id stringlengths 1 20 | gene_type stringclasses 3
values | seq_len int64 80 74.7k | n_taxa int64 38 48 | taxa sequencelengths 38 48 | msa sequencelengths 38 48 | ds_tree stringlengths 2.07k 2.65k | iqtree stringlengths 1.25k 1.59k |
|---|---|---|---|---|---|---|---|
4305 | exon | 354 | 42 | [
"CHAPE",
"ACACH",
"PHACA",
"GAVST",
"MELGA",
"NIPNI",
"COLLI",
"FULGL",
"APAVI",
"PODCR",
"CUCCA",
"PTEGU",
"FALPE",
"MESUN",
"EGRGA",
"CALAN",
"PHALE",
"CATAU",
"PELCR",
"TAUER",
"HALAL",
"ANAPL",
"CHAVO",
"APTFO",
"GEOFO",
"NESNO",
"MANVI",
"LEPDI",
"CHLUN",... | [
"CTCACCACTGGTCTGGAGCTGGTGGACTCCTGTATTAGATCACTGCAGGAGTCAGGGATACTTGATCCACAAGACTATTCAGCCAGTGAAAGACCCAGCCTCCTCTCCCAGAGCGCGCTCCAGCTCAATTCCAAACCTGAAGGGTCCTTCCAGTACTCAGCCAGCTACCACAGCAACCAGACCCTTGCTCTGGGCGAAACAGCAGCCGCCCAGCTC------CCAGCTCGCAGCAGCCAGGCCAGAGGTGCCATCCAGAGCTACAGCCAGGTA------------------------------------------... | (((COLLI:0.01856798960581206720,MESUN:0.00000035323794397186)51:0.00940841659065353754,(((MERNU:0.00711057950915463914,CATAU:0.00708526493667165080)11:0.00000035323794397186,(PTEGU:0.01475114273596912079,(HALLE:0.00000035323794397186,HALAL:0.00000035323794397186)80:0.00659529853560768872)44:0.00671238649736566242)21:0.... | (CHAPE:0.0425707611,(((((ACACH:0.0261282445,GEOFO:0.0307722137):0.0070678276,FALPE:0.0272190166):0.0021331314,(((PHACA:0.0056867664,(((GAVST:0.0045404165,COLLI:0.0377934647):0.0044726777,(((((NIPNI:0.0043751212,PHALE:0.0114222830):0.0000433560,(PODCR:0.0153368591,((((PTEGU:0.0578441080,MERNU:0.0251807141):0.0117371660,... |
1577 | exon | 2,181 | 45 | [
"NESNO",
"ACACH",
"COLLI",
"FALPE",
"GEOFO",
"CHLUN",
"TAUER",
"PHALE",
"GAVST",
"NIPNI",
"BUCRH",
"COLST",
"CALAN",
"CUCCA",
"PTEGU",
"CATAU",
"CORBR",
"BALRE",
"PICPU",
"STRCA",
"LEPDI",
"MANVI",
"PELCR",
"MESUN",
"HALLE",
"PYGAD",
"ANAPL",
"APTFO",
"CARCR",... | [
"---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------... | ((STRCA:0.03650751775033023866,EURHE:0.02109000067836499029)37:0.00206549894033784169,((((HALAL:0.00000144375975985432,HALLE:0.00000144375975985432)100:0.01213845706237047170,(NIPNI:0.02498379321642470868,(((MELGA:0.01477031297097393565,GALGA:0.01064153124723308218)100:0.06952865217984596780,(((COLST:0.0299730626807816... | (NESNO:0.0455852908,((((((((((((((ACACH:0.0340959815,((GEOFO:0.0408572443,TAEGU:0.0477886579):0.0495007222,CORBR:0.0349773232):0.0718030088):0.0108557451,MANVI:0.0718809373):0.0167329624,PICPU:0.0654308764):0.0077270265,(((HALLE:0.0000009997,HALAL:0.0000009997):0.0189617431,MELUN:0.0613265681):0.0019652722,(EURHE:0.037... |
976 | exon | 2,364 | 46 | ["PHACA","STRCA","PYGAD","NESNO","PHALE","PELCR","MELUN","EURHE","PODCR","CATAU","HALAL","HALLE","CU(...TRUNCATED) | ["---AGAAAAATGGAAATCGCCACCCCTCCTACATCAAAGTGCATTATATACTGGAAAAGAAAAGTCAAGTCTGAATATATGCGTCTTCGGCAGCTCAA(...TRUNCATED) | "(TINMA:0.01270561212102530244,(((GALGA:0.00296456485866994140,MELGA:0.00000079269295448029)75:0.004(...TRUNCATED) | "(PHACA:0.0254783104,((((((((((STRCA:0.0545426227,TINMA:0.0626055368):0.0254493647,((MELGA:0.0157630(...TRUNCATED) |
7813 | exon | 1,299 | 48 | ["STRCA","EURHE","ANAPL","BUCRH","CATAU","PICPU","CHAPE","LEPDI","COLST","CUCCA","GALGA","TAEGU","PE(...TRUNCATED) | ["--------------------------------------------------------------------------------------------------(...TRUNCATED) | "((GALGA:0.00626442519534947759,MELGA:0.00829797409011084897)81:0.00625012259082330553,(STRCA:0.0220(...TRUNCATED) | "(STRCA:0.0775527782,(((((((((((((((EURHE:0.0609882174,(((((ANAPL:0.1013966316,TINMA:0.2521122948):0(...TRUNCATED) |
4156 | exon | 1,263 | 47 | ["NIPNI","GEOFO","TAEGU","FULGL","CHLUN","MESUN","CORBR","BALRE","STRCA","MANVI","BUCRH","NESNO","CA(...TRUNCATED) | ["--------------------------------------------------------------------------------------------------(...TRUNCATED) | "(STRCA:0.03055675260012473068,(ANAPL:0.04539468272379958841,((COLLI:0.04065882710999305788,CHLUN:0.(...TRUNCATED) | "(NIPNI:0.0250783291,(((((((((((((((((GEOFO:0.0258194375,TAEGU:0.0216835919):0.0031757739,CORBR:0.03(...TRUNCATED) |
1039 | exon | 2,253 | 45 | ["ANAPL","GEOFO","COLLI","LEPDI","EGRGA","NIPNI","PHALE","HALAL","PODCR","APAVI","MELGA","CATAU","TA(...TRUNCATED) | ["--------------------------------------------------------------------------------------------------(...TRUNCATED) | "(MELGA:0.02497330398940517809,(ANAPL:0.05361590459375084605,(((CHAVO:0.09353677162950904678,(CHAPE:(...TRUNCATED) | "(ANAPL:0.0791640550,(((((((((GEOFO:0.0375379311,TAEGU:0.0752000123):0.0450174786,CORBR:0.0471074193(...TRUNCATED) |
8428 | exon | 1,962 | 45 | ["CARCR","CUCCA","COLST","NIPNI","EGRGA","EURHE","CORBR","BALRE","PYGAD","OPHHO","FULGL","PELCR","CA(...TRUNCATED) | ["GTTGAAGAGCTCACTAAGGAAATCCATAATAGG------AAGGAGAAAGATACATCTAGCGTAGAAGTACAGACAGAGAACTATGCTGCGTGGTCACA(...TRUNCATED) | "(TINMA:0.05398304988086164574,((ANAPL:0.03348043928322429891,(MELGA:0.04562094344261753004,GALGA:0.(...TRUNCATED) | "(CARCR:0.0224080729,((((((((((CUCCA:0.0579721751,(OPHHO:0.0357173450,FULGL:0.0192184999):0.00262157(...TRUNCATED) |
12936 | exon | 858 | 42 | ["HALAL","HALLE","BUCRH","GAVST","PICPU","CHLUN","APTFO","PELCR","MESUN","MANVI","CHAPE","EGRGA","CO(...TRUNCATED) | ["--------------------------------------------------------------------------------------------------(...TRUNCATED) | "(HALAL:0.00000095807659099811,((MELGA:0.02044215419115677848,CHAPE:0.00000095807659099811)41:0.0049(...TRUNCATED) | "(HALAL:0.0020542499,HALLE:0.0000028026,((((((((BUCRH:0.0478184309,(CHLUN:0.0326375253,APAVI:0.05195(...TRUNCATED) |
11339 | exon | 873 | 46 | ["ACACH","HALLE","CHAVO","COLLI","FALPE","CHLUN","COLST","PYGAD","TAEGU","NIPNI","PICPU","CALAN","PE(...TRUNCATED) | ["ATGACACTCTTTTCTTCCCTCACCCCATTATATATAGCCATTATATGTGTTTTGATTGGGGTAATATTCAAGAAGACTAATGGAGAGAAGGAAAAACG(...TRUNCATED) | "(APTFO:0.00556564962764935760,((MELUN:0.01113105090462754299,NESNO:0.02077161801021582335)88:0.0167(...TRUNCATED) | "(ACACH:0.0444454475,((((((HALLE:0.0000027852,HALAL:0.0012983301):0.0294419676,(((CHAVO:0.0317392085(...TRUNCATED) |
14001 | exon | 1,053 | 46 | ["CORBR","HALLE","COLST","GEOFO","TINMA","CHLUN","STRCA","BUCRH","GALGA","APTFO","PELCR","CHAVO","ME(...TRUNCATED) | ["ATGTCTCTTCCCCGACAGCTGCGAGAAAAGAGTGATTTTGACCAGCTTCCAGATGATGTACCTGTTTCAGCTAACATTGCAGATATTGAAGAGAAGAA(...TRUNCATED) | "(MESUN:0.02022475369453121535,(((((((PICPU:0.03902752770867373711,BUCRH:0.02583809497312150594)35:0(...TRUNCATED) | "(CORBR:0.0173870410,(((((((((((((HALLE:0.0014232379,HALAL:0.0000023322):0.0254761042,FULGL:0.016189(...TRUNCATED) |
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