndDbUserWithAffiliation(); when(mockDirectoryService.resetUserPassword(anyString())).thenReturn(googleUser); doNothing().when(mockMailService).sendWelcomeEmail(any(), any(), any()); ResponseEntity<Void> response = profileController.rese... | @Override public ResponseEntity<Void> resendWelcomeEmail(ResendWelcomeEmailRequest resendRequest) { String username = resendRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(username); DbUser user = userService.getByUsernameOrThrow(username); checkUs... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> resendWelcomeEmail(ResendWelcomeEmailRequest resendRequest) { String username = resendRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(username); DbUser user = u... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> resendWelcomeEmail(ResendWelcomeEmailRequest resendRequest) { String username = resendRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(username); DbUser user = u... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> resendWelcomeEmail(ResendWelcomeEmailRequest resendRequest) { String username = resendRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(username); DbUser user = u... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> resendWelcomeEmail(ResendWelcomeEmailRequest resendRequest) { String username = resendRequest.getUsername().toLowerCase(); com.google.api.services.directory.model.User googleUser = directoryService.getUser(username); DbUser user = u... |
@Test public void testUpdateNihToken() { config.featureFlags.useNewShibbolethService = false; NihToken nihToken = new NihToken().jwt("test"); FirecloudJWTWrapper firecloudJwt = new FirecloudJWTWrapper().jwt("test"); createAccountAndDbUserWithAffiliation(); profileController.updateNihToken(nihToken); verify(mockFireClou... | @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.updateShibbolethToken(token.getJwt()); } else { fire... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... |
@Test(expected = ServerErrorException.class) public void testUpdateNihToken_serverError() { config.featureFlags.useNewShibbolethService = false; doThrow(new ServerErrorException()).when(mockFireCloudService).postNihCallback(any()); profileController.updateNihToken(new NihToken().jwt("test")); } | @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.updateShibbolethToken(token.getJwt()); } else { fire... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... |
@Test public void testUpdateNihToken_newShibbolethService() { config.featureFlags.useNewShibbolethService = true; NihToken nihToken = new NihToken().jwt("test"); String jwt = "test"; createAccountAndDbUserWithAffiliation(); profileController.updateNihToken(nihToken); verify(shibbolethService).updateShibbolethToken(eq(j... | @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.updateShibbolethToken(token.getJwt()); } else { fire... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... |
@Test(expected = BadRequestException.class) public void testUpdateNihToken_badRequest_1() { profileController.updateNihToken(null); } | @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.updateShibbolethToken(token.getJwt()); } else { fire... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... |
@Test(expected = BadRequestException.class) public void testUpdateNihToken_badRequest_noJwt() { profileController.updateNihToken(new NihToken()); } | @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.updateShibbolethToken(token.getJwt()); } else { fire... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> updateNihToken(NihToken token) { if (token == null || token.getJwt() == null) { throw new BadRequestException("Token is required."); } if (workbenchConfigProvider.get().featureFlags.useNewShibbolethService) { shibbolethService.up... |
@Test public void canBufferMultipleProjectsPerTask() { workbenchConfig.billing.bufferRefillProjectsPerTask = 2; billingProjectBufferService.bufferBillingProjects(); verify(mockFireCloudService, times(2)).createAllOfUsBillingProject(anyString()); } | public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } } | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } @Autowired BillingProjectBufferService(
Billing... | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } @Autowired BillingProjectBufferService(
Billing... | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } @Autowired BillingProjectBufferService(
Billing... |
@Test public void testSyncEraCommons() { FirecloudNihStatus nihStatus = new FirecloudNihStatus(); String linkedUsername = "linked"; nihStatus.setLinkedNihUsername(linkedUsername); nihStatus.setLinkExpireTime(TIMESTAMP.getTime()); when(mockFireCloudService.getNihStatus()).thenReturn(nihStatus); createAccountAndDbUserWit... | @Override public ResponseEntity<Profile> syncEraCommonsStatus() { userService.syncEraCommonsStatus(); return getProfileResponse(userProvider.get()); } | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> syncEraCommonsStatus() { userService.syncEraCommonsStatus(); return getProfileResponse(userProvider.get()); } } | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> syncEraCommonsStatus() { userService.syncEraCommonsStatus(); return getProfileResponse(userProvider.get()); } @Autowired ProfileController(
ActionAuditQueryService actionAuditQueryService,
CaptchaVerificationService ... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> syncEraCommonsStatus() { userService.syncEraCommonsStatus(); return getProfileResponse(userProvider.get()); } @Autowired ProfileController(
ActionAuditQueryService actionAuditQueryService,
CaptchaVerificationService ... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Profile> syncEraCommonsStatus() { userService.syncEraCommonsStatus(); return getProfileResponse(userProvider.get()); } @Autowired ProfileController(
ActionAuditQueryService actionAuditQueryService,
CaptchaVerificationService ... |
@Test public void testDeleteProfile() { createAccountAndDbUserWithAffiliation(); profileController.deleteProfile(); verify(mockProfileAuditor).fireDeleteAction(dbUser.getUserId(), dbUser.getUsername()); } | @Override public ResponseEntity<Void> deleteProfile() { if (!workbenchConfigProvider.get().featureFlags.unsafeAllowDeleteUser) { throw new ForbiddenException("Self account deletion is disallowed in this environment."); } DbUser user = userProvider.get(); log.log(Level.WARNING, "Deleting profile: user email: " + user.ge... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> deleteProfile() { if (!workbenchConfigProvider.get().featureFlags.unsafeAllowDeleteUser) { throw new ForbiddenException("Self account deletion is disallowed in this environment."); } DbUser user = userProvider.get(); log.log(Level.W... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> deleteProfile() { if (!workbenchConfigProvider.get().featureFlags.unsafeAllowDeleteUser) { throw new ForbiddenException("Self account deletion is disallowed in this environment."); } DbUser user = userProvider.get(); log.log(Level.W... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> deleteProfile() { if (!workbenchConfigProvider.get().featureFlags.unsafeAllowDeleteUser) { throw new ForbiddenException("Self account deletion is disallowed in this environment."); } DbUser user = userProvider.get(); log.log(Level.W... | ProfileController implements ProfileApiDelegate { @Override public ResponseEntity<Void> deleteProfile() { if (!workbenchConfigProvider.get().featureFlags.unsafeAllowDeleteUser) { throw new ForbiddenException("Self account deletion is disallowed in this environment."); } DbUser user = userProvider.get(); log.log(Level.W... |
@Test public void testBypassAccessModule() { Profile profile = createAccountAndDbUserWithAffiliation(); profileController.bypassAccessRequirement( profile.getUserId(), new AccessBypassRequest().isBypassed(true).moduleName(AccessModule.DATA_USE_AGREEMENT)); DbUser dbUser = userDao.findUserByUsername(PRIMARY_EMAIL); asse... | @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<EmptyResponse> bypassAccessRequirement( Long userId, AccessBypassRequest request) { userService.updateBypassTime(userId, request); return ResponseEntity.ok(new EmptyResponse()); } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<EmptyResponse> bypassAccessRequirement( Long userId, AccessBypassRequest request) { userService.updateBypassTime(userId, request); return ResponseEntity.ok(new EmptyResponse()); } } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<EmptyResponse> bypassAccessRequirement( Long userId, AccessBypassRequest request) { userService.updateBypassTime(userId, request); return ResponseEntity.ok(new EmptyResponse()); } @Auto... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<EmptyResponse> bypassAccessRequirement( Long userId, AccessBypassRequest request) { userService.updateBypassTime(userId, request); return ResponseEntity.ok(new EmptyResponse()); } @Auto... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<EmptyResponse> bypassAccessRequirement( Long userId, AccessBypassRequest request) { userService.updateBypassTime(userId, request); return ResponseEntity.ok(new EmptyResponse()); } @Auto... |
@Test(expected = NotFoundException.class) public void test_updateAccountProperties_null_user() { profileService.updateAccountProperties(new AccountPropertyUpdate()); } | @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... |
@Test(expected = NotFoundException.class) public void test_updateAccountProperties_user_not_found() { final AccountPropertyUpdate request = new AccountPropertyUpdate().username("not found"); profileService.updateAccountProperties(request); } | @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... |
@Test public void test_updateAccountProperties_no_change() { final Profile original = createAccountAndDbUserWithAffiliation(); final AccountPropertyUpdate request = new AccountPropertyUpdate().username(PRIMARY_EMAIL); final Profile retrieved = profileService.updateAccountProperties(request); retrieved.setDemographicSur... | @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... |
@Test public void test_updateAccountProperties_contactEmail() { boolean grantAdminAuthority = true; final String newContactEmail = "eric.lander@broadinstitute.org"; final Institution broadPlus = new Institution() .shortName("Broad") .displayName("The Broad Institute") .emailAddresses(ImmutableList.of(CONTACT_EMAIL, new... | @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... |
@Test(expected = BadRequestException.class) public void test_updateAccountProperties_contactEmail_user() { boolean grantAdminAuthority = false; final String newContactEmail = "eric.lander@broadinstitute.org"; final Institution broadPlus = new Institution() .shortName("Broad") .displayName("The Broad Institute") .emailA... | @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... |
@Test(expected = BadRequestException.class) public void test_updateAccountProperties_contactEmail_no_match() { boolean grantAdminAuthority = true; createAccountAndDbUserWithAffiliation(grantAdminAuthority); final String newContactEmail = "eric.lander@broadinstitute.org"; final AccountPropertyUpdate request = new Accoun... | @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... |
@Test public void test_updateAccountProperties_newAffiliation() { boolean grantAdminAuthority = true; final VerifiedInstitutionalAffiliation expectedOriginalAffiliation = new VerifiedInstitutionalAffiliation() .institutionShortName("Broad") .institutionDisplayName("The Broad Institute") .institutionalRoleEnum(Instituti... | @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... |
@Test public void fillBuffer() { billingProjectBufferService.bufferBillingProjects(); ArgumentCaptor<String> captor = ArgumentCaptor.forClass(String.class); verify(mockFireCloudService).createAllOfUsBillingProject(captor.capture()); String billingProjectName = captor.getValue(); assertThat(billingProjectName).startsWit... | public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } } | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } @Autowired BillingProjectBufferService(
Billing... | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } @Autowired BillingProjectBufferService(
Billing... | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } @Autowired BillingProjectBufferService(
Billing... |
@Test(expected = BadRequestException.class) public void test_updateAccountProperties_newAffiliation_no_match() { boolean grantAdminAuthority = true; createAccountAndDbUserWithAffiliation(grantAdminAuthority); final Institution massGeneral = new Institution() .shortName("MGH123") .displayName("Massachusetts General Hosp... | @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... |
@Test public void test_updateAccountProperties_contactEmail_newAffiliation_self_match() { boolean grantAdminAuthority = true; final VerifiedInstitutionalAffiliation expectedOriginalAffiliation = new VerifiedInstitutionalAffiliation() .institutionShortName("Broad") .institutionDisplayName("The Broad Institute") .institu... | @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... |
@Test(expected = BadRequestException.class) public void test_updateAccountProperties_contactEmail_newAffiliation_no_match() { boolean grantAdminAuthority = true; final VerifiedInstitutionalAffiliation expectedOriginalAffiliation = new VerifiedInstitutionalAffiliation() .institutionShortName("Broad") .institutionDisplay... | @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... |
@Test public void test_updateAccountProperties_no_bypass_requests() { final Profile original = createAccountAndDbUserWithAffiliation(); final AccountPropertyUpdate request = new AccountPropertyUpdate() .username(PRIMARY_EMAIL) .accessBypassRequests(Collections.emptyList()); final Profile retrieved = profileService.upda... | @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
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@Test public void test_updateAccountProperties_bypass_requests() { final Profile original = createAccountAndDbUserWithAffiliation(); assertThat(original.getDataUseAgreementBypassTime()).isNull(); assertThat(original.getComplianceTrainingBypassTime()).isNull(); assertThat(original.getBetaAccessBypassTime()).isNull(); as... | @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... |
@Test public void test_updateAccountProperties_free_tier_quota() { createAccountAndDbUserWithAffiliation(); final Double originalQuota = dbUser.getFreeTierCreditsLimitDollarsOverride(); final Double newQuota = 123.4; final AccountPropertyUpdate request = new AccountPropertyUpdate().username(PRIMARY_EMAIL).freeCreditsLi... | @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... |
@Test public void test_updateAccountProperties_free_tier_quota_no_change() { final Profile original = createAccountAndDbUserWithAffiliation(); final AccountPropertyUpdate request = new AccountPropertyUpdate() .username(PRIMARY_EMAIL) .freeCreditsLimit(original.getFreeTierDollarQuota()); profileService.updateAccountProp... | @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... |
@Test public void test_updateAccountProperties_free_tier_quota_no_override() { config.billing.defaultFreeCreditsDollarLimit = 123.45; final Profile original = createAccountAndDbUserWithAffiliation(); assertThat(original.getFreeTierDollarQuota()).isWithin(0.01).of(123.45); config.billing.defaultFreeCreditsDollarLimit = ... | @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } } | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... | ProfileController implements ProfileApiDelegate { @Override @AuthorityRequired({Authority.ACCESS_CONTROL_ADMIN}) public ResponseEntity<Profile> updateAccountProperties(AccountPropertyUpdate request) { return ResponseEntity.ok(profileService.updateAccountProperties(request)); } @Autowired ProfileController(
Actio... |
@Test public void testLogsApiKeyFailure() { assertThrows( UnauthorizedException.class, () -> sumoLogicController.logEgressEvent("bad-key", request)); verify(mockEgressEventAuditor).fireBadApiKey("bad-key", request); } | @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEvent[].class); Arrays.stream(events).forEach(egressEvent... | SumoLogicController implements SumoLogicApiDelegate { @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEve... | SumoLogicController implements SumoLogicApiDelegate { @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEve... | SumoLogicController implements SumoLogicApiDelegate { @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEve... | SumoLogicController implements SumoLogicApiDelegate { @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEve... |
@Test public void testLogsRequestParsingFailure() { request.setEventsJsonArray("bad-json"); assertThrows( BadRequestException.class, () -> sumoLogicController.logEgressEvent(API_KEY, request)); verify(mockEgressEventAuditor).fireFailedToParseEgressEventRequest(request); } | @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEvent[].class); Arrays.stream(events).forEach(egressEvent... | SumoLogicController implements SumoLogicApiDelegate { @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEve... | SumoLogicController implements SumoLogicApiDelegate { @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEve... | SumoLogicController implements SumoLogicApiDelegate { @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEve... | SumoLogicController implements SumoLogicApiDelegate { @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEve... |
@Test public void fillBuffer_failedCreateRequest() { long expectedCount = billingProjectBufferEntryDao.count() + 1; doThrow(RuntimeException.class) .when(mockFireCloudService) .createAllOfUsBillingProject(anyString()); try { billingProjectBufferService.bufferBillingProjects(); } catch (Exception e) { } assertThat(billi... | public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } } | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } @Autowired BillingProjectBufferService(
Billing... | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } @Autowired BillingProjectBufferService(
Billing... | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } @Autowired BillingProjectBufferService(
Billing... |
@Test public void testLogsSingleEvent() { sumoLogicController.logEgressEvent(API_KEY, request); verify(mockEgressEventService).handleEvent(event); } | @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEvent[].class); Arrays.stream(events).forEach(egressEvent... | SumoLogicController implements SumoLogicApiDelegate { @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEve... | SumoLogicController implements SumoLogicApiDelegate { @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEve... | SumoLogicController implements SumoLogicApiDelegate { @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEve... | SumoLogicController implements SumoLogicApiDelegate { @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEve... |
@Test public void testLogsMultipleEvents() throws JsonProcessingException { EgressEvent event2 = new EgressEvent(); request.setEventsJsonArray(objectMapper.writeValueAsString(Arrays.asList(event, event2))); sumoLogicController.logEgressEvent(API_KEY, request); verify(mockEgressEventService, times(2)).handleEvent(any())... | @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEvent[].class); Arrays.stream(events).forEach(egressEvent... | SumoLogicController implements SumoLogicApiDelegate { @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEve... | SumoLogicController implements SumoLogicApiDelegate { @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEve... | SumoLogicController implements SumoLogicApiDelegate { @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEve... | SumoLogicController implements SumoLogicApiDelegate { @Override public ResponseEntity<Void> logEgressEvent(String X_API_KEY, EgressEventRequest request) { authorizeRequest(X_API_KEY, request); try { ObjectMapper mapper = new ObjectMapper(); EgressEvent[] events = mapper.readValue(request.getEventsJsonArray(), EgressEve... |
@Test public void testGetCohortsInWorkspace() throws Exception { Cohort c1 = createDefaultCohort(); c1.setName("c1"); c1 = cohortsController.createCohort(workspace.getNamespace(), workspace.getId(), c1).getBody(); Cohort c2 = createDefaultCohort(); c2.setName("c2"); c2 = cohortsController.createCohort(workspace.getName... | @Override public ResponseEntity<CohortListResponse> getCohortsInWorkspace( String workspaceNamespace, String workspaceId) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.READER); DbWorkspace workspace = workspaceService.getRequiredWithCohorts(... | CohortsController implements CohortsApiDelegate { @Override public ResponseEntity<CohortListResponse> getCohortsInWorkspace( String workspaceNamespace, String workspaceId) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.READER); DbWorkspace wo... | CohortsController implements CohortsApiDelegate { @Override public ResponseEntity<CohortListResponse> getCohortsInWorkspace( String workspaceNamespace, String workspaceId) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.READER); DbWorkspace wo... | CohortsController implements CohortsApiDelegate { @Override public ResponseEntity<CohortListResponse> getCohortsInWorkspace( String workspaceNamespace, String workspaceId) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.READER); DbWorkspace wo... | CohortsController implements CohortsApiDelegate { @Override public ResponseEntity<CohortListResponse> getCohortsInWorkspace( String workspaceNamespace, String workspaceId) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.READER); DbWorkspace wo... |
@Test(expected = ServerErrorException.class) public void testCreateCohortBadCriteria() { Cohort cohort = createDefaultCohort(); cohort.setCriteria(badCohortCriteria); cohortsController.createCohort(workspace.getNamespace(), workspace.getId(), cohort).getBody(); } | @Override public ResponseEntity<Cohort> createCohort( String workspaceNamespace, String workspaceId, Cohort cohort) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.WRITER); DbWorkspace workspace = workspaceService.getRequired(workspaceNamespac... | CohortsController implements CohortsApiDelegate { @Override public ResponseEntity<Cohort> createCohort( String workspaceNamespace, String workspaceId, Cohort cohort) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.WRITER); DbWorkspace workspac... | CohortsController implements CohortsApiDelegate { @Override public ResponseEntity<Cohort> createCohort( String workspaceNamespace, String workspaceId, Cohort cohort) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.WRITER); DbWorkspace workspac... | CohortsController implements CohortsApiDelegate { @Override public ResponseEntity<Cohort> createCohort( String workspaceNamespace, String workspaceId, Cohort cohort) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.WRITER); DbWorkspace workspac... | CohortsController implements CohortsApiDelegate { @Override public ResponseEntity<Cohort> createCohort( String workspaceNamespace, String workspaceId, Cohort cohort) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.WRITER); DbWorkspace workspac... |
@Test public void testUpdateCohort() throws Exception { Cohort cohort = createDefaultCohort(); cohort = cohortsController .createCohort(workspace.getNamespace(), workspace.getId(), cohort) .getBody(); cohort.setName("updated-name"); Cohort updated = cohortsController .updateCohort(workspace.getNamespace(), workspace.ge... | @Override public ResponseEntity<Cohort> updateCohort( String workspaceNamespace, String workspaceId, Long cohortId, Cohort cohort) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.WRITER); DbCohort dbCohort = getDbCohort(workspaceNamespace, wor... | CohortsController implements CohortsApiDelegate { @Override public ResponseEntity<Cohort> updateCohort( String workspaceNamespace, String workspaceId, Long cohortId, Cohort cohort) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.WRITER); DbCoh... | CohortsController implements CohortsApiDelegate { @Override public ResponseEntity<Cohort> updateCohort( String workspaceNamespace, String workspaceId, Long cohortId, Cohort cohort) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.WRITER); DbCoh... | CohortsController implements CohortsApiDelegate { @Override public ResponseEntity<Cohort> updateCohort( String workspaceNamespace, String workspaceId, Long cohortId, Cohort cohort) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.WRITER); DbCoh... | CohortsController implements CohortsApiDelegate { @Override public ResponseEntity<Cohort> updateCohort( String workspaceNamespace, String workspaceId, Long cohortId, Cohort cohort) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.WRITER); DbCoh... |
@Test public void testDuplicateCohort() { Cohort originalCohort = createDefaultCohort(); originalCohort = cohortsController .createCohort(workspace.getNamespace(), workspace.getId(), originalCohort) .getBody(); DuplicateCohortRequest params = new DuplicateCohortRequest(); params.setNewName("New Cohort Name"); params.se... | @Override public ResponseEntity<Cohort> duplicateCohort( String workspaceNamespace, String workspaceId, DuplicateCohortRequest params) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.WRITER); DbWorkspace workspace = workspaceService.getRequire... | CohortsController implements CohortsApiDelegate { @Override public ResponseEntity<Cohort> duplicateCohort( String workspaceNamespace, String workspaceId, DuplicateCohortRequest params) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.WRITER); D... | CohortsController implements CohortsApiDelegate { @Override public ResponseEntity<Cohort> duplicateCohort( String workspaceNamespace, String workspaceId, DuplicateCohortRequest params) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.WRITER); D... | CohortsController implements CohortsApiDelegate { @Override public ResponseEntity<Cohort> duplicateCohort( String workspaceNamespace, String workspaceId, DuplicateCohortRequest params) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.WRITER); D... | CohortsController implements CohortsApiDelegate { @Override public ResponseEntity<Cohort> duplicateCohort( String workspaceNamespace, String workspaceId, DuplicateCohortRequest params) { workspaceService.enforceWorkspaceAccessLevelAndRegisteredAuthDomain( workspaceNamespace, workspaceId, WorkspaceAccessLevel.WRITER); D... |
@Test public void testAddFieldValuesFromBigQueryToPreviewListWorksWithNullValues() { DataSetPreviewValueList dataSetPreviewValueList = new DataSetPreviewValueList(); List<DataSetPreviewValueList> valuePreviewList = ImmutableList.of(dataSetPreviewValueList); List<FieldValue> fieldValueListRows = ImmutableList.of(FieldVa... | @VisibleForTesting public void addFieldValuesFromBigQueryToPreviewList( List<DataSetPreviewValueList> valuePreviewList, FieldValueList fieldValueList) { IntStream.range(0, fieldValueList.size()) .forEach( columnNumber -> valuePreviewList .get(columnNumber) .addQueryValueItem( Optional.ofNullable(fieldValueList.get(colu... | DataSetController implements DataSetApiDelegate { @VisibleForTesting public void addFieldValuesFromBigQueryToPreviewList( List<DataSetPreviewValueList> valuePreviewList, FieldValueList fieldValueList) { IntStream.range(0, fieldValueList.size()) .forEach( columnNumber -> valuePreviewList .get(columnNumber) .addQueryValu... | DataSetController implements DataSetApiDelegate { @VisibleForTesting public void addFieldValuesFromBigQueryToPreviewList( List<DataSetPreviewValueList> valuePreviewList, FieldValueList fieldValueList) { IntStream.range(0, fieldValueList.size()) .forEach( columnNumber -> valuePreviewList .get(columnNumber) .addQueryValu... | DataSetController implements DataSetApiDelegate { @VisibleForTesting public void addFieldValuesFromBigQueryToPreviewList( List<DataSetPreviewValueList> valuePreviewList, FieldValueList fieldValueList) { IntStream.range(0, fieldValueList.size()) .forEach( columnNumber -> valuePreviewList .get(columnNumber) .addQueryValu... | DataSetController implements DataSetApiDelegate { @VisibleForTesting public void addFieldValuesFromBigQueryToPreviewList( List<DataSetPreviewValueList> valuePreviewList, FieldValueList fieldValueList) { IntStream.range(0, fieldValueList.size()) .forEach( columnNumber -> valuePreviewList .get(columnNumber) .addQueryValu... |
@Test(expected = BadRequestException.class) public void testGetQueryFailsWithNoCohort() { DataSetRequest dataSet = buildEmptyDataSetRequest(); dataSet = dataSet .addConceptSetIdsItem(CONCEPT_SET_ONE_ID) .domainValuePairs(ImmutableList.of(new DomainValuePair().domain(Domain.CONDITION))); dataSetController.generateCode( ... | public ResponseEntity<DataSetCodeResponse> generateCode( String workspaceNamespace, String workspaceId, String kernelTypeEnumString, DataSetRequest dataSetRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, workspaceId, WorkspaceAccessLevel.READER); ... | DataSetController implements DataSetApiDelegate { public ResponseEntity<DataSetCodeResponse> generateCode( String workspaceNamespace, String workspaceId, String kernelTypeEnumString, DataSetRequest dataSetRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceName... | DataSetController implements DataSetApiDelegate { public ResponseEntity<DataSetCodeResponse> generateCode( String workspaceNamespace, String workspaceId, String kernelTypeEnumString, DataSetRequest dataSetRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceName... | DataSetController implements DataSetApiDelegate { public ResponseEntity<DataSetCodeResponse> generateCode( String workspaceNamespace, String workspaceId, String kernelTypeEnumString, DataSetRequest dataSetRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceName... | DataSetController implements DataSetApiDelegate { public ResponseEntity<DataSetCodeResponse> generateCode( String workspaceNamespace, String workspaceId, String kernelTypeEnumString, DataSetRequest dataSetRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceName... |
@Test(expected = BadRequestException.class) public void testGetQueryFailsWithNoConceptSet() { DataSetRequest dataSet = buildEmptyDataSetRequest(); dataSet = dataSet .addCohortIdsItem(COHORT_ONE_ID) .domainValuePairs(ImmutableList.of(new DomainValuePair().domain(Domain.CONDITION))); dataSetController.generateCode( works... | public ResponseEntity<DataSetCodeResponse> generateCode( String workspaceNamespace, String workspaceId, String kernelTypeEnumString, DataSetRequest dataSetRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, workspaceId, WorkspaceAccessLevel.READER); ... | DataSetController implements DataSetApiDelegate { public ResponseEntity<DataSetCodeResponse> generateCode( String workspaceNamespace, String workspaceId, String kernelTypeEnumString, DataSetRequest dataSetRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceName... | DataSetController implements DataSetApiDelegate { public ResponseEntity<DataSetCodeResponse> generateCode( String workspaceNamespace, String workspaceId, String kernelTypeEnumString, DataSetRequest dataSetRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceName... | DataSetController implements DataSetApiDelegate { public ResponseEntity<DataSetCodeResponse> generateCode( String workspaceNamespace, String workspaceId, String kernelTypeEnumString, DataSetRequest dataSetRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceName... | DataSetController implements DataSetApiDelegate { public ResponseEntity<DataSetCodeResponse> generateCode( String workspaceNamespace, String workspaceId, String kernelTypeEnumString, DataSetRequest dataSetRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceName... |
@Test public void testGetQueryDropsQueriesWithNoValue() { final DataSetRequest dataSet = buildEmptyDataSetRequest() .dataSetId(1l) .addCohortIdsItem(COHORT_ONE_ID) .addConceptSetIdsItem(CONCEPT_SET_ONE_ID); expectedException.expect(BadRequestException.class); DataSetCodeResponse response = dataSetController .generateCo... | public ResponseEntity<DataSetCodeResponse> generateCode( String workspaceNamespace, String workspaceId, String kernelTypeEnumString, DataSetRequest dataSetRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, workspaceId, WorkspaceAccessLevel.READER); ... | DataSetController implements DataSetApiDelegate { public ResponseEntity<DataSetCodeResponse> generateCode( String workspaceNamespace, String workspaceId, String kernelTypeEnumString, DataSetRequest dataSetRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceName... | DataSetController implements DataSetApiDelegate { public ResponseEntity<DataSetCodeResponse> generateCode( String workspaceNamespace, String workspaceId, String kernelTypeEnumString, DataSetRequest dataSetRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceName... | DataSetController implements DataSetApiDelegate { public ResponseEntity<DataSetCodeResponse> generateCode( String workspaceNamespace, String workspaceId, String kernelTypeEnumString, DataSetRequest dataSetRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceName... | DataSetController implements DataSetApiDelegate { public ResponseEntity<DataSetCodeResponse> generateCode( String workspaceNamespace, String workspaceId, String kernelTypeEnumString, DataSetRequest dataSetRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceName... |
@Test public void fillBuffer_prefixName() { workbenchConfig.billing.projectNamePrefix = "test-prefix-"; billingProjectBufferService.bufferBillingProjects(); ArgumentCaptor<String> captor = ArgumentCaptor.forClass(String.class); verify(mockFireCloudService).createAllOfUsBillingProject(captor.capture()); String billingPr... | public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } } | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } @Autowired BillingProjectBufferService(
Billing... | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } @Autowired BillingProjectBufferService(
Billing... | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } @Autowired BillingProjectBufferService(
Billing... |
@Test public void createDataSetMissingArguments() { DataSetRequest dataSet = buildEmptyDataSetRequest().name(null); List<Long> cohortIds = new ArrayList<>(); cohortIds.add(1L); List<Long> conceptIds = new ArrayList<>(); conceptIds.add(1L); List<DomainValuePair> valuePairList = new ArrayList<>(); DomainValuePair domainV... | @Override public ResponseEntity<DataSet> createDataSet( String workspaceNamespace, String workspaceFirecloudName, DataSetRequest dataSetRequest) { validateDataSetCreateRequest(dataSetRequest); final long workspaceId = workspaceService .getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, workspaceFireclo... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<DataSet> createDataSet( String workspaceNamespace, String workspaceFirecloudName, DataSetRequest dataSetRequest) { validateDataSetCreateRequest(dataSetRequest); final long workspaceId = workspaceService .getWorkspaceEnforceAccessLevelAndS... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<DataSet> createDataSet( String workspaceNamespace, String workspaceFirecloudName, DataSetRequest dataSetRequest) { validateDataSetCreateRequest(dataSetRequest); final long workspaceId = workspaceService .getWorkspaceEnforceAccessLevelAndS... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<DataSet> createDataSet( String workspaceNamespace, String workspaceFirecloudName, DataSetRequest dataSetRequest) { validateDataSetCreateRequest(dataSetRequest); final long workspaceId = workspaceService .getWorkspaceEnforceAccessLevelAndS... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<DataSet> createDataSet( String workspaceNamespace, String workspaceFirecloudName, DataSetRequest dataSetRequest) { validateDataSetCreateRequest(dataSetRequest); final long workspaceId = workspaceService .getWorkspaceEnforceAccessLevelAndS... |
@Test public void exportToNewNotebook() { DataSetRequest dataSet = buildEmptyDataSetRequest().name("blah"); dataSet = dataSet.addCohortIdsItem(COHORT_ONE_ID); dataSet = dataSet.addConceptSetIdsItem(CONCEPT_SET_ONE_ID); List<DomainValuePair> domainValuePairs = mockDomainValuePair(); dataSet.setDomainValuePairs(domainVal... | @Override public ResponseEntity<EmptyResponse> exportToNotebook( String workspaceNamespace, String workspaceId, DataSetExportRequest dataSetExportRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, workspaceId, WorkspaceAccessLevel.WRITER); workspace... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<EmptyResponse> exportToNotebook( String workspaceNamespace, String workspaceId, DataSetExportRequest dataSetExportRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, wo... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<EmptyResponse> exportToNotebook( String workspaceNamespace, String workspaceId, DataSetExportRequest dataSetExportRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, wo... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<EmptyResponse> exportToNotebook( String workspaceNamespace, String workspaceId, DataSetExportRequest dataSetExportRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, wo... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<EmptyResponse> exportToNotebook( String workspaceNamespace, String workspaceId, DataSetExportRequest dataSetExportRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, wo... |
@Test(expected = ForbiddenException.class) public void exportToNotebook_requiresActiveBilling() { DbWorkspace dbWorkspace = workspaceDao.findByWorkspaceNamespaceAndFirecloudNameAndActiveStatus( workspace.getNamespace(), WORKSPACE_NAME, DbStorageEnums.workspaceActiveStatusToStorage(WorkspaceActiveStatus.ACTIVE)); dbWork... | @Override public ResponseEntity<EmptyResponse> exportToNotebook( String workspaceNamespace, String workspaceId, DataSetExportRequest dataSetExportRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, workspaceId, WorkspaceAccessLevel.WRITER); workspace... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<EmptyResponse> exportToNotebook( String workspaceNamespace, String workspaceId, DataSetExportRequest dataSetExportRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, wo... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<EmptyResponse> exportToNotebook( String workspaceNamespace, String workspaceId, DataSetExportRequest dataSetExportRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, wo... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<EmptyResponse> exportToNotebook( String workspaceNamespace, String workspaceId, DataSetExportRequest dataSetExportRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, wo... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<EmptyResponse> exportToNotebook( String workspaceNamespace, String workspaceId, DataSetExportRequest dataSetExportRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, wo... |
@Test public void exportToExistingNotebook() { DataSetRequest dataSet = buildEmptyDataSetRequest(); dataSet = dataSet.addCohortIdsItem(COHORT_ONE_ID); dataSet = dataSet.addConceptSetIdsItem(CONCEPT_SET_ONE_ID); List<DomainValuePair> domainValuePairs = mockDomainValuePair(); dataSet.setDomainValuePairs(domainValuePairs)... | @Override public ResponseEntity<EmptyResponse> exportToNotebook( String workspaceNamespace, String workspaceId, DataSetExportRequest dataSetExportRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, workspaceId, WorkspaceAccessLevel.WRITER); workspace... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<EmptyResponse> exportToNotebook( String workspaceNamespace, String workspaceId, DataSetExportRequest dataSetExportRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, wo... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<EmptyResponse> exportToNotebook( String workspaceNamespace, String workspaceId, DataSetExportRequest dataSetExportRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, wo... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<EmptyResponse> exportToNotebook( String workspaceNamespace, String workspaceId, DataSetExportRequest dataSetExportRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, wo... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<EmptyResponse> exportToNotebook( String workspaceNamespace, String workspaceId, DataSetExportRequest dataSetExportRequest) { DbWorkspace dbWorkspace = workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, wo... |
@Test public void testGetValuesFromDomain() { when(mockBigQueryService.getTableFieldsFromDomain(Domain.CONDITION)) .thenReturn( FieldList.of( Field.of("FIELD_ONE", LegacySQLTypeName.STRING), Field.of("FIELD_TWO", LegacySQLTypeName.STRING))); List<DomainValue> domainValues = dataSetController .getValuesFromDomain( works... | @Override public ResponseEntity<DomainValuesResponse> getValuesFromDomain( String workspaceNamespace, String workspaceId, String domainValue) { workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, workspaceId, WorkspaceAccessLevel.READER); DomainValuesResponse response = new DomainValues... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<DomainValuesResponse> getValuesFromDomain( String workspaceNamespace, String workspaceId, String domainValue) { workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, workspaceId, WorkspaceAccessLevel.READER)... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<DomainValuesResponse> getValuesFromDomain( String workspaceNamespace, String workspaceId, String domainValue) { workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, workspaceId, WorkspaceAccessLevel.READER)... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<DomainValuesResponse> getValuesFromDomain( String workspaceNamespace, String workspaceId, String domainValue) { workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, workspaceId, WorkspaceAccessLevel.READER)... | DataSetController implements DataSetApiDelegate { @Override public ResponseEntity<DomainValuesResponse> getValuesFromDomain( String workspaceNamespace, String workspaceId, String domainValue) { workspaceService.getWorkspaceEnforceAccessLevelAndSetCdrVersion( workspaceNamespace, workspaceId, WorkspaceAccessLevel.READER)... |
@Test public void testBulkSyncTrainingStatusV1() throws org.pmiops.workbench.moodle.ApiException, NotFoundException { workbenchConfig.featureFlags.enableMoodleV2Api = false; doAnswer(i -> i.getArgument(0)).when(userService).syncComplianceTrainingStatusV1(any(), any()); offlineUserController.bulkSyncComplianceTrainingSt... | @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.getComplianceTrainingCompletionTime(); DataAccessLevel oldLev... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.get... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.get... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.get... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.get... |
@Test public void testBulkSyncTrainingStatusV2() throws org.pmiops.workbench.moodle.ApiException, NotFoundException { workbenchConfig.featureFlags.enableMoodleV2Api = true; doAnswer(i -> i.getArgument(0)).when(userService).syncComplianceTrainingStatusV2(any(), any()); offlineUserController.bulkSyncComplianceTrainingSta... | @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.getComplianceTrainingCompletionTime(); DataAccessLevel oldLev... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.get... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.get... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.get... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.get... |
@Test(expected = ServerErrorException.class) public void testBulkSyncTrainingStatusWithSingleUserErrorV1() throws org.pmiops.workbench.moodle.ApiException, NotFoundException { workbenchConfig.featureFlags.enableMoodleV2Api = false; doAnswer(i -> i.getArgument(0)).when(userService).syncComplianceTrainingStatusV1(any(), ... | @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.getComplianceTrainingCompletionTime(); DataAccessLevel oldLev... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.get... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.get... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.get... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.get... |
@Test(expected = ServerErrorException.class) public void testBulkSyncTrainingStatusWithSingleUserErrorV2() throws org.pmiops.workbench.moodle.ApiException, NotFoundException { workbenchConfig.featureFlags.enableMoodleV2Api = true; doAnswer(i -> i.getArgument(0)).when(userService).syncComplianceTrainingStatusV2(any(), a... | @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.getComplianceTrainingCompletionTime(); DataAccessLevel oldLev... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.get... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.get... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.get... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncComplianceTrainingStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { Timestamp oldTime = user.get... |
@Test public void testBulkSyncEraCommonsStatus() throws IOException, org.pmiops.workbench.firecloud.ApiException { doAnswer(i -> i.getArgument(0)) .when(userService) .syncEraCommonsStatusUsingImpersonation(any(), any()); offlineUserController.bulkSyncEraCommonsStatus(); verify(userService, times(3)).syncEraCommonsStatu... | @Override public ResponseEntity<Void> bulkSyncEraCommonsStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { if (user.getFirstSignInTime() == null) { continue; } Timestamp oldTime = user.getEraCommonsCom... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncEraCommonsStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { if (user.getFirstSignInTime() == nul... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncEraCommonsStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { if (user.getFirstSignInTime() == nul... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncEraCommonsStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { if (user.getFirstSignInTime() == nul... | OfflineUserController implements OfflineUserApiDelegate { @Override public ResponseEntity<Void> bulkSyncEraCommonsStatus() { int errorCount = 0; int userCount = 0; int changeCount = 0; int accessLevelChangeCount = 0; for (DbUser user : userService.getAllUsers()) { userCount++; try { if (user.getFirstSignInTime() == nul... |
@Test public void fillBuffer_capacity() { for (int i = 0; i < BUFFER_CAPACITY; i++) { billingProjectBufferService.bufferBillingProjects(); } int expectedCallCount = 0; billingProjectBufferService.bufferBillingProjects(); verify(mockFireCloudService, times((int) BUFFER_CAPACITY + expectedCallCount)) .createAllOfUsBillin... | public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } } | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } @Autowired BillingProjectBufferService(
Billing... | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } @Autowired BillingProjectBufferService(
Billing... | BillingProjectBufferService implements GaugeDataCollector { public void bufferBillingProjects() { int creationAttempts = this.workbenchConfigProvider.get().billing.bufferRefillProjectsPerTask; for (int i = 0; i < creationAttempts; i++) { bufferBillingProject(); } } @Autowired BillingProjectBufferService(
Billing... |
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