Datasets:
jason136
/
hmp_demonstration_projects

Dataset card Data Studio Files
xet
 Community
sequence
stringlengths
76
1.54k
disease
stringclasses
9 values
host_sex
stringclasses
2 values
isolation_source
stringclasses
14 values
analyte_type
stringclasses
2 values
bioproject_accession
stringclasses
15 values
biosample_accession
stringclasses
106 values
AGTTTGACTCCAGCAGCTGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGCGGACGCTTAAGTCAGTTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGATACTGGGTGTCTTGAGTACAGTAGAGGCAGGCGGAATTCGTGGGGTAGCGGGGAAATGCTTAGATATTACGAAGAAATCCGGTTGCGAAGGCAGGTTGCTGGACTGGAAATGAAGCTGACCGTCAATTCGTTTAAGTTTCACCGTTGCCGGCGTACTCCCCAGGTGGAATACTTAACGCTTTCGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
GGACTGACTCCAGCAGCCGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGTGGATTGTTAAGTCAGTTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGAAACTGGCAGTCTTGAGTACAGTAGAGGTGGGCGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATCACGAAGAACTCCGATTGCGAAGGCAGCTCACTAGACTGTTACTGACACTGACCGTCAATTCGTTTGAGTTTCACCGTTGCCGGCGTACTCCCCAGGTGGAATACTTAATGCTTTCGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
GTATTGACTCCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTAGGCGGAAAAATAAGTCTGATGTTAAAATGCGGGGCTCAACTCCGTATTGCGTTGGAAACTGTTTTTCTAGAGTACTGGAGAGGTGGGCGGAACTACAAGTGTAGAGGTGAAATTCGTAGATATTTGTAGGAATGCCGATGGAGAAGTCAGCTCACTGGACAGATACTGACGCTAAACCGTCAATTCGTTTGAGTTTCACACTTGCGTGCGTACTCCCCAGGCGGATCACTTATCGCGTTAGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
ACGATGACTCCAGCAGCCGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGCGGACGCTTAAGTCAGTTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGATACTGGGTGTCTTGAGTACAGTAGAGGCAGGCGGAATTTGTGGGGTAGCGGGGAAATGCTTAGATATCACGAAGAAATCCGGTTGCGAAGGCAGCCTTCTGGACCGTAACTGACGCTGGCCGTCAATTCGTTTGAGTTTCACCGTTGCCGGCGTGCTCCCCAGGTGGAATACTTAACGCTTTCGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
CTCTTGACTCCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTAGGCGGAAAAATAAGTCTGATGTTAAAATGCGGGGCTCAACTCCGTATTGCGTTGGAAACTGTTTTTCTAGAGTACTGGAGAGGTGGGCGGAACTACAAGTGTAGAGGTGAAATTCGCAGAAATTTGTAGGAATGCCGATGGAGAAGGCAGCTCACCGGACAGATACTGACGCTAAACCGTCTATTCCTTTGAGTTTCACACTTGCCTGCGTACTCCCCAGGCGGATCACTTATCGCGTTAGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
TGTATGACTCCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTAGGCGGAAAAATAAGTCTGATGTTAAAATGCGGGGCTCAACTCCGTATTGCGTTGGAAACTGTTTTTCTAGAGTACTGGAGAGGTGGGCGGAACTACAAGTGTAGAGGTGAAATTCGTAGATATTTGTAGGAATGCCGATGGAGAAGTCAGCTCACTGGACAGATACTGACGCTAAACCGTCAATTCGTTTGAGTTTCACACTTGCGTGCGTACTCCCCAGGCGGATCACTTATCGCGTTAGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
CACGTGACTCCAGCAGCTGCGGTAATACGTATGTCGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTAGGCGGAAAAATAAGTCTGATGTTAAAATGCGGGGCTCAACTCCGTATTGCGTTGGAAACTGTTTTTCTAGAGTACTGGAGAGGTGGGCGGAACTACAAGTGTAGAGGTGAAATTCGTAGATATTTGTAGGAATGCCGATGGAGAAGTCAGCTCACTGGACAGATACTGACGCTAAACCGTCAATTCGTTTGAGTTTCACACTTGCGTGCGTACTCCCCAGGCGGATCACTTATCGCGTTAGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
GATTTGACTCCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTAGGCGGAAAAATAAGTCTGATGTTAAAATGCGGGGCTCAACTCCGTATTGCGTTGGAAACTGTTTTTCTAGAGTACTAGAGAGGTGGGCGGAACTACAAGTGTAGAGGTGAAATTCGTAGATATTTGTAGGAATGCCGATGGAGAAGTCAGCTCACTGGACAGATACTGACGCTAAACCGTCAATTCTTTTGAGTTTCACACTTGCGTGCGTACTCCCCAGGCGGATCACTTATCGCGTTAGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
TGGTTGACTCCAGCAGCCGCGGTAATACGTATGTCGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTAGGCGGAAAAATAAGTCTGATGTTAAAATGCGGGGCTCAACTCCGTATTGCGTTGGAAACTGTTTTTCTAGAGTACTGGAGAGGTGGGCGGAACTACAAGTGTAGAGGTGAAATTCGTAGATATTTGTAGGAATGCCGATGGAGAAGTCAGCTCACTGGACAGAAAATGACGCTAAACCGTCAATTCGTTTGAGTTTCACACTTGCGTGCGTACTCCCCAGGCGGATCACTTATCGCGTTAGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
GGGGTGACTCCAGCAGCTGCGGTAATACGTATGTCGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTAGGCGGAAAAATAAGTCTGATGTTAAAATGCGGGGCTCAACTCCGTATTGCGTTGGAAACTGTTTTTCTAGAGTACTGGAGAGGTGGGCGGAACTACAAGTGTAGAGGTGAAATTCGTAGATATTTGTAGGAATGCCGATGGAGAAGTCAGCTCACTGGACAGATACTGACGCTAAACCGTCAATTCGTTTGAGTTTCACACTTGCGTGCGTACTCCCCAGGCGGATCACTTATCGCGTTAGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
GTTTTGACTCCAGCAGCTGCGGTAATACGTATGTCGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTAGGCGGAAAAATAAGTCTGATGTTAAAATGCGGGGCTCAACTCCGTATTGCGTTGGAAACTGTTTTTCTAGAGTACTAGAGAGGTGGGCGGAACTACAAGTGTAGAGGTGAAATTCGTAGATATTTGTAGGAATGCCGATGGAGAAGTCAGCTCACTGGACAGATACTGACGCTAAACCGTCAATTCGTTTGAGTTTCACACTTGCGTGCGTACTCCCCAGGCGGATCACTTATCGCGTTAGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
CAGATGACTCCAGCAGCTGCGGTAACACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTAGATAAGTCTGAAGTTAAAGGCTGTGGCTTAACCATAGTACGCTTTGGGAACTGTTTAACTTGAGTGCAGAAGGGGAGAGTGGAATTCCATGTGTAGCGGTGAAATGCGTAGATATATGGAGGAACACCGGTGGCGAAAGCGGCCCTCTGGGCCGTAACTGACGCTGGGCCGTCAATTCATTTGAGTTTCAACCTTGCGGTCGTACTCCCCAGGCGGAGTGCTTAATGCGTTAGCTGC...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
GGTATGACTCCAGCAGCCGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGCGGACGCTTAAGTCAGTTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGATACTGGGTGTCTTGAGTACAGTAGAGGCAGGCGGAATTTGTGGGGTAGCGGGGAAATGCTTAGATATCACGAAGAACTCCGATTGCGAAGGCAGCCTGCTGGAATGTAACTGACGCTGACCGTCAATTCTTTTGAGTTTCACCGTTGCCGGCGTACTCCCCAGGTGGAATACTTAACGCTTTCGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
ATTTTGACTCCAGCAGCTGCGGTAATACGTATGTCGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTAGGCGGAAAAATAAGTCTGATGTTAAAATGCGGGGCTCAACTCCGTATTGCGTTGGAAACTGTTTTTCTAGAGTACTGGAGAGGTGGGCGGAACTACAAGTGTAGAGGTGAAATTCGTAGATATTTGTAGGAATGCCGATGGAGAAGTCAGCTCACTGGCCAGATACTGACGCTAAACCGTCAATTCGTTTGAGTTTCACACTTGCGTGCGTACTCCCCAGGCGGATCACTTATCGCGTTAGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
AACGTGACTCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTAGACGGCGAAGCAAGTCTGAAGTGAAAACCCAGGGCTCAACCCTGGGACTGCTTTGGAAACTGTTTTGCTAGAGTGTCGGAGAGGTAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGCGGCGAAGGCGGCTTACTGGACGATAACTGACGTTGACCGTCAATTCGTTTGAGTTTCATTCTTGCGAACGTACTCCCCAGGTGGAATGCTTACTGCGTTTGCGGC...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
TGACTGACTCCAGCAGCTGCGGTAATACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTAGATAAGTCTGAAGTTAAAGGCTGTGGCTTAACCATAGTACGCTTTTGAAACTGTTTAACTTGAGTGCAGAAGGGGAGAGTGGAATTCCATGTGTAGCGGTGAAATGCGTAGATATATGGAGGAACACCGGTGGCGAAAGCGGCTCTCTGGGCTGTAACTGACGCTGAGCCGTCAATTCGTTTAAGTTTCAACCTTGCGGTCGTACTCCCCAGGCGGAGTGCTTAATGCGTTAGCTGC...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
CATCTGACTCCAGCAGCTGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGTGGATTGTTAAGTCAGTTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGAAACTGGCAGTCTTGAGTACAGTAGAGGTGGGCGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATCACGAAGAACTCCGATTGCGAAGGCAGCTCACTAGACTGTTACTGACACTGACCGTCAATTCTTTTAAGTTTCACCGTCGCCGGCGTACTCCCCAGGTGGAATACTTAATGCTTTCGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
ACTCTGACTCCAGCAGCTGCGGTAATACGTATGTCGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTAGGCGGAAAAATAAGTCTGATGTTAAAATGCGGGGCTCAACTCCGTATTGCGTTGGAAACTGTTTTTCTAGAGTACTGGAGAGGTGGGCGGAACTACAAGTGTAGAGGTGAAATTCGTAGATATTTGTAGGAATGCCGATGGAGAAGTCAGCTCACTGGACAGATACTGACGCTAAACCGTCAATTCGTTTGAGTTTCACACTTGCGTGCGTACTCCCCAGGCGGATCACTTATCGCGTTAGCTTC...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
GTAATGACTCCAGCAGCTGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGCGGACGCTTAAGTCAGTTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGATACTGGGTGTCTTGAGTACAGTAGAGGCAGGCGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATTACGAAGAACTCCGATTGCGAAGGCAGCCTGCTGGGCTGGAACTGACGCTGACCGTCAATTCGTTTGAGTTTCACCGTTGCCGGCGTACTCCCCAGGTGGAATACTTAACGCTTTCGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
TATCTGACTCCAGCAGCTGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGTGGATTGTTAAGTCAGTTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGAAACTGGCAGTCTTGAGTACAGTAGAGGTGGGCGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATCACGAAGAACTCCGATTGCGAAGGCAGCTCACTAGACTGTTACTGACACTGACCGTCAATTCGTTTGAGTTTCACCGTTGCCGGCGTACTCCCCAGGTGGAATACTTAATGCTTTCGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
GTGTTGACTCCAGCAGCTGCGGTAATACGTATGTCGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTAGGCGGAAAAATAAGTCTGATGTTAAAATGCGGGGCTCAACTCCGTATTGCGTTGGAAACTGTTTTTCTAGAGTACTGGAGAGGTGGGCGGAACTACAAGTGTAGAGGTGAAATTCGTAGATATTTGTAGGAATGCCGATGGAGAAGTCAGCTCACTGGACAGATACTGACGCTAAACCGTCAATTCATTTGAGTTTCACACTTGCGTGCGTACTCCCCAGGCGGATCACTTATCGCGTTAGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
AACTTGACTCCAGCAGCTGCGGTAAAACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGTGGATTGTTAAGTCAGTTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGAAACTGGCAGTCTTGAGTACAGTAGAGGTGGGCGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATCACGAAGAACTCCGATTGCGAAGGCAGCTCACTAGACTGTTACTGACACTGACCGTCAATTCTTTTAAGTTTCACCGTTGCCGGCGTACTCCCCAGGTGGAATACTTAATGCTTTCGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
ACCGTGACTCCAGCAGCTGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGCCTTTTAAGTCAGCGGTGAAAGTCTGTGGCTCAACCATAGAATTGCCGTTGAAACTGGGGGGCTTGAGTATGTTTGAGGCAGGCGGAATGCGTGGTGTAGCGGTGAAATGCATAGATATCACGCCGCACCCCGATTGCGAAGGCAGCCTGCCCAACCATTACTGACGCTGGCCGTCAATTCGTTTGAGTTTCACCGTTGCCGGCGTACTCCCCAGGTGGATCACTTAACGCTTTCGCTGT...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
GCGATGACTCCAGCAGCCGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGCGGACGCTTAAGTCAGTTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGATACTGGGTGTCTTGAGTACAGTAGAGGCAGGCGGAATTCGTGGGGTAGCGGTGAAATGCTTAGATATCACGAAGAAACCCGATTGCGAAGGCAGCCCGCTGGACTGTAACTGACGCCGACCGTCAATTCGTTTGAGTTTCACCGTTGCCGGCGTACTCCCCAGGTGGAATACTTAACGCTTTCGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
GAATTGACTCCAGCAGCTGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGCGGACGCTTAAGTCAGTTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGATACTGGGTGTCTTGAGTACAGTAGAGGCAGGCGGGATTCGGGGGGTAGGGGGGGAATGCTTAGATATCACGAAAAAATCCGGTTGCGAAGGCAGCCTGCTGGGCTGTAAATGAAGCCGGCCGTCAATTCGTTTGAGTTTCACCGTTGCCGGCGTACTCCCCAGGTGGAATACTTAACGCTTTCGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
TGGCTGACTCCAGCAGCCGCGGTAACACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGCGGACGCTTAAGTCAGTTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGATACTGGGTGTCTTGAGTACAGTAGAGGCAGGCGGAATTCGTGGGGTAGCGGTGAAATGCTTAGATATCACGAAGAACTCCGATTGCGAAGGCAGCTTGCTGGACTGTAAATGAAGCTGGCCGTCAATTCGTTTGAGTTTCACCGTTGCCGGCGTACTCCCCAGGTGGAATACTTAACGCTTTCGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
AGCTTGACTCCAGCAGCTGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGTGGATTGTTAAGTCAGTTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGAAACTGGCAGTCTTGAGTACAGTAGAGGTGGGCGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATCACGAAGAACTCCGATTGCGAAGGCAGCTCACTAGACTGTTACTGACACTGACCGTCAATTTCTTTGAGTTTCACCGTTGCCGGCGTACTCCCCAGGTGGAATACTTAATGCTTTCGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
TGAATGACTCCAGCAGCTGCGGTAATACGTATGTCGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGCGTCTAGGCGGAAAAATAAGTCTGATGTTAAAATGCGGGGCTCAACTCCGTATTGCGTTGGAAACTGTTTTTCTAGAGTACTGGAGAGGTGGGCGGAACTACAAGTGTAGAGGTGAAATTCGTAGATATTTGTAGGAATGCCGATGGAGAAGTCAGCTCACTGGACAGATACTGACGCTAAACCGTCAATTCGTTTAAGTTTCACACTTGCGTGCGTACTCCCCAGGCGGATCACTTATCGCGTTAGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
TATGTGACTCCAGCAGCCGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGTGGATTGTTAAGTCAGTTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGAAACTGGCAGTCTTGAGTACAGTAGAGGTGGGCGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATCACGAAGAACTCCGATTGCGAAGGCAGCTCACTAGACTGTTACTGACACTGACCGTCAATTCGTTTGAGTTTCACCGTTGCCGGCGTACTCCCCAGGTGGAATACTTAATGCTTTCGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913
GAGGTGACTCCAGCAGCCGCGGTAATACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGTGGATTGTTAAGTCAGTTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGAAACTGGCAGTCTTGAGTACAGTAGAGGTGGGCGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATCACGAAGAACTCCGATTGCGAAGGCAGCTCACTAGACTGTTACTGACACTGACCGTCAATTCATTTAAGTTTCACCGTTGCCGGCGTACTCCCCAGGTGGAATACTTAATGCTTTCGCTTG...
Ulcerative Colitis
male
pouch
DNA
PRJNA50637
SAMN06733913