repo stringclasses 1
value | instance_id stringclasses 6
values | base_commit stringclasses 6
values | patch stringclasses 6
values | test_patch stringclasses 6
values | problem_statement stringclasses 6
values | hints_text stringclasses 4
values | created_at stringdate 2017-12-07 00:01:14 2023-06-27 19:48:18 | version stringclasses 4
values | FAIL_TO_PASS stringclasses 6
values | PASS_TO_PASS stringclasses 6
values | environment_setup_commit stringclasses 4
values |
|---|---|---|---|---|---|---|---|---|---|---|---|
astropy/astropy | astropy__astropy-12907 | d16bfe05a744909de4b27f5875fe0d4ed41ce607 | diff --git a/astropy/modeling/separable.py b/astropy/modeling/separable.py
--- a/astropy/modeling/separable.py
+++ b/astropy/modeling/separable.py
@@ -242,7 +242,7 @@ def _cstack(left, right):
cright = _coord_matrix(right, 'right', noutp)
else:
cright = np.zeros((noutp, right.shape[1]))
- ... | diff --git a/astropy/modeling/tests/test_separable.py b/astropy/modeling/tests/test_separable.py
--- a/astropy/modeling/tests/test_separable.py
+++ b/astropy/modeling/tests/test_separable.py
@@ -28,6 +28,13 @@
p1 = models.Polynomial1D(1, name='p1')
+cm_4d_expected = (np.array([False, False, True, True]),
+ ... | Modeling's `separability_matrix` does not compute separability correctly for nested CompoundModels
Consider the following model:
```python
from astropy.modeling import models as m
from astropy.modeling.separable import separability_matrix
cm = m.Linear1D(10) & m.Linear1D(5)
```
It's separability matrix as y... | 2022-03-03T15:14:54Z | 4.3 | ["astropy/modeling/tests/test_separable.py::test_separable[compound_model6-result6]", "astropy/modeling/tests/test_separable.py::test_separable[compound_model9-result9]"] | ["astropy/modeling/tests/test_separable.py::test_coord_matrix", "astropy/modeling/tests/test_separable.py::test_cdot", "astropy/modeling/tests/test_separable.py::test_cstack", "astropy/modeling/tests/test_separable.py::test_arith_oper", "astropy/modeling/tests/test_separable.py::test_separable[compound_model0-result0]"... | 298ccb478e6bf092953bca67a3d29dc6c35f6752 | |
astropy/astropy | astropy__astropy-14182 | a5917978be39d13cd90b517e1de4e7a539ffaa48 | diff --git a/astropy/io/ascii/rst.py b/astropy/io/ascii/rst.py
--- a/astropy/io/ascii/rst.py
+++ b/astropy/io/ascii/rst.py
@@ -27,7 +27,6 @@ def get_fixedwidth_params(self, line):
class SimpleRSTData(FixedWidthData):
- start_line = 3
end_line = -1
splitter_class = FixedWidthTwoLineDataSplitter
@@ -3... | diff --git a/astropy/io/ascii/tests/test_rst.py b/astropy/io/ascii/tests/test_rst.py
--- a/astropy/io/ascii/tests/test_rst.py
+++ b/astropy/io/ascii/tests/test_rst.py
@@ -2,7 +2,11 @@
from io import StringIO
+import numpy as np
+
+import astropy.units as u
from astropy.io import ascii
+from astropy.table import Q... | Please support header rows in RestructuredText output
### Description
It would be great if the following would work:
```Python
>>> from astropy.table import QTable
>>> import astropy.units as u
>>> import sys
>>> tbl = QTable({'wave': [350,950]*u.nm, 'response': [0.7, 1.2]*u.count})
>>> tbl.write(sys.stdout,... | 2022-12-16T11:13:37Z | 5.1 | ["astropy/io/ascii/tests/test_rst.py::test_rst_with_header_rows"] | ["astropy/io/ascii/tests/test_rst.py::test_read_normal", "astropy/io/ascii/tests/test_rst.py::test_read_normal_names", "astropy/io/ascii/tests/test_rst.py::test_read_normal_names_include", "astropy/io/ascii/tests/test_rst.py::test_read_normal_exclude", "astropy/io/ascii/tests/test_rst.py::test_read_unbounded_right_colu... | 5f74eacbcc7fff707a44d8eb58adaa514cb7dcb5 | |
astropy/astropy | astropy__astropy-14365 | 7269fa3e33e8d02485a647da91a5a2a60a06af61 | diff --git a/astropy/io/ascii/qdp.py b/astropy/io/ascii/qdp.py
--- a/astropy/io/ascii/qdp.py
+++ b/astropy/io/ascii/qdp.py
@@ -68,7 +68,7 @@ def _line_type(line, delimiter=None):
_new_re = rf"NO({sep}NO)+"
_data_re = rf"({_decimal_re}|NO|[-+]?nan)({sep}({_decimal_re}|NO|[-+]?nan))*)"
_type_re = rf"^\s*((... | diff --git a/astropy/io/ascii/tests/test_qdp.py b/astropy/io/ascii/tests/test_qdp.py
--- a/astropy/io/ascii/tests/test_qdp.py
+++ b/astropy/io/ascii/tests/test_qdp.py
@@ -43,7 +43,18 @@ def test_get_tables_from_qdp_file(tmp_path):
assert np.isclose(table2["MJD_nerr"][0], -2.37847222222222e-05)
-def test_roundt... | ascii.qdp Table format assumes QDP commands are upper case
### Description
ascii.qdp assumes that commands in a QDP file are upper case, for example, for errors they must be "READ SERR 1 2" whereas QDP itself is not case sensitive and case use "read serr 1 2".
As many QDP files are created by hand, the expectation... | Welcome to Astropy 👋 and thank you for your first issue!
A project member will respond to you as soon as possible; in the meantime, please double-check the [guidelines for submitting issues](https://github.com/astropy/astropy/blob/main/CONTRIBUTING.md#reporting-issues) and make sure you've provided the requested deta... | 2023-02-06T19:20:34Z | 5.1 | ["astropy/io/ascii/tests/test_qdp.py::test_roundtrip[True]"] | ["astropy/io/ascii/tests/test_qdp.py::test_get_tables_from_qdp_file", "astropy/io/ascii/tests/test_qdp.py::test_roundtrip[False]", "astropy/io/ascii/tests/test_qdp.py::test_read_example", "astropy/io/ascii/tests/test_qdp.py::test_roundtrip_example", "astropy/io/ascii/tests/test_qdp.py::test_roundtrip_example_comma", "a... | 5f74eacbcc7fff707a44d8eb58adaa514cb7dcb5 |
astropy/astropy | astropy__astropy-14995 | b16c7d12ccbc7b2d20364b89fb44285bcbfede54 | diff --git a/astropy/nddata/mixins/ndarithmetic.py b/astropy/nddata/mixins/ndarithmetic.py
--- a/astropy/nddata/mixins/ndarithmetic.py
+++ b/astropy/nddata/mixins/ndarithmetic.py
@@ -520,10 +520,10 @@ def _arithmetic_mask(self, operation, operand, handle_mask, axis=None, **kwds):
elif self.mask is None and ope... | diff --git a/astropy/nddata/mixins/tests/test_ndarithmetic.py b/astropy/nddata/mixins/tests/test_ndarithmetic.py
--- a/astropy/nddata/mixins/tests/test_ndarithmetic.py
+++ b/astropy/nddata/mixins/tests/test_ndarithmetic.py
@@ -1310,3 +1310,42 @@ def test_raise_method_not_supported():
# raise error for unsupported ... | In v5.3, NDDataRef mask propagation fails when one of the operand does not have a mask
### Description
This applies to v5.3.
It looks like when one of the operand does not have a mask, the mask propagation when doing arithmetic, in particular with `handle_mask=np.bitwise_or` fails. This is not a problem in v5.2.
... | Welcome to Astropy 👋 and thank you for your first issue!
A project member will respond to you as soon as possible; in the meantime, please double-check the [guidelines for submitting issues](https://github.com/astropy/astropy/blob/main/CONTRIBUTING.md#reporting-issues) and make sure you've provided the requested deta... | 2023-06-27T19:48:18Z | 5.2 | ["astropy/nddata/mixins/tests/test_ndarithmetic.py::test_nddata_bitmask_arithmetic"] | ["astropy/nddata/mixins/tests/test_ndarithmetic.py::test_arithmetics_data[data10-data20]", "astropy/nddata/mixins/tests/test_ndarithmetic.py::test_arithmetics_data[data11-data21]", "astropy/nddata/mixins/tests/test_ndarithmetic.py::test_arithmetics_data[data12-data22]", "astropy/nddata/mixins/tests/test_ndarithmetic.py... | 362f6df12abf9bd769d4915fabf955c993ea22cf |
astropy/astropy | astropy__astropy-6938 | c76af9ed6bb89bfba45b9f5bc1e635188278e2fa | diff --git a/astropy/io/fits/fitsrec.py b/astropy/io/fits/fitsrec.py
--- a/astropy/io/fits/fitsrec.py
+++ b/astropy/io/fits/fitsrec.py
@@ -1261,7 +1261,7 @@ def _scale_back_ascii(self, col_idx, input_field, output_field):
# Replace exponent separator in floating point numbers
if 'D' in format:
- ... | diff --git a/astropy/io/fits/tests/test_checksum.py b/astropy/io/fits/tests/test_checksum.py
--- a/astropy/io/fits/tests/test_checksum.py
+++ b/astropy/io/fits/tests/test_checksum.py
@@ -205,9 +205,9 @@ def test_ascii_table_data(self):
# The checksum ends up being different on Windows, possibly due
... | Possible bug in io.fits related to D exponents
I came across the following code in ``fitsrec.py``:
```python
# Replace exponent separator in floating point numbers
if 'D' in format:
output_field.replace(encode_ascii('E'), encode_ascii('D'))
```
I think this may be incorrect because... | It is tested with `astropy/io/fits/tests/test_checksum.py:test_ascii_table_data` but indeed the operation is not inplace and it does not fail. Using 'D' is probably better, but since #5362 (I had vague memory about something like this ^^, see also #5353) anyway 'D' and 'E' are read as double, so I think there is not di... | 2017-12-07T00:01:14Z | 1.3 | ["astropy/io/fits/tests/test_checksum.py::TestChecksumFunctions::test_ascii_table_data", "astropy/io/fits/tests/test_table.py::TestTableFunctions::test_ascii_table"] | ["astropy/io/fits/tests/test_checksum.py::TestChecksumFunctions::test_sample_file", "astropy/io/fits/tests/test_checksum.py::TestChecksumFunctions::test_image_create", "astropy/io/fits/tests/test_checksum.py::TestChecksumFunctions::test_scaled_data", "astropy/io/fits/tests/test_checksum.py::TestChecksumFunctions::test_... | 848c8fa21332abd66b44efe3cb48b72377fb32cc |
astropy/astropy | astropy__astropy-7746 | d5bd3f68bb6d5ce3a61bdce9883ee750d1afade5 | diff --git a/astropy/wcs/wcs.py b/astropy/wcs/wcs.py
--- a/astropy/wcs/wcs.py
+++ b/astropy/wcs/wcs.py
@@ -1212,6 +1212,9 @@ def _array_converter(self, func, sky, *args, ra_dec_order=False):
"""
def _return_list_of_arrays(axes, origin):
+ if any([x.size == 0 for x in axes]):
+ ... | diff --git a/astropy/wcs/tests/test_wcs.py b/astropy/wcs/tests/test_wcs.py
--- a/astropy/wcs/tests/test_wcs.py
+++ b/astropy/wcs/tests/test_wcs.py
@@ -1093,3 +1093,21 @@ def test_keyedsip():
assert isinstance( w.sip, wcs.Sip )
assert w.sip.crpix[0] == 2048
assert w.sip.crpix[1] == 1026
+
+
+def test_zero... | Issue when passing empty lists/arrays to WCS transformations
The following should not fail but instead should return empty lists/arrays:
```
In [1]: from astropy.wcs import WCS
In [2]: wcs = WCS('2MASS_h.fits')
In [3]: wcs.wcs_pix2world([], [], 0)
-------------------------------------------------------------... | 2018-08-20T14:07:20Z | 1.3 | ["astropy/wcs/tests/test_wcs.py::test_zero_size_input"] | ["astropy/wcs/tests/test_wcs.py::TestMaps::test_consistency", "astropy/wcs/tests/test_wcs.py::TestMaps::test_maps", "astropy/wcs/tests/test_wcs.py::TestSpectra::test_consistency", "astropy/wcs/tests/test_wcs.py::TestSpectra::test_spectra", "astropy/wcs/tests/test_wcs.py::test_fixes", "astropy/wcs/tests/test_wcs.py::tes... | 848c8fa21332abd66b44efe3cb48b72377fb32cc |
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