im-sangwoon/chatprot-qwen2.5-32b-lora
Text Generation • Updated
messages listlengths 2 2 | source stringclasses 2
values | protein_id stringlengths 6 11 ⌀ |
|---|---|---|
[
{
"role": "user",
"content": "What are the official names of 50S ribosomal protein L34?"
},
{
"role": "assistant",
"content": "50S ribosomal protein L34."
}
] | UniProtQA | RL34_SYNPW |
[
{
"role": "user",
"content": "What is the protein family that 50S ribosomal protein L34 belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the bacterial ribosomal protein bL34 family."
}
] | UniProtQA | RL34_SYNPW |
[
{
"role": "user",
"content": "What is the function of Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta?"
},
{
"role": "assistant",
"content": "Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrie... | UniProtQA | ACCD_HAEIE |
[
{
"role": "user",
"content": "What are the official names of Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta?"
},
{
"role": "assistant",
"content": "Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, ACCase subunit beta, Acetyl-CoA carboxylase carboxyltransferase su... | UniProtQA | ACCD_HAEIE |
[
{
"role": "user",
"content": "What is the protein family that Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the AccD/PCCB family."
}
] | UniProtQA | ACCD_HAEIE |
[
{
"role": "user",
"content": "What are the subcellular locations of Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta?"
},
{
"role": "assistant",
"content": "Cytoplasm."
}
] | UniProtQA | ACCD_HAEIE |
[
{
"role": "user",
"content": "What is the function of Sodium/potassium-transporting ATPase subunit alpha-2?"
},
{
"role": "assistant",
"content": "This is the catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of sodium and potassium ions ac... | UniProtQA | AT1A2_RAT |
[
{
"role": "user",
"content": "What are the official names of Sodium/potassium-transporting ATPase subunit alpha-2?"
},
{
"role": "assistant",
"content": "Sodium/potassium-transporting ATPase subunit alpha-2, Na(+)/K(+) ATPase alpha-2 subunit, Na(+)/K(+) ATPase alpha(+) subunit, Sodium pump subun... | UniProtQA | AT1A2_RAT |
[
{
"role": "user",
"content": "What is the protein family that Sodium/potassium-transporting ATPase subunit alpha-2 belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIC subfamily."
}
] | UniProtQA | AT1A2_RAT |
[
{
"role": "user",
"content": "What are the subcellular locations of Sodium/potassium-transporting ATPase subunit alpha-2?"
},
{
"role": "assistant",
"content": "Membrane; Multi-pass membrane protein. Cell membrane; Multi-pass membrane protein."
}
] | UniProtQA | AT1A2_RAT |
[
{
"role": "user",
"content": "What is the function of Protein UL42?"
},
{
"role": "assistant",
"content": "Plays a role in the inhibition of host innate immune response to promote latent infection. Mechanistically, suppresses viral DNA-triggered signaling by impairing DNA binding and oligomeriz... | UniProtQA | UL42_HCMVM |
[
{
"role": "user",
"content": "What are the official names of Protein UL42?"
},
{
"role": "assistant",
"content": "Protein UL42."
}
] | UniProtQA | UL42_HCMVM |
[
{
"role": "user",
"content": "What is the protein family that Protein UL42 belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the Cytomegalovirus UL42 protein family."
}
] | UniProtQA | UL42_HCMVM |
[
{
"role": "user",
"content": "What are the subcellular locations of Protein UL42?"
},
{
"role": "assistant",
"content": "Host membrane; Single-pass membrane protein. Host cytoplasm. Note=Accumulates in the perinuclear region of the host cytoplasm, with some dispersal into the cytoplasm in a fine... | UniProtQA | UL42_HCMVM |
[
{
"role": "user",
"content": "What is the function of DNA/RNA-binding protein Alba?"
},
{
"role": "assistant",
"content": "Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architectur... | UniProtQA | ALBA_METTH |
[
{
"role": "user",
"content": "What are the official names of DNA/RNA-binding protein Alba?"
},
{
"role": "assistant",
"content": "DNA/RNA-binding protein Alba."
}
] | UniProtQA | ALBA_METTH |
[
{
"role": "user",
"content": "What is the protein family that DNA/RNA-binding protein Alba belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the histone-like Alba family."
}
] | UniProtQA | ALBA_METTH |
[
{
"role": "user",
"content": "What are the subcellular locations of DNA/RNA-binding protein Alba?"
},
{
"role": "assistant",
"content": "Cytoplasm. Chromosome."
}
] | UniProtQA | ALBA_METTH |
[
{
"role": "user",
"content": "What is the function of Nitrogenase-stabilizing/protective protein NifW?"
},
{
"role": "assistant",
"content": "May protect the nitrogenase Fe-Mo protein from oxidative damage."
}
] | UniProtQA | NIFW_RHOPT |
[
{
"role": "user",
"content": "What are the official names of Nitrogenase-stabilizing/protective protein NifW?"
},
{
"role": "assistant",
"content": "Nitrogenase-stabilizing/protective protein NifW."
}
] | UniProtQA | NIFW_RHOPT |
[
{
"role": "user",
"content": "What is the protein family that Nitrogenase-stabilizing/protective protein NifW belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the NifW family."
}
] | UniProtQA | NIFW_RHOPT |
[
{
"role": "user",
"content": "What is the function of SsrA-binding protein?"
},
{
"role": "assistant",
"content": "Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and... | UniProtQA | SSRP_NAUPA |
[
{
"role": "user",
"content": "What are the official names of SsrA-binding protein?"
},
{
"role": "assistant",
"content": "SsrA-binding protein, Small protein B."
}
] | UniProtQA | SSRP_NAUPA |
[
{
"role": "user",
"content": "What is the protein family that SsrA-binding protein belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the SmpB family."
}
] | UniProtQA | SSRP_NAUPA |
[
{
"role": "user",
"content": "What are the subcellular locations of SsrA-binding protein?"
},
{
"role": "assistant",
"content": "Cytoplasm. Note=The tmRNA-SmpB complex associates with stalled 70S ribosomes."
}
] | UniProtQA | SSRP_NAUPA |
[
{
"role": "user",
"content": "What is the function of Serine--tRNA ligase?"
},
{
"role": "assistant",
"content": "Catalyzes the attachment of serine to tRNA(Ser) in a two-step reaction: serine is first activated by ATP to form Ser-AMP and then transferred to the acceptor end of tRNA(Ser). Is pr... | UniProtQA | SYSC_RAT |
[
{
"role": "user",
"content": "What are the official names of Serine--tRNA ligase?"
},
{
"role": "assistant",
"content": "Serine--tRNA ligase, cytoplasmic, Seryl-tRNA synthetase, SerRS, Seryl-tRNA(Ser/Sec) synthetase."
}
] | UniProtQA | SYSC_RAT |
[
{
"role": "user",
"content": "What is the protein family that Serine--tRNA ligase belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the class-II aminoacyl-tRNA synthetase family. Type-1 seryl-tRNA synthetase subfamily."
}
] | UniProtQA | SYSC_RAT |
[
{
"role": "user",
"content": "What are the subcellular locations of Serine--tRNA ligase?"
},
{
"role": "assistant",
"content": "Cytoplasm. Nucleus. Note=Predominantly cytoplasmic, but a minor proportion is also found in the nucleus."
}
] | UniProtQA | SYSC_RAT |
[
{
"role": "user",
"content": "What is the function of DNA-directed RNA polymerase subunit omega?"
},
{
"role": "assistant",
"content": "Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subun... | UniProtQA | RPOZ_CLOB6 |
[
{
"role": "user",
"content": "What are the official names of DNA-directed RNA polymerase subunit omega?"
},
{
"role": "assistant",
"content": "DNA-directed RNA polymerase subunit omega, RNAP omega subunit, RNA polymerase omega subunit, Transcriptase subunit omega."
}
] | UniProtQA | RPOZ_CLOB6 |
[
{
"role": "user",
"content": "What is the protein family that DNA-directed RNA polymerase subunit omega belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the RNA polymerase subunit omega family."
}
] | UniProtQA | RPOZ_CLOB6 |
[
{
"role": "user",
"content": "What are the official names of 50S ribosomal protein L32?"
},
{
"role": "assistant",
"content": "50S ribosomal protein L32."
}
] | UniProtQA | RL32_VIBC1 |
[
{
"role": "user",
"content": "What is the protein family that 50S ribosomal protein L32 belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the bacterial ribosomal protein bL32 family."
}
] | UniProtQA | RL32_VIBC1 |
[
{
"role": "user",
"content": "What is the function of Outer capsid glycoprotein VP7?"
},
{
"role": "assistant",
"content": "Calcium-binding protein that interacts with rotavirus cell receptors once the initial attachment by VP4 has been achieved. Rotavirus attachment and entry into the host cel... | UniProtQA | VP7_ROTHS |
[
{
"role": "user",
"content": "What are the official names of Outer capsid glycoprotein VP7?"
},
{
"role": "assistant",
"content": "Outer capsid glycoprotein VP7."
}
] | UniProtQA | VP7_ROTHS |
[
{
"role": "user",
"content": "What is the protein family that Outer capsid glycoprotein VP7 belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the rotavirus VP7 family."
}
] | UniProtQA | VP7_ROTHS |
[
{
"role": "user",
"content": "What are the subcellular locations of Outer capsid glycoprotein VP7?"
},
{
"role": "assistant",
"content": "Virion. Host endoplasmic reticulum lumen. Note=The outer layer contains 780 copies of VP7, grouped as 260 trimers. Immature double-layered particles assembled... | UniProtQA | VP7_ROTHS |
[
{
"role": "user",
"content": "What is the function of Bifunctional protein Aas?"
},
{
"role": "assistant",
"content": "Plays a role in lysophospholipid acylation. Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiol... | UniProtQA | AAS_SHIF8 |
[
{
"role": "user",
"content": "What are the official names of Bifunctional protein Aas?"
},
{
"role": "assistant",
"content": "Bifunctional protein Aas."
}
] | UniProtQA | AAS_SHIF8 |
[
{
"role": "user",
"content": "What is the protein family that Bifunctional protein Aas belongs to?"
},
{
"role": "assistant",
"content": "In the C-terminal section; belongs to the ATP-dependent AMP-binding enzyme family."
}
] | UniProtQA | AAS_SHIF8 |
[
{
"role": "user",
"content": "What are the subcellular locations of Bifunctional protein Aas?"
},
{
"role": "assistant",
"content": "Cell inner membrane; Multi-pass membrane protein."
}
] | UniProtQA | AAS_SHIF8 |
[
{
"role": "user",
"content": "What are the official names of 50S ribosomal protein L33 2?"
},
{
"role": "assistant",
"content": "50S ribosomal protein L33 2."
}
] | UniProtQA | RL332_MYCMM |
[
{
"role": "user",
"content": "What is the protein family that 50S ribosomal protein L33 2 belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the bacterial ribosomal protein bL33 family."
}
] | UniProtQA | RL332_MYCMM |
[
{
"role": "user",
"content": "What is the function of DNA topoisomerase 4 subunit B?"
},
{
"role": "assistant",
"content": "Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA m... | UniProtQA | PARE_SALTI |
[
{
"role": "user",
"content": "What are the official names of DNA topoisomerase 4 subunit B?"
},
{
"role": "assistant",
"content": "DNA topoisomerase 4 subunit B, Topoisomerase IV subunit B."
}
] | UniProtQA | PARE_SALTI |
[
{
"role": "user",
"content": "What is the protein family that DNA topoisomerase 4 subunit B belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the type II topoisomerase family. ParE type 1 subfamily."
}
] | UniProtQA | PARE_SALTI |
[
{
"role": "user",
"content": "What are the official names of Uncharacterized protein DDB_G0286591?"
},
{
"role": "assistant",
"content": "Uncharacterized protein DDB_G0286591."
}
] | UniProtQA | Y7027_DICDI |
[
{
"role": "user",
"content": "What is the function of DNA mismatch repair protein MutL?"
},
{
"role": "assistant",
"content": "This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker',... | UniProtQA | MUTL_BACSU |
[
{
"role": "user",
"content": "What are the official names of DNA mismatch repair protein MutL?"
},
{
"role": "assistant",
"content": "DNA mismatch repair protein MutL."
}
] | UniProtQA | MUTL_BACSU |
[
{
"role": "user",
"content": "What is the protein family that DNA mismatch repair protein MutL belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the DNA mismatch repair MutL/HexB family."
}
] | UniProtQA | MUTL_BACSU |
[
{
"role": "user",
"content": "What are the official names of CKLF-like MARVEL transmembrane domain-containing protein 7?"
},
{
"role": "assistant",
"content": "CKLF-like MARVEL transmembrane domain-containing protein 7, Chemokine-like factor superfamily member 7, LNV."
}
] | UniProtQA | CKLF7_MOUSE |
[
{
"role": "user",
"content": "What is the protein family that CKLF-like MARVEL transmembrane domain-containing protein 7 belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the chemokine-like factor family."
}
] | UniProtQA | CKLF7_MOUSE |
[
{
"role": "user",
"content": "What are the subcellular locations of CKLF-like MARVEL transmembrane domain-containing protein 7?"
},
{
"role": "assistant",
"content": "Membrane; Multi-pass membrane protein."
}
] | UniProtQA | CKLF7_MOUSE |
[
{
"role": "user",
"content": "What is the function of Gamma-glutamyl phosphate reductase?"
},
{
"role": "assistant",
"content": "Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to f... | UniProtQA | PROA_ECOSM |
[
{
"role": "user",
"content": "What are the official names of Gamma-glutamyl phosphate reductase?"
},
{
"role": "assistant",
"content": "Gamma-glutamyl phosphate reductase, GPR, Glutamate-5-semialdehyde dehydrogenase, Glutamyl-gamma-semialdehyde dehydrogenase, GSA dehydrogenase."
}
] | UniProtQA | PROA_ECOSM |
[
{
"role": "user",
"content": "What is the protein family that Gamma-glutamyl phosphate reductase belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the gamma-glutamyl phosphate reductase family."
}
] | UniProtQA | PROA_ECOSM |
[
{
"role": "user",
"content": "What are the subcellular locations of Gamma-glutamyl phosphate reductase?"
},
{
"role": "assistant",
"content": "Cytoplasm."
}
] | UniProtQA | PROA_ECOSM |
[
{
"role": "user",
"content": "What is the function of 4-hydroxy-3-methylbut-2-enyl diphosphate reductase?"
},
{
"role": "assistant",
"content": "Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl di... | UniProtQA | ISPH_HELPS |
[
{
"role": "user",
"content": "What are the official names of 4-hydroxy-3-methylbut-2-enyl diphosphate reductase?"
},
{
"role": "assistant",
"content": "4-hydroxy-3-methylbut-2-enyl diphosphate reductase, HMBPP reductase."
}
] | UniProtQA | ISPH_HELPS |
[
{
"role": "user",
"content": "What is the protein family that 4-hydroxy-3-methylbut-2-enyl diphosphate reductase belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the IspH family."
}
] | UniProtQA | ISPH_HELPS |
[
{
"role": "user",
"content": "What are the official names of Protease HtpX homolog?"
},
{
"role": "assistant",
"content": "Protease HtpX homolog."
}
] | UniProtQA | HTPX_BURM9 |
[
{
"role": "user",
"content": "What is the protein family that Protease HtpX homolog belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the peptidase M48B family."
}
] | UniProtQA | HTPX_BURM9 |
[
{
"role": "user",
"content": "What are the subcellular locations of Protease HtpX homolog?"
},
{
"role": "assistant",
"content": "Cell inner membrane; Multi-pass membrane protein."
}
] | UniProtQA | HTPX_BURM9 |
[
{
"role": "user",
"content": "What is the function of Putative olfactory receptor 14L1?"
},
{
"role": "assistant",
"content": "Odorant receptor."
}
] | UniProtQA | O14L1_HUMAN |
[
{
"role": "user",
"content": "What are the official names of Putative olfactory receptor 14L1?"
},
{
"role": "assistant",
"content": "Putative olfactory receptor 14L1, Putative olfactory receptor 5AV1."
}
] | UniProtQA | O14L1_HUMAN |
[
{
"role": "user",
"content": "What is the protein family that Putative olfactory receptor 14L1 belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the G-protein coupled receptor 1 family."
}
] | UniProtQA | O14L1_HUMAN |
[
{
"role": "user",
"content": "What are the subcellular locations of Putative olfactory receptor 14L1?"
},
{
"role": "assistant",
"content": "Cell membrane; Multi-pass membrane protein."
}
] | UniProtQA | O14L1_HUMAN |
[
{
"role": "user",
"content": "What is the function of Lipoate-protein ligase A?"
},
{
"role": "assistant",
"content": "Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl onto the lipoyl domains of lipoate-dependent e... | UniProtQA | LPLA_SALPC |
[
{
"role": "user",
"content": "What are the official names of Lipoate-protein ligase A?"
},
{
"role": "assistant",
"content": "Lipoate-protein ligase A, Lipoate--protein ligase."
}
] | UniProtQA | LPLA_SALPC |
[
{
"role": "user",
"content": "What is the protein family that Lipoate-protein ligase A belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the LplA family."
}
] | UniProtQA | LPLA_SALPC |
[
{
"role": "user",
"content": "What are the subcellular locations of Lipoate-protein ligase A?"
},
{
"role": "assistant",
"content": "Cytoplasm."
}
] | UniProtQA | LPLA_SALPC |
[
{
"role": "user",
"content": "What is the function of ClpXP adapter protein SpxH?"
},
{
"role": "assistant",
"content": "Adapter protein required for efficient degradation of Spx by ClpXP under non-stress conditions (By similarity). Interaction with Spx stabilizes Spx and exposes the C-terminus... | UniProtQA | SPXH_GEOKA |
[
{
"role": "user",
"content": "What are the official names of ClpXP adapter protein SpxH?"
},
{
"role": "assistant",
"content": "ClpXP adapter protein SpxH."
}
] | UniProtQA | SPXH_GEOKA |
[
{
"role": "user",
"content": "What is the protein family that ClpXP adapter protein SpxH belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the SpxH family."
}
] | UniProtQA | SPXH_GEOKA |
[
{
"role": "user",
"content": "What are the subcellular locations of ClpXP adapter protein SpxH?"
},
{
"role": "assistant",
"content": "Cytoplasm."
}
] | UniProtQA | SPXH_GEOKA |
[
{
"role": "user",
"content": "What are the official names of Putative uncharacterized transmembrane protein C16E9.20?"
},
{
"role": "assistant",
"content": "Putative uncharacterized transmembrane protein C16E9.20."
}
] | UniProtQA | YB7K_SCHPO |
[
{
"role": "user",
"content": "What are the subcellular locations of Putative uncharacterized transmembrane protein C16E9.20?"
},
{
"role": "assistant",
"content": "Membrane; Multi-pass membrane protein."
}
] | UniProtQA | YB7K_SCHPO |
[
{
"role": "user",
"content": "What is the function of Enolase?"
},
{
"role": "assistant",
"content": "Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis."
}
] | UniProtQA | ENO_KLEP7 |
[
{
"role": "user",
"content": "What are the official names of Enolase?"
},
{
"role": "assistant",
"content": "Enolase, 2-phospho-D-glycerate hydro-lyase, 2-phosphoglycerate dehydratase."
}
] | UniProtQA | ENO_KLEP7 |
[
{
"role": "user",
"content": "What is the protein family that Enolase belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the enolase family."
}
] | UniProtQA | ENO_KLEP7 |
[
{
"role": "user",
"content": "What are the subcellular locations of Enolase?"
},
{
"role": "assistant",
"content": "Cytoplasm. Secreted. Cell surface. Note=Fractions of enolase are present in both the cytoplasm and on the cell surface. The export of enolase possibly depends on the covalent bindi... | UniProtQA | ENO_KLEP7 |
[
{
"role": "user",
"content": "What is the function of Periplasmic trehalase?"
},
{
"role": "assistant",
"content": "Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-media... | UniProtQA | TREA_ECO24 |
[
{
"role": "user",
"content": "What are the official names of Periplasmic trehalase?"
},
{
"role": "assistant",
"content": "Periplasmic trehalase, Alpha,alpha-trehalase, Alpha,alpha-trehalose glucohydrolase."
}
] | UniProtQA | TREA_ECO24 |
[
{
"role": "user",
"content": "What is the protein family that Periplasmic trehalase belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the glycosyl hydrolase 37 family."
}
] | UniProtQA | TREA_ECO24 |
[
{
"role": "user",
"content": "What are the subcellular locations of Periplasmic trehalase?"
},
{
"role": "assistant",
"content": "Periplasm."
}
] | UniProtQA | TREA_ECO24 |
[
{
"role": "user",
"content": "What is the function of Glutamate synthase 1 [NADH]?"
},
{
"role": "assistant",
"content": "Involved in glutamate biosynthesis. Required for non-photorespiratory ammonium assimilation. Probably involved in primary ammonium assimilation in roots."
}
] | UniProtQA | GLUT1_ARATH |
[
{
"role": "user",
"content": "What are the official names of Glutamate synthase 1 [NADH]?"
},
{
"role": "assistant",
"content": "Glutamate synthase 1 [NADH], chloroplastic, NADH-dependent glutamate synthase 1, NADH-GOGAT 1."
}
] | UniProtQA | GLUT1_ARATH |
[
{
"role": "user",
"content": "What is the protein family that Glutamate synthase 1 [NADH] belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the glutamate synthase family."
}
] | UniProtQA | GLUT1_ARATH |
[
{
"role": "user",
"content": "What are the subcellular locations of Glutamate synthase 1 [NADH]?"
},
{
"role": "assistant",
"content": "Plastid, chloroplast."
}
] | UniProtQA | GLUT1_ARATH |
[
{
"role": "user",
"content": "What is the function of Flavin prenyltransferase UbiX?"
},
{
"role": "assistant",
"content": "Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltran... | UniProtQA | UBIX_STRCO |
[
{
"role": "user",
"content": "What are the official names of Flavin prenyltransferase UbiX?"
},
{
"role": "assistant",
"content": "Flavin prenyltransferase UbiX."
}
] | UniProtQA | UBIX_STRCO |
[
{
"role": "user",
"content": "What is the protein family that Flavin prenyltransferase UbiX belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the UbiX/PAD1 family."
}
] | UniProtQA | UBIX_STRCO |
[
{
"role": "user",
"content": "What is the function of Uracil phosphoribosyltransferase?"
},
{
"role": "assistant",
"content": "Catalyzes the conversion of uracil and 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to UMP and diphosphate."
}
] | UniProtQA | UPP_HALS3 |
[
{
"role": "user",
"content": "What are the official names of Uracil phosphoribosyltransferase?"
},
{
"role": "assistant",
"content": "Uracil phosphoribosyltransferase, UMP pyrophosphorylase, UPRTase."
}
] | UniProtQA | UPP_HALS3 |
[
{
"role": "user",
"content": "What is the protein family that Uracil phosphoribosyltransferase belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the UPRTase family."
}
] | UniProtQA | UPP_HALS3 |
[
{
"role": "user",
"content": "What are the official names of Uncharacterized protein Rv2000?"
},
{
"role": "assistant",
"content": "Uncharacterized protein Rv2000."
}
] | UniProtQA | Y2000_MYCTU |
[
{
"role": "user",
"content": "What is the function of 50S ribosomal protein L19?"
},
{
"role": "assistant",
"content": "This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site."
}
] | UniProtQA | RL19_SALEP |
[
{
"role": "user",
"content": "What are the official names of 50S ribosomal protein L19?"
},
{
"role": "assistant",
"content": "50S ribosomal protein L19."
}
] | UniProtQA | RL19_SALEP |
[
{
"role": "user",
"content": "What is the protein family that 50S ribosomal protein L19 belongs to?"
},
{
"role": "assistant",
"content": "Belongs to the bacterial ribosomal protein bL19 family."
}
] | UniProtQA | RL19_SALEP |
End of preview. Expand in Data Studio
protein-sft-uniprot
단백질 연구 특화 LLM 학습을 위한 SFT(Supervised Fine-Tuning) 데이터셋입니다.
UniProt 데이터베이스와 단백질 문헌에서 추출한 Q&A 형식의 대화 데이터로 구성되어 있습니다.
Dataset Summary
| Total samples | 1,551,711 |
| Unique proteins | 455,613 |
| Format | JSONL (chat messages) |
| Size | 462MB |
Sources
| Source | Samples | Description |
|---|---|---|
| UniProtQA | 1,513,126 | UniProt 데이터베이스에서 구조화된 단백질 정보 추출 |
| Protein2Text-QA | 38,585 | 단백질 관련 문헌 기반 심화 Q&A |
Question Types
| Type | Samples | Example |
|---|---|---|
| Official names | 455,612 | "What are the official names of Hemoglobin subunit alpha?" |
| Protein family | 407,551 | "What is the protein family that Insulin belongs to?" |
| Function | 381,776 | "What is the function of Acetyl-CoA carboxylase?" |
| Subcellular location | 274,361 | "What are the subcellular locations of TP53?" |
| Sequence | 365 | Amino acid sequence related questions |
| Other (literature-based) | 32,046 | Genotype-phenotype relationships, expression significance, etc. |
Data Format
각 샘플은 messages 형식의 chat 구조입니다:
{
"messages": [
{"role": "user", "content": "What is the function of Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta?"},
{"role": "assistant", "content": "Component of the acetyl coenzyme A carboxylase (ACC) complex..."}
],
"source": "UniProtQA",
"protein_id": "ACCD_HAEIE"
}
Usage
from datasets import load_dataset
dataset = load_dataset("im-sangwoon/protein-sft-uniprot")
Intended Use
- 단백질 연구 특화 LLM fine-tuning
- Bioinformatics Q&A 시스템 구축
- 단백질 지식 기반 챗봇 학습
Related Model
이 데이터셋으로 학습된 모델: im-sangwoon/chatprot-qwen2.5-32b-lora
- Downloads last month
- 19
Models trained or fine-tuned on im-sangwoon/protein-sft-uniprot