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instruction stringclasses 1 value	input stringlengths 38 8.33k	output stringlengths 13 2.07k	history listlengths 2 2
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Methotrexate osteopathy in rheumatic disease. OBJECTIVE: To determine whether two adults with stress fractures receiving low weekly doses of methotrexate had methotrexate osteopathy. CASE REPORTS: Two adult patients developed features consistent with methotrexate osteopathy while receiving low weekly doses of methotrex...	[Iliac crest biopsy samples <Multi-tissue_structure>] [bone <Tissue>] [Bone <Tissue>] [osteoblast <Cell>] [bone <Organ>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Spacing effects on the memory for faces. 25 undergraduate women studied 12 stimulus pictures of female faces successively presented in spaced or massed conditions and made affective judgments for the pictures along a dimension of like to dislike. One week after the exposure (study) period, subjects were given an identi...	[faces <Organism_subdivision>] [faces <Organism_subdivision>] [faces <Organism_subdivision>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Relative phage haplotype frequencies in PAO1 samples, (A) planktonic, (B) biofilm 4 days, (C) biofilm 11 days.	[biofilm <Cell>] [biofilm <Cell>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Background Opioid analgesics are generally used to combat the pain associated with cancerous conditions. These agents not only inhibit respiratory function and cause constipation, but also induce other significant side effects such as addiction and tolerance, all of which further contribute to a reduced quality of life...	[cancerous <Pathological_formation>] [respiratory <Anatomical_system>] [cancer <Pathological_formation>] [cancer <Pathological_formation>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Absence of microbiota (germ-free conditions) accelerates the atherosclerosis in ApoE-deficient mice fed standard low cholesterol diet. AIM: The aim of our work was to determine the influence of intestinal bacteria on the development of atherosclerotic lesions using apolipoprotein E (ApoE)-deficient knockout mice. METHO...	[intestinal <Multi-tissue_structure>] [atherosclerotic lesions <Pathological_formation>] [lesions <Pathological_formation>] [thoracic <Multi-tissue_structure>] [abdominal aorta <Multi-tissue_structure>] [intestinal <Multi-tissue_structure>] [atherosclerotic aortic plaques <Pathological_formation>] [atherosclerotic plaq...	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	A potential role for the Src-like adapter protein SLAP-2 in signaling by the colony stimulating factor-1 receptor. The development of macrophages from myeloid progenitor cells is primarily controlled by the growth factor colony stimulating factor-1 (CSF-1) and its cognate receptor, a transmembrane tyrosine kinase encod...	[macrophages <Cell>] [myeloid progenitor cells <Cell>] [transmembrane <Cellular_component>] [cells <Cell>] [bone marrow <Multi-tissue_structure>] [macrophages <Cell>] [bone marrow macrophages <Cell>] [bone marrow macrophages <Cell>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	In vitro cytotoxic potential and mechanism of action of selected coumarins, using human renal cell lines. This study determined the selective cytotoxicity of eight coumarin compounds to human renal carcinoma cells, relative to non-carcinoma proximal tubular cells. Selectivity cytotoxicity was observed following exposur...	[renal cell lines <Cell>] [renal carcinoma cells <Cell>] [non-carcinoma proximal tubular cells <Cell>] [cell lines <Cell>] [carcinoma cells <Cell>] [renal cell carcinoma <Pathological_formation>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	ERK signaling is involved in decreasing BDNF-induced gene activity via Eph receptors Data provided so far suggest that ephrin-A5 might counteract BDNF-mediated gene expression and growth cone responses via decreasing ERK activity and nuclear localization (Figs. 2 and 3). To test this hypothesis more directly, we analyz...	[growth cone <Cellular_component>] [nuclear <Cellular_component>] [growth cone <Cellular_component>] [cortical neurons <Cell>] [neurons <Cell>] [growth cone <Cellular_component>] [growth cone <Cellular_component>] [neurons <Cell>] [Neurons <Cell>] [neurite <Cellular_component>] [neuron <Cell>] [growth cone <Cellular_co...	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Stimulation of the sodium pump by azide and high internal sodium: changes in the number of pumping sites and turnover rate. 1. The effects of 5 mM azide on [3H]ouabain uptake and 22Na efflux were determined. Both glycoside uptake and 22Na efflux were enhanced by azide. 2. Azide stimulated the Na pump in muscles whose p...	[muscles <Tissue>] [muscles <Tissue>] [intracellular <Immaterial_anatomical_entity>] [muscles <Tissue>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Lactotransferrin binding to its platelet receptor inhibits platelet aggregation. A fluorescent lactotransferrin probe was prepared by coupling 5-(([2-(carbhydrazino)methyl]-thio)acetyl)amino fluorescein to aldehyde groups that were produced by a mild periodic-acid oxidation of the glycan moieties of lactotransferrin. I...	[platelet <Cell>] [platelet <Cell>] [platelets <Cell>] [platelet <Cell>] [lymphocytes <Cell>] [platelet <Cell>] [plasma <Organism_substance>] [leukocyte <Cell>] [platelet <Cell>] [platelet <Cell>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Effects of hypertension and sympathetic denervation on cerebral blood flow in newborn pigs. To investigate the potential role of sympathetic nerves in preventing pronounced increases in cerebral blood flow, we evaluated the effects of abrupt hypertension on the cerebral circulation of newborn pigs with intact cerebral ...	[cerebral <Organ>] [blood <Organism_substance>] [nerves <Multi-tissue_structure>] [cerebral <Organ>] [blood <Organism_substance>] [cerebral <Organ>] [cerebral <Organ>] [cerebral <Organ>] [arterial <Multi-tissue_structure>] [blood <Organism_substance>] [brain <Organ>] [cerebrum <Multi-tissue_structure>] [blood <Organism...	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Introduction Yeast infections cause significant mortality in critically ill and immunocompromised patients. In particular, Candida species are the 4th most common cause of nosocomial bloodstream infections in the United States, and Cryptococcus neoformans, the commonest cause of fungal meningitis worldwide [1], [2]. Wh...	[blood <Organism_substance>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	No evidence for an influence of the human platelet antigen-1 polymorphism on the antiplatelet effects of glycoprotein IIb/IIIa inhibitors. This study investigated the hypothesis that the human platelet antigen-1 (HPA-1) polymorphism may influence the antiplatelet effects of glycoprotein (GP)IIb/IIIa inhibitors. Adenosi...	[platelet <Cell>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Outcomes The primary outcomes of this study are smoking abstinence rates post release as well as number of days to first cigarette after release. Seven day point-prevalence abstinence will be determined by combining self-reported tobacco use over the prior seven days and urine cotinine assays (below 200 ng/ml versus 20...	[urine <Organism_substance>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	[Suppurated acute obstructive cholangitis. Anatomoclinical and therapeutic aspects]. A total of 134 cases are discussed, with suppurated acute obstructive angiocholitis, that underwent surgical treatment over a period of 10 years, representing 12,8% of the total number of organic obstructions of the hepato-choledocus. ...	[hepato-choledocus <Multi-tissue_structure>] [Oddi sphincter <Tissue>] [hepatic <Organ>] [cancers <Pathological_formation>] [cyst <Pathological_formation>] [choledocus <Multi-tissue_structure>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Treatment effects on nigrostriatal projection integrity in partial 6-OHDA lesions: comparison of L-DOPA and pramipexole. There is controversy over potential effects of dopaminergic replacement therapies on the partially lesioned nigrostriatal dopaminergic projection. We evaluated indirect (levodopa, L-DOPA) versus dire...	[nigrostriatal <Multi-tissue_structure>] [lesions <Pathological_formation>] [lesioned nigrostriatal <Multi-tissue_structure>] [nigrostriatal lesion <Pathological_formation>] [striatal <Multi-tissue_structure>] [neuronal <Cell>] [unilateral median forebrain bundle lesions <Multi-tissue_structure>] [Lesion <Pathological_...	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Mineralization (red) of the aorta is prevented by local (left), but not global (right), Mgp expression.	[aorta <Multi-tissue_structure>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	The effects of oxidative stress on in vivo brain GSH turnover in young and mature mice. Glutathione (GSH) synthetase activities and GSH turnover rates were examined during severe oxidative stress in the mouse brain as induced by t-butylhydroperoxide (t-BuOOH). Brain GSH synthetase activities in 8-mo-old mice in the cor...	[brain <Organ>] [brain <Organ>] [Brain <Organ>] [cortex <Multi-tissue_structure>] [striatum <Multi-tissue_structure>] [thalamus <Multi-tissue_structure>] [hippocampus <Multi-tissue_structure>] [midbrain <Multi-tissue_structure>] [cerebellum <Multi-tissue_structure>] [brain <Organ>] [brain <Organ>] [cellular <Cell>] [br...	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	The effect of early diagnosis and treatment in cystic fibrosis: a seven-year study of 16 sibling pairs. Data on 16 sibling pairs with cystic fibrosis were analyzed to test the hypothesis that early treatment of this condition improves prognosis. Younger siblings' conditions were diagnosed before 1 year of age, usually ...	[pulmonary <Organ>] [pulmonary <Organ>] [chest <Organism_subdivision>] [lung <Organ>] [lung <Organ>] [lung <Organ>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Range of motion limitation after rotator cuff repair. HYPOTHESIS: This study was conducted to identify preoperative factors correlating with limited motion after rotator cuff repair (RCR) and to evaluate the affect of loss of motion on outcome. We hypothesized that patients with preoperative ROM loss, diabetes, and wor...	[rotator cuff <Organ>] [rotator cuff <Organ>] [shoulders <Organism_subdivision>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	TxA2, generated from arachidonic acid by cyclooxygenase 1 (COX-1) and Tx synthase, further amplifies platelet activation. COX-1 converts arachidonic acid into prostaglandin endoperoxides PGG2 and PGH2, the latter being, in turn, transformed by Tx synthase into TxA2, a potent amplifier of platelet aggregation with vaso...	[platelet <Cell>] [platelet <Cell>] [atheroma <Pathological_formation>] [platelet <Cell>] [micro-vessel <Tissue>] [thrombus <Organism_substance>] [platelet <Cell>] [platelets <Cell>] [cell surface <Cellular_component>] [extracellular <Immaterial_anatomical_entity>] [platelets <Cell>] [smooth muscle cells <Cell>] [plate...	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	The presence of nitrite during UVA irradiation protects from apoptosis. Nitrite occurs ubiquitously in biological fluids such as blood and sweat, representing an oxidation product of nitric oxide. Nitrite has been associated with a variety of adverse effects such as mutagenicity, carcinogenesis, and toxicity. In contra...	[biological fluids <Organism_substance>] [blood <Organism_substance>] [sweat <Organism_substance>] [endothelial cells <Cell>] [cell <Cell>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Colorimetrical rate assay for urinary dipeptidyl peptidase IV (DPPIV) activity using a new substrate. We synthesized a new substrate glycyl-L-proline 3,5-dibromo-4-hydroxyanilide (Gly-Pro-DBAP), for dipeptidyl peptidase IV (DPPIV). Its hydrolysis by DPPIV resulted in the formation of a chromophore, 2,6-dibromophenol-in...	[urinary <Organism_substance>] [urinary <Organism_substance>] [urinary <Organism_substance>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Tropical splenomegaly syndrome in Zambia: further observations and effects of cycloguanil and proguanil. Nineteen Zambian patients with the tropical splenomegaly syndrome and sinusoidal lymphocytosis on liver biopsy were studied. The association of macrobulinaemia with the tropical splenomegaly syndrome has again been ...	[sinusoidal <Tissue>] [liver <Organ>] [spleen <Organ>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	The most highly represented gene ontology themes in the neurosphere vs. differentiated cells comparison (F-G).	[neurosphere <Cell>] [differentiated cells <Cell>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Newly recognized syndrome with heminasal aplasia and ocular anomalies or wider spectrum of heminasal aplasia/atypical clefting syndrome? We report on five unrelated Brazilian patients with heminasal aplasia associated with diverses anomalies, including lateral proboscis, and anomalies of the eye and first branchial arc...	[ocular <Organ>] [eye <Organ>] [branchial arch <Multi-tissue_structure>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Neurohypophyseal granulomatous germinoma invading the right cavernous sinus: case report and review of the literature. We encountered a rare case of neurohypophyseal germinoma with a prominent granulomatous reaction, which invaded the right cavernous sinus. The neuroimaging and histopathology features in this case were...	[Neurohypophyseal granulomatous germinoma <Pathological_formation>] [right cavernous sinus <Immaterial_anatomical_entity>] [neurohypophyseal germinoma <Pathological_formation>] [right cavernous sinus <Immaterial_anatomical_entity>] [suprasellar lesions <Pathological_formation>] [Tumor <Pathological_formation>] [placent...	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	The impact of tracheal intubation on host defenses and risks for nosocomial pneumonia. Nosocomial pneumonia remains a common complication in patients treated with endotracheal intubation and mechanical ventilation and continues to have a significant impact on the mortality rate of these patients. Epidemiologic studies ...	[tracheal <Multi-tissue_structure>] [endotracheal tube <Multi-tissue_structure>] [airway <Multi-tissue_structure>] [mucosal <Multi-tissue_structure>] [mucociliary <Tissue>] [airway <Multi-tissue_structure>] [tracheobronchial cells <Cell>] [airway <Multi-tissue_structure>] [airway <Multi-tissue_structure>] [basement mem...	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Absence of antisperm antibodies in anejaculatory men. Antisperm antibodies were assessed in the serum samples of 73 men unable to ejaculate naturally and on the sperm cells of 13 of these men. None of the serum samples were found to be positive by sperm agglutination or sperm immobilization methods and antibodies were ...	[serum samples <Organism_substance>] [sperm cells <Cell>] [serum samples <Organism_substance>] [sperm <Cell>] [sperm <Cell>] [sperm cells <Cell>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Crystal data C15H12ClN3O2S2 F(000) = 752 Mr = 365.85 Dx = 1.507 Mg m-3 Monoclinic, P21/n Mo Kalpha radiation, lambda = 0.71073 A Hall symbol: -P 2yn Cell parameters from 25 reflections a = 10.175 (2) A theta = 9-12degrees b = 8.4958 (17) A micro = 0.51 mm-1 c = 19.318 (4) A T = 293 K beta = 105.01 (3)degrees Block, yel...	[Cell <Cell>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Role of interleukin 1 in antigen-specific T cell proliferation. The role of interleukin 1 (IL 1) in human antigen-specific T cell proliferation was examined. Nylon wool-purified T cells proliferated in the presence of autologous monocytes (Mo.) pulsed for 18 h with tetanus toxoid (TT) antigen (Mo.TT). Irradiation of Mo...	[T cell <Cell>] [T cell <Cell>] [T cells <Cell>] [autologous monocytes <Cell>] [Mo <Cell>] [Mo <Cell>] [Mo <Cell>] [T cell <Cell>] [Mo <Cell>] [Mo <Cell>] [Mo <Cell>] [peripheral blood mononuclear cells <Cell>] [leukocyte <Cell>] [thymocytes <Cell>] [T cells <Cell>] [Mo <Cell>] [Mo <Cell>] [T cell <Cell>] [Mo <Cell>] [...	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	1. Introduction Phase I clinical trials of new anticancer agents have been commonly conducted using the method of modified Fibonacci [1]. In brief, 3 patients are treated at a starting dose which is typically one tenth of the dose that is lethal to 10% of animals defined in preclinical studies. If none of the 3 patient...	[tumor <Pathological_formation>] [small-cell lung cancer <Pathological_formation>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Luciferase Assay For Fig. 1, 10 ng of TORC1, 5 ng of TORC2, and 15 ng of PKAalpha expression plasmids were transfected into HEK293 cells. For Fig. 2, 800 ng of total DNA consisted of 200 ng of the pMLHoxb1ARE luciferase reporter and 100 ng of each expression plasmid. A lacZ reporter was co-transfected to normalize tran...	[plasmids <Cellular_component>] [HEK293 cells <Cell>] [cells <Cell>] [cell lysates <Organism_substance>] [supernatant <Organism_substance>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Postpartum rubella immunization: association with development of prolonged arthritis, neurological sequelae, and chronic rubella viremia. Six women developed chronic long-term arthropathy after postpartum immunization against rubella. All individuals developed acute polyarticular arthritis within 12 days to three weeks...	[neurological <Anatomical_system>] [neurological <Anatomical_system>] [limb <Organism_subdivision>] [peripheral blood mononuclear cell <Cell>] [MNC <Cell>] [breast milk MNCs <Cell>] [peripheral blood MNCs <Cell>] [breast <Organism_subdivision>] [neurological <Anatomical_system>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	In situ alkylation of cysteine residues in a hydrophobic membrane protein immobilized on polyvinylidene difluoride membranes by electroblotting prior to microsequence and amino acid analysis. For identification of cysteine residues on microsequence analysis it is crucial to derivatize the sulfhydryl groups. This reacti...	[membrane <Cellular_component>] [membrane <Cellular_component>] [membrane <Cellular_component>] [membrane <Cellular_component>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Measurement of serum glycosylated proteins and glycosylated low density lipoprotein fraction in diabetes mellitus. A simple method was developed for estimating serum glycosylated protein levels using gel filtration with Bio-Gel P6 by determining the protein and sugar content in the void volume fraction. The glycosylate...	[serum <Organism_substance>] [serum <Organism_substance>] [blood <Organism_substance>] [serum <Organism_substance>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...
You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Organism_subdiv...	Cardiac gap junction configuration after an uncoupling treatment as a function of time. Rabbit ventricle either was fixed in glutaraldehyde without injury (control) or was injured before fixation, presumably causing electrical uncoupling of the gap junctions. All tissue was then processed for freeze-fracture. Replicas ...	[Cardiac <Organ>] [ventricle <Multi-tissue_structure>] [tissue <Tissue>] [Tissue <Tissue>] [tissue <Tissue>] [atrium <Multi-tissue_structure>] [tissue <Tissue>]	[ [ "You are provided with a text. Your objective is to identify, extract and classify all anatomical entities mentioned in the text, maintaining the order in which they appear. Types are [Pathological_formation, Organ, Tissue, Multi-tissue_structure, Developing_anatomical_structure, Cell, Anatomical_system, Orga...