pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
7lxy | G | I | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 03/05/21 | SARS-CoV-2 S/S2M11/S2X333 Global Refinement | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
2gsi | F | E | 0 | Y | peptide | null | thermonuclease | IMMUNE SYSTEM | 04/26/06 | Crystal Structure of a Murine Fab in Complex with an 11 Residue Peptide Derived from Staphylococcal Nuclease | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Armstrong, A.A., Amzel, L.M. | 2.81 | X-RAY DIFFRACTION | 0.293 | 0.221 | false | false | IGHV14 | IGKV3 | Kappa | null | null | null | null | null |
6ck9 | D | E | 0 | B | protein | null | gp41 ectodomain of envelope glycoprotein gp160 | VIRAL PROTEIN | 02/27/18 | Crystal Structure of HIV-1 ConC_Base0 Prefusion Env Trimer in Complex with Human Antibody Fragment 3H109L and 35O22 variants at 3.5 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lai, Y.-T., Kwong, P.D. | 2.714 | X-RAY DIFFRACTION | 0.288 | 0.248 | false | true | unknown | unknown | unknown | null | null | null | null | null |
5xcv | D | E | 0 | F | peptide | null | pa14 peptide | IMMUNE SYSTEM | 03/23/17 | Crystal structure of NZ-1 Fv-clasp fragment with its antigen peptide | RATTUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT | rattus, homo sapiens | rattus, homo sapiens | homo sapiens | Arimori, T., Takagi, J. | 2.143 | X-RAY DIFFRACTION | 0.277 | 0.228 | false | true | IGHV5 | IGLV3 | Lambda | null | null | null | null | null |
5xcu | A | B | 0 | C | peptide | null | ha peptide | IMMUNE SYSTEM | 03/23/17 | Crystal structure of 12CA5 Fv-clasp fragment with its antigen peptide | MUS MUSCULUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | homo sapiens | Arimori, T., Takagi, J. | 2.454 | X-RAY DIFFRACTION | 0.247 | 0.199 | false | true | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
2wzp | K | null | 0 | G | protein | null | putative receptor binding protein | VIRAL PROTEIN | 12/01/09 | Structures of Lactococcal Phage p2 Baseplate Shed Light on a Novel Mechanism of Host Attachment and Activation in Siphoviridae | LACTOCOCCUS PHAGE P2; LAMA GLAMA | lama glama | null | lactococcus phage p2 | Sciara, G., Bebeacua, C., Bron, P., Tremblay, D., Ortiz-Lombardia, M., Lichiere, J., van Heel, M., Campanacci, V., Moineau, S., Cambillau, C. | 2.6 | X-RAY DIFFRACTION | 0.2078 | 0.1789 | false | true | IGHV1 | null | null | null | null | null | null | null |
7kn3 | H | L | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 11/04/20 | Crystal structure of SARS-CoV-2 spike protein receptor-binding domain complexed with a pre-pandemic antibody S-B8 Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Liu, H., Zhu, X., Wilson, I.A. | 2.251 | X-RAY DIFFRACTION | 0.222 | 0.186 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
6dfh | I | K | 0 | D | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/IMMUNE SYSTEM | 05/14/18 | BG505 MD64 N332-GT2 SOSIP trimer in complex with germline-reverted BG18 fragment antigen binding | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Ozorowski, G., Steichen, J.M., Schief, W.R., Ward, A.B. | 3.85 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
5umi | H | L | 0 | C | protein | null | toxin a | TOXIN/IMMUNE SYSTEM | 01/27/17 | Clostridium difficile TcdA-CROPs bound to PA50 Fab | CLOSTRIDIOIDES DIFFICILE; HOMO SAPIENS | homo sapiens | homo sapiens | clostridioides difficile | Kroh, H.K., Chandrasekaran, R., Rosenthal, K., Woods, R., Jin, X., Ohi, M.D., Nyborg, A.C., Rainey, G.J., Warrener, P., Spiller, B.W., Lacy, D.B. | 3.23 | X-RAY DIFFRACTION | 0.290 | 0.270 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
2kh2 | B | b | 58 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
5d93 | F | E | 0 | D | protein | null | sulfhydryl oxidase 1 | OXIDOREDUCTASE | 08/18/15 | Oxidoreductase Fragment of Mouse QSOX1 in Complex with a FAb Fragment from a Mouse QSOX1-Specific Antibody | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Grossman, I., Fass, D. | 2.201 | X-RAY DIFFRACTION | 0.236 | 0.174 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
6o8d | null | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/09/19 | Anti-CD28xCD3 CODV Fab bound to CD28 | HOMO SAPIENS | null | homo sapiens | null | Lord, D.M., Wei, R.R. | 3.547 | X-RAY DIFFRACTION | 0.356 | 0.272 | false | true | null | IGKV15 | Kappa | null | null | null | null | null |
1oar | I | M | 0 | I | Hapten | AZN | ALIZARIN RED | IMMUNE SYSTEM | 01/21/03 | Fv IgE SPE-7 in complex with Alizarin Red | RATTUS RATTUS | rattus rattus | rattus rattus | rattus rattus | James, L.C., Roversi, P., Tawfik, D. | 2.23 | X-RAY DIFFRACTION | 0.241 | 0.205 | false | true | IGHV1 | IGLV1 | Lambda | 0 | null | Other | 20 | 12610298 |
6mid | H | L | 0 | E | C | protein | protein | NA | NA | e protein | e protein | VIRUS/IMMUNE SYSTEM | 09/19/18 | Cryo-EM structure of the ZIKV virion in complex with Fab fragments of the potently neutralizing human monoclonal antibody ZIKV-195 | ZIKA VIRUS (ISOLATE ZIKV/HUMAN/FRENCH POLYNESIA/10087PF/2013); HOMO SAPIENS | homo sapiens | homo sapiens | zika virus (isolate zikv/human/frenchpolynesia/10087pf/2013) | zika virus (isolate zikv/human/frenchpolynesia/10087pf/2013) | Long, F., Rossmann, M.G. | 4 | ELECTRON MICROSCOPY | null | null | false | false | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
5n2k | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 02/07/17 | Structure of unbound Briakinumab FAb | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bloch, Y., Savvides, S.N. | 2.219 | X-RAY DIFFRACTION | 0.234 | 0.204 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
3u2s | A | B | 0 | C | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM | 10/04/11 | Crystal Structure of PG9 Fab in Complex with V1V2 Region from HIV-1 strain ZM109 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | McLellan, J.S., Pancera, M., Kwong, P.D. | 1.797 | X-RAY DIFFRACTION | 0.205 | 0.178 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
6oge | C | B | 0 | A | protein | null | receptor tyrosine-protein kinase erbb-2 | transferase/immune system | 04/02/19 | Cryo-EM structure of Her2 extracellular domain-Trastuzumab Fab-Pertuzumab Fab complex | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Hao, Y., Yu, X., Bai, Y., Huang, X. | 4.36 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6t3f | H | L | 0 | F | protein | null | fusion glycoprotein f0 | VIRAL PROTEIN | 10/10/19 | Crystal structure Nipah virus fusion glycoprotein in complex with a neutralising Fab fragment | NIPAH VIRUS; ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | nipah virus | Avanzato, V.A., Pryce, R., Walter, T.S., Bowden, T.A. | 3.2 | X-RAY DIFFRACTION | 0.249 | 0.213 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
3piq | G | I | 0 | null | null | null | null | IMMUNE SYSTEM | 11/07/10 | Crystal structure of human 2909 Fab, a quaternary structure-specific antibody against HIV-1 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Changela, A., Gorny, M.K., Zolla-Pazner, S., Kwong, P.D. | 3.325 | X-RAY DIFFRACTION | 0.299 | 0.236 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
3ria | J | M | 0 | E | protein | null | avermectin-sensitive glutamate-gated chloride channel gluclalpha | TRANSPORT PROTEIN/IMMUNE SYSTEM | 04/13/11 | C. elegans glutamate-gated chloride channel (GluCl) in complex with Fab, ivermectin and iodide. | CAENORHABDITIS ELEGANS; MUS MUSCULUS | mus musculus | mus musculus | caenorhabditis elegans | Hibbs, R.E., Gouaux, E. | 3.8 | X-RAY DIFFRACTION | 0.280 | 0.266 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
7n3d | H | L | 0 | C | protein | null | nucleoprotein | VIRAL PROTEIN | 05/31/21 | Crystal Structure of Human Fab S24-1564 in the complex with the N-teminal Domain of Nucleocapsid protein from SARS CoV-2 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Kim, Y., Maltseva, N., Tesar, C., Jedrzejczak, R., Dugan, H., Stamper, C., Wilson, P., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID) | 1.53 | X-RAY DIFFRACTION | 0.190 | 0.157 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
4od2 | B | A | 0 | S | protein | null | tumor necrosis factor receptor superfamily member 10b | APOPTOSIS/IMMUNE SYSTEM | 01/09/14 | Crystal structure of the Fab fragment of an anti-DR5 antibody bound to DR5 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Hymowitz, S.G., Compaan, D. | 3.2 | X-RAY DIFFRACTION | 0.305 | 0.241 | false | true | IGHV3 | IGLV3 | Lambda | 0 | -12.327599 | Saturation Analysis | null | TBD |
7rp3 | H | I | 0 | A | protein | null | isoform 2b of gtpase kras | Hydrolase/Immune System | 08/03/21 | Crystal structure of GNE-1952 alkylated KRAS G12C in complex with 2H11 CLAMP | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Oh, A., Tam, C., Wang, W. | 2.0 | X-RAY DIFFRACTION | 0.234 | 0.191 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
1dn0 | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 12/15/99 | STRUCTURE OF THE FAB FRAGMENT FROM A HUMAN IGM COLD AGGLUTININ | HOMO SAPIENS | homo sapiens | homo sapiens | null | Cauerhff, A., Braden, B., Carvalho, J.G., Leoni, J., Polikarpov, I., Goldbaum, F. | 2.28 | X-RAY DIFFRACTION | 0.240 | 0.180 | false | false | IGHV4 | IGKV3D | Kappa | null | null | null | null | null |
3ln9 | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 02/02/10 | Crystal structure of the fibril-specific B10 antibody fragment | CAMELIDAE | camelidae | null | null | Parthier, C., Morgado, I., Stubbs, M.T., Faendrich, M. | 1.8 | X-RAY DIFFRACTION | 0.233 | 0.197 | false | true | IGHV1 | null | null | null | null | null | null | null |
7a25 | F | null | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/16/20 | Cryo-EM structure of the SARS-CoV-2 spike protein bound to neutralizing sybodies (Sb23) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Hallberg, B.M., Das, H. | 3.06 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
1ots | C | D | 0 | A | protein | null | voltage-gated clc-type chloride channel eric | MEMBRANE PROTEIN | 03/22/03 | Structure of the Escherichia coli ClC Chloride channel and Fab Complex | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Dutzler, R., Campbell, E.B., MacKinnon, R. | 2.51 | X-RAY DIFFRACTION | 0.299 | 0.264 | false | false | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
7zmm | F | null | 0 | B | protein | null | atp-dependent dna helicase q5 | HYDROLASE | 04/19/22 | Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G2-001 | Homo sapiens; Lama glama | lama glama | null | homo sapiens | Ye, M., Makola, M., Newman, J.A., Fairhead, M., MacLean, E., Krojer, T., Aitkenhead, H., Bountra, C., Gileadi, O., von Delft, F. | 2.5 | X-RAY DIFFRACTION | 0.281 | 0.240 | false | true | IGHV1 | null | null | null | null | null | null | null |
5hys | C | D | 0 | K | protein | null | ig epsilon chain c region | IMMUNE SYSTEM | 02/01/16 | Structure of IgE complexed with omalizumab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Pennington, L.F., Tarchevskaya, S.S., Sathiyamoorthy, K., Jardetzky, T.S. | 2.5 | X-RAY DIFFRACTION | 0.239 | 0.221 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -14.20185 | SPR | null | TBD |
2kh2 | B | b | 67 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
1maj | null | A | 12 | null | null | null | null | IMMUNOGLOBULIN | 09/16/93 | SOLUTION STRUCTURE OF AN ISOLATED ANTIBODY VL DOMAIN | MUS MUSCULUS | null | mus musculus | null | Constantine, K.L., Friedrichs, M.S., Metzler, W.J., Wittekind, M., Hensley, P., Mueller, L. | NOT | SOLUTION NMR | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
2hlf | C | D | 0 | A | protein | null | h(+)/cl(-) exchange transporter clca | PROTON TRANSPORT,MEMBRANE PROTEIN | 07/07/06 | Structure of the Escherichis coli ClC chloride channel Y445E mutant and Fab complex | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Accardi, A., Lobet, S., Williams, C., Miller, C., Dutzler, R. | 3.3 | X-RAY DIFFRACTION | 0.309 | 0.281 | false | false | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
4cau | D | d | 0 | C | protein | null | envelope protein e | VIRUS | 10/09/13 | THREE-DIMENSIONAL STRUCTURE OF DENGUE VIRUS SEROTYPE 1 COMPLEXED WITH 2 HMAB 14C10 FAB | DENGUE VIRUS 1; HOMO SAPIENS | homo sapiens | null | dengue virus 1 | TEOH, E.P., KUKKARO, P., TEO, E.W., LIM, A.P., TAN, T.T., YIP, A., SCHUL, W., AUNG, M., KOSTYUCHENKO, V.A., LEO, Y.S., CHAN, S.H., SMITH, K.G., CHAN, A.H., ZOU, G., OOI, E.E., KEMENY, D.M., TAN, G.K., NG, J.K., NG, M.L., ALONSO, S., FISHER, D., SHI, P.Y., HANSON, B.J., LOK, S.M., MACARY, P.A. | 7.0 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
3ijy | D | C | 0 | D | carbohydrate | KDA | polysaccharide | IMMUNE SYSTEM | 08/05/09 | Structure of S67-27 in Complex with Kdo(2.8)Kdo | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | mus musculus | Brooks, C.L., Blackler, R.J., Evans, S.V. | 2.85 | X-RAY DIFFRACTION | 0.284 | 0.237 | false | false | IGHV7 | IGKV8 | Kappa | 0.000001 | -8.241342 | Unknown | null | TBD |
6adc | C | D | 0 | A | protein | null | h(+)/cl(-) exchange transporter clca | TRANSPORT PROTEIN | 07/31/18 | Crystal structure of the E148A mutant CLC-ec1 in the presence of 50mM bromoacetate | ESCHERICHIA COLI (STRAIN K12); MUS MUSCULUS | mus musculus | mus musculus | escherichia coli (strain k12) | Lim, H.-H., Park, K. | 3.055 | X-RAY DIFFRACTION | 0.275 | 0.226 | false | false | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
3q1s | H | L | 0 | I | protein | null | interleukin-22 | IMMUNE SYSTEM/CYTOKINE | 12/17/10 | HIV-1 neutralizing antibody Z13e1 in complex with epitope display protein | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Stanfield, R.L., Julien, J.-P., Pejchal, R., Gach, J.S., Zwick, M.B., Wilson, I.A. | 2.15 | X-RAY DIFFRACTION | 0.260 | 0.207 | false | true | IGHV4 | IGKV3D | Kappa | 0 | -9.85 | ITC | 25 | 22033480 |
6n35 | H | L | 0 | H | carbohydrate | MAN | polysaccharide | IMMUNE SYSTEM | 11/14/18 | Anti-HIV-1 Fab 2G12 + Man1-2 re-refinement | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Calarese, D.A., Stanfield, R.L., Wilson, I.A. | 1.747 | X-RAY DIFFRACTION | 0.238 | 0.207 | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
7l6m | i | j | 0 | null | null | null | null | IMMUNE SYSTEM | 12/23/20 | Cryo-EM structure of DH898.1 Fab-dimer from local refinement of the Fab-dimer bound near the CD4 binding site of HIV-1 Env CH848 SOSIP trimer | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Manne, K., Edwards, R.J., Acharya, P. | 4.7 | ELECTRON MICROSCOPY | null | null | false | false | unknown | IGKV2 | Kappa | null | null | null | null | null |
4bel | E | null | 0 | B | protein | null | beta-secretase 2 | HYDROLASE/IMMUNE SYSTEM | 03/11/13 | BACE2 XAPERONE COMPLEX | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Banner, D.W., Kuglstatter, A., Benz, J., Stihle, M., Ruf, A. | 1.85 | X-RAY DIFFRACTION | 0.22234 | 0.18130 | false | true | IGHV3 | null | null | null | null | null | null | null |
6wer | C | D | 0 | A | protein | null | non-structural protein 1 | VIRAL PROTEIN | 04/02/20 | DENV2 NS1 in complex with neutralizing 2B7 Fab fragment | DENGUE VIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | dengue virus 2 | Akey, D.L., Smith, J.L. | 3.96 | X-RAY DIFFRACTION | 0.311 | 0.276 | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6igu | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 09/26/18 | Crystal structure of the hydrolytic antibody Fab 9C10 | MUS MUSCULUS | mus musculus | mus musculus | null | Yamaguchi, A., Tada, T., Tsuchiya, Y., Tsumuraya, T., Fujii, I. | 2.11 | X-RAY DIFFRACTION | 0.237 | 0.175 | false | false | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
4xak | H | L | 0 | A | protein | null | spike glycoprotein | IMMUNE SYSTEM | 12/15/14 | Crystal structure of potent neutralizing antibody m336 in complex with MERS Co-V RBD | HUMAN CORONAVIRUS EMC; HOMO SAPIENS | homo sapiens | homo sapiens | human coronavirus emc | Zhou, T., Dimtrov, D.S., Ying, T. | 2.45 | X-RAY DIFFRACTION | 0.249 | 0.198 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
3cm9 | A | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/21/08 | Solution Structure of Human SIgA2 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Almogren, A., Furtado, P.B., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6mqs | A | B | 0 | E | peptide | null | hiv fusion peptide residue 512-519 | IMMUNE SYSTEM | 10/10/18 | Vaccine-elicited NHP FP-targeting HIV neutralizing antibody A12V163-a.01 in complex with HIV fusion peptide (residue 512-519) | PLATYRRHINI; SYNTHETIC CONSTRUCT | platyrrhini | platyrrhini | human immunodeficiency virus 1 | Xu, K., Wang, Y., Kwong, P.D. | 2.997 | X-RAY DIFFRACTION | 0.247 | 0.233 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
7kh0 | S | s | 0 | A | protein | null | guanine nucleotide-binding protein g(i) subunit alpha-3,isoform gnas-2 of guanine nucleotide-binding protein g(s) subunit alpha isoforms short fusion | SIGNALING PROTEIN | 10/19/20 | Cryo-EM structure of the human arginine vasopressin AVP-vasopressin receptor V2R-Gs signaling complex | HOMO SAPIENS; LAMA GLAMA | homo sapiens | null | homo sapiens | Wang, L., Xu, J., Gao, S., Sun, D., Liu, H., Liu, Z., Du, Y., Zhang, C. | 2.8 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
5drx | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 09/16/15 | Crystal structure of the BCR Fab fragment from subset #4 case CLL240 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Minici, C., Degano, M. | 2.104 | X-RAY DIFFRACTION | 0.222 | 0.194 | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null |
5y9f | V | U | 0 | F | protein | null | major capsid protein l1 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/24/17 | Crystal structure of HPV59 pentamer in complex with the Fab fragment of antibody 28F10 | HUMAN PAPILLOMAVIRUS TYPE 59; MUS MUSCULUS | mus musculus | mus musculus | human papillomavirus type 59 | Li, S.W., Li, Z.H. | 3.35 | X-RAY DIFFRACTION | 0.261 | 0.230 | false | false | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
7a48 | A | null | 0 | B | peptide | null | aph colied-coil | DE NOVO PROTEIN | 08/19/20 | Crystal structure of the APH coiled-coil in complex with Nb49 | LAMA GLAMA; SYNTHETIC CONSTRUCT | lama glama | null | synthetic construct | Hadzi, S. | 1.547 | X-RAY DIFFRACTION | 0.212 | 0.179 | false | true | IGHV1 | null | null | null | null | null | null | null |
6vi2 | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 01/11/20 | Structure of the unaligned Fab4 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Cingolani, G., Lokareddy, R., Ko, Y. | 1.15 | X-RAY DIFFRACTION | 0.171 | 0.158 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1ohq | A | null | 0 | null | null | null | null | IMMUNOGLOBULIN | 05/30/03 | Crystal structure of HEL4, a soluble human VH antibody domain resistant to aggregation | HOMO SAPIENS | homo sapiens | null | null | Jespers, L., Schon, O., James, L.C., Veprintsev, D., Winter, G. | 2.0 | X-RAY DIFFRACTION | 0.26 | 0.182 | false | true | IGHV3 | null | null | null | null | null | null | null |
2p48 | B | null | 0 | A | protein | null | ribonuclease pancreatic | HYDROLASE/IMMUNE SYSTEM | 03/11/07 | Complex of a camelid single-domain vhh antibody fragment with RNASE A at 2.3A resolution: SE5B-tetra crystal form with five se-met sites (L4M, M34, M51, F68M, M83) in vhh scaffold. | CAMELUS DROMEDARIUS; BOS TAURUS | camelus dromedarius | null | bos taurus | Tereshko, V., Uysal, S., Koide, A., Margalef, K., Koide, S., Kossiakoff, A.A. | 2.3 | X-RAY DIFFRACTION | 0.297 | 0.241 | false | true | IGHV1 | null | null | 0 | -9.61 | Other | 30 | 18445622 |
6ju0 | K | O | 0 | null | null | null | null | IMMUNE SYSTEM | 04/12/19 | Mouse antibody 3.3 Fab in complex with PEG | MUS MUSCULUS | mus musculus | mus musculus | null | Lee, C.C., Ko, T.P., Lin, L.L., Wang, A.H.J. | 2.601 | X-RAY DIFFRACTION | 0.240 | 0.211 | false | true | IGHV6 | IGKV4 | Kappa | null | null | null | null | null |
6dc8 | H | L | 0 | P | peptide | null | microtubule-associated protein tau | IMMUNE SYSTEM | 05/04/18 | Fab/epitope complex of mouse monoclonal antibody 8B2 targeting a non-phosphorylated tau epitope. | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Chukwu, J.E., Kong, X.-P. | 1.799 | X-RAY DIFFRACTION | 0.219 | 0.179 | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4zfg | H | L | 0 | A | protein | null | angiopoietin-2 | SIGNALING PROTEIN/IMMUNE SYSTEM | 04/21/15 | Dual-specificity Fab 5A12 in complex with Angiopoietin 2 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Harris, S.F., Wu, P. | 2.27 | X-RAY DIFFRACTION | 0.223 | 0.177 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -11.324631 | SPR | null | TBD |
5dmj | B | null | 0 | A | protein | null | tumor necrosis factor receptor superfamily member 5 | IMMUNE SYSTEM/SIGNALING PROTEIN | 09/08/15 | Structure of the extracellular domain of the CD40 in complex with 3H56-5 DAB | HOMO SAPIENS | homo sapiens | null | homo sapiens | Sheriff, S. | 2.79 | X-RAY DIFFRACTION | 0.258 | 0.229 | false | true | IGHV3 | null | null | 0 | -11.290108 | SPR | null | TBD |
7cvy | I | J | 0 | G | protein | null | e2 glycoprotein | IMMUNE SYSTEM/VIRUS | 08/27/20 | Cryo-EM structure of Chikungunya virus in complex with Fab fragments of mAb CHK-124 | MUS MUSCULUS; CHIKUNGUNYA VIRUS | mus musculus | mus musculus | chikungunya virus | Zhou, Q.F., Fox, J.M., Earnest, J.T., Ng, T.S., Kim, A.S., Fibriansah, G., Kostyuchenko, V.A., Shu, B., Diamond, M.S., Lok, S.M. | 5.2 | ELECTRON MICROSCOPY | null | null | false | false | IGHV6 | IGKV6 | Kappa | null | null | null | null | null |
6yo6 | C | null | 0 | B | A | protein | protein | NA | NA | ic3b1 beta chain | ic3b1 alpha chain | IMMUNE SYSTEM | 04/14/20 | Structure of iC3b1 | LAMA GLAMA; HOMO SAPIENS | lama glama | null | homo sapiens | homo sapiens | Jensen, R.K., Andersen, G.R. | 6.0 | X-RAY DIFFRACTION | 0.266 | 0.241 | false | true | IGHV1 | null | null | null | null | null | null | null |
5vyf | H | L | 0 | F | protein | null | chimera of major allergen i polypeptide chain 2,majorallergen i polypeptide chain 1 | IMMUNE SYSTEM | 05/25/17 | Structure of single chain Fel d 1 bound to a neutralizing antibody | MUS MUSCULUS; FELIS CATUS | mus musculus | mus musculus | felis catus | Franklin, M.C. | 2.9 | X-RAY DIFFRACTION | 0.259 | 0.225 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -13.271583 | SPR | null | TBD |
7k7h | H | L | 0 | A | C | G | protein | protein | peptide | NA | NA | NA | pertussis like toxin subunit b | pertussis like toxin subunit b | pertussis toxin-like subunit arta | TOXIN | 09/22/20 | Density-fitted Model Structure of Antibody Variable Domains of TyTx1 in Complex with PltB pentamer of Typhoid Toxin | SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHI STR. CT18; MUS MUSCULUS | mus musculus | mus musculus | salmonella enterica subsp. enterica serovartyphi str. ct18 | salmonella enterica subsp. enterica serovartyphi str. ct18 | salmonella enterica subsp. enterica serovartyphi str. ct18 | Nguyen, T., Feathers, J.R., Fromme, J.C., Song, J. | 3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
5mp5 | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 12/15/16 | Crystal structure of DC8E8 Fab in the complex with a 14-mer tau peptide at pH 6.5 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Skrabana, R., Novak, M. | 2.31 | X-RAY DIFFRACTION | 0.277 | 0.235 | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
7wpe | Z | null | 0 | null | null | null | null | VIRAL PROTEIN | 01/23/22 | SARS-CoV-2 Omicron Variant S Trimer complexed with two JMB2002 Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS; LAMA GLAMA | lama glama | null | null | Yin, W., Xu, Y., Xu, P., Cao, X., Wu, C., Gu, C., He, X., Wang, X., Huang, S., Yuan, Q., Wu, K., Hu, W., Huang, Z., Liu, J., Wang, Z., Jia, F., Xia, K., Liu, P., Wang, X., Song, B., Zheng, J., Jiang, H., Cheng, X., Jiang, Y., Deng, S.J., Xu, H.E. | 2.69 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7p5v | I | null | 0 | C | protein | null | volume-regulated anion channel subunit lrrc8a | MEMBRANE PROTEIN | 07/15/21 | Structure of homomeric LRRC8A Volume-Regulated Anion Channel in complex with synthetic nanobody Sb1 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | synthetic construct | null | mus musculus | Deneka, D., Rutz, S., Sawicka, M. | 3.06 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4rdq | I | H | 0 | A | protein | null | bestrophin-1 | TRANSPORT PROTEIN | 09/19/14 | Calcium-activated chloride channel bestrophin-1, from chicken, in complex with Fab antibody fragments, chloride and calcium | GALLUS GALLUS; MUS MUSCULUS | mus musculus | mus musculus | gallus gallus | Dickson, V.K., Pedi, L., Long, S.B. | 2.85 | X-RAY DIFFRACTION | 0.234 | 0.217 | false | false | IGHV1 | IGKV12 | Kappa | 0 | -10.673721 | Unknown | null | TBD |
6y1l | H | L | 0 | L | Hapten | DEP | DIETHYL PHOSPHONATE | IMMUNE SYSTEM | 02/12/20 | Crystal structure of the paraoxon-modified A.17 antibody FAB fragment - L47R mutant | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Chatziefthimiou, S., Mokrushina, Y., Smirnov, I., Gabibov, A., Wilmanns, M. | 1.4 | X-RAY DIFFRACTION | 0.200 | 0.171 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
7zrc | J | K | 0 | A | protein | null | spike glycoprotein,fibritin | STRUCTURAL PROTEIN | 05/04/22 | OMI-38 FAB IN COMPLEX WITH SARS-COV-2 BETA SPIKE | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; ENTEROBACTERIA PHAGE T4; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2, enterobacteria phage t4 | Duyvesteyn, H.M.E., Ren, J., Stuart, D.I. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5it2 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/16/16 | Structure of a transglutaminase 2-specific autoantibody 693-10-B06 Fab fragment | HOMO SAPIENS | homo sapiens | homo sapiens | null | Chen, X., Dalhus, B., Hnida, K., Iversen, R., Sollid, L.M. | 1.7 | X-RAY DIFFRACTION | 0.204 | 0.185 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
5sy8 | H | L | 0 | O | protein | null | 10e8 epitope scaffold t117v2 | IMMUNE SYSTEM | 08/10/16 | Crystal structure of the complex of 10E8 Fab light chain mutant1 and T117v2 HIV-1 MPER scaffold | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | synthetic construct | Irimia, A., Wilson, I.A. | 1.62 | X-RAY DIFFRACTION | 0.214 | 0.172 | false | true | IGHV3 | IGLV3 | Lambda | 0 | -14.93954 | SPR | null | TBD |
3idx | H | L | 0 | G | protein | null | hiv-1 hxbc2 gp120 core | IMMUNE SYSTEM | 07/22/09 | Crystal structure of HIV-gp120 core in complex with CD4-binding site antibody b13, space group C222 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Chen, L., Kwon, Y.D., Zhou, T., Wu, X., O'Dell, S., Cavacini, L., Hessell, A.J., Pancera, M., Tang, M., Xu, L., Yang, Z.Y., Zhang, M.Y., Arthos, J., Burton, D.R., Dimitrov, D.S., Nabel, G.J., Posner, M., Sodroski, J., Wyatt, R., Mascola, J.R., Kwong, P.D. | 2.5 | X-RAY DIFFRACTION | 0.239 | 0.178 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -11.450945 | SPR | null | TBD |
1mcn | null | B | 0 | P | peptide | null | peptide n-acetyl-d-his-l-pro-nh2 | IMMUNE SYSTEM | 02/25/93 | PRINCIPLES AND PITFALLS IN DESIGNING SITE DIRECTED PEPTIDE LIGANDS | HOMO SAPIENS | null | homo sapiens | null | Edmundson, A.B., Harris, D.L., Fan, Z.-C., Guddat, L.W. | 2.7 | X-RAY DIFFRACTION | unknown | 0.183 | false | true | null | IGLV2 | Lambda | null | null | null | null | null |
6lbh | E | F | 0 | A | protein | null | magnesium transporter mgte | TRANSPORT PROTEIN/IMMUNE SYSTEM | 11/14/19 | Cryo-EM structure of the MgtE Mg2+ channel under Mg2+-free conditions | THERMUS THERMOPHILUS HB8; MUS MUSCULUS | mus musculus | mus musculus | thermus thermophilus hb8 | Hattori, M., Jin, F. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6ban | F | E | 0 | O | protein | null | inactive tyrosine-protein kinase transmembrane receptorror1 | IMMUNE SYSTEM | 10/14/17 | Potent and Selective Antitumor Activity of a T-Cell Engaging Bispecific Antibody Targeting a Membrane-Proximal Epitope of ROR1 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Park, H., Rader, C. | 1.95 | X-RAY DIFFRACTION | 0.196 | 0.160 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
2kqm | null | A | 19 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
6nnf | U | V | 0 | G | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM | 01/14/19 | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to VRC01 FR3-03 scFv in Complex with Crystallization Chaperones 3H109L Fab and 35O22 scFv at 3.5 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lai, Y.-T., Kwong, P.D. | 2.762 | X-RAY DIFFRACTION | 0.298 | 0.242 | false | true | unknown | unknown | unknown | null | null | null | null | null |
6ol7 | C | B | 0 | null | null | null | null | IMMUNE SYSTEM | 04/15/19 | Crystal structure of glVRC01 scFv in complex with anti-idiotype iv8 scFv | MUS MUSCULUS; HOMO SAPIENS | homo sapiens | homo sapiens | null | Weidle, C., Pancera, M. | 2.419 | X-RAY DIFFRACTION | 0.224 | 0.174 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5wts | A | null | 0 | null | null | null | null | LIGASE/LIGASE INHIBITOR | 12/14/16 | Green fluorescent protein linked peptide inhibitor PMI in complex with mdm2 | AEQUOREA VICTORIA; HOMO SAPIENS | aequorea victoria | null | null | Wongsantichon, J., Robinson, R.C., Ghadessy, F.J. | 3.004 | X-RAY DIFFRACTION | 0.244 | 0.204 | false | true | IGHV1 | null | null | null | null | null | null | null |
3p0v | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 09/29/10 | anti-EGFR/HER3 Fab DL11 alone | HOMO SAPIENS | homo sapiens | homo sapiens | null | Eigenbrot, C., Shia, S. | 2.85 | X-RAY DIFFRACTION | 0.280 | 0.227 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4mqt | B | null | 0 | A | protein | null | muscarinic acetylcholine receptor m2 | SIGNALING PROTEIN | 09/16/13 | Structure of active human M2 muscarinic acetylcholine receptor bound to the agonist iperoxo and allosteric modulator LY2119620 | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Kruse, A.C., Ring, A.M., Manglik, A., Hu, J., Hu, K., Eitel, K., Huebner, H., Pardon, E., Valant, C., Sexton, P.M., Christopoulos, A., Felder, C.C., Gmeiner, P., Steyaert, J., Weis, W.I., Garcia, K.C., Wess, J., Kobilka, B.K. | 3.7 | X-RAY DIFFRACTION | 0.301 | 0.250 | false | true | IGHV1 | null | null | null | null | null | null | null |
7wd7 | e | f | 0 | C | protein | null | heavy chain of s5d2 fab | VIRAL PROTEIN | 12/21/21 | SARS-CoV-2 Beta spike in complex with three S5D2 Fabs | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Wang, Y.F., Cong, Y. | 3.5 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
4ps4 | H | L | 0 | A | protein | null | interleukin-13 | IMMUNE SYSTEM | 03/06/14 | Crystal structure of the complex between IL-13 and M1295 FAB | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Teplyakov, A., Obmolova, G., Malia, T., Gilliland, G.L. | 2.8 | X-RAY DIFFRACTION | 0.271 | 0.211 | false | true | IGHV2 | IGKV3D | Kappa | 0 | -15.339731 | SPR | null | TBD |
5jw4 | S | T | 0 | H | G | protein | protein | NA | NA | hemagglutinin | hemagglutinin | IMMUNE SYSTEM | 05/11/16 | Structure of MEDI8852 Fab Fragment in Complex with H5 HA | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | influenza a virus | Neu, U., Collins, P.J., Walker, P.A., Vorlaender, M.K., Ogrodowicz, R.W., Martin, S.R., Gamblin, S.J., Skehel, J.J. | 3.7 | X-RAY DIFFRACTION | 0.285 | 0.274 | false | true | IGHV6 | IGKV1 | Kappa | null | null | null | null | null |
7jvb | D | null | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/20/20 | Crystal structure of the SARS-CoV-2 spike receptor-binding domain (RBD) with nanobody Nb20 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA | lama glama | null | severe acute respiratory syndrome coronavirus2 | Xiang, Y., Xiao, Z., Liu, H., Sang, Z., Schneidman-Duhovny, D., Zhang, C., Shi, Y. | 3.287 | X-RAY DIFFRACTION | 0.322 | 0.281 | false | true | IGHV1 | null | null | null | null | null | null | null |
1ct8 | D | C | 0 | D | Hapten | TAA | [4-(2,2,2-TRIFLUORO-ACETYLAMINO)-BENZYL]-PHOSPHONIC ACID MONO-[2-(2,2-DICHLORO-1-HYDROXY-ETHYLAMINO)-3-HYDROXY-1-(4-NITRO-PHENYL)-PROPYL] ESTER | IMMUNE SYSTEM | 08/20/99 | CATALYTIC ANTIBODY 7C8 COMPLEX | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Gigant, B., Tsumuraya, T., Fujii, I., Knossow, M. | 2.2 | X-RAY DIFFRACTION | 0.275 | 0.211 | false | false | IGHV1 | IGKV5 | Kappa | 0 | -8.898799 | Unknown | null | TBD |
5kvd | H | L | 0 | E | protein | null | zika envelope diii | VIRAL PROTEIN/IMMUNE SYSTEM | 07/14/16 | Zika specific antibody, ZV-2, bound to ZIKA envelope DIII | ZIKA VIRUS; MUS MUSCULUS | mus musculus | mus musculus | zika virus | Zhao, H., Nelson, C.A., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 1.65 | X-RAY DIFFRACTION | 0.221 | 0.190 | false | false | IGHV1 | IGKV8 | Kappa | 0 | -8.970066 | SPR | null | TBD |
2x89 | B | null | 0 | F | protein | null | beta-2-microglobulin | IMMUNE SYSTEM | 03/07/10 | Structure of the Beta2_microglobulin involved in amyloidogenesis | HOMO SAPIENS; CAMELUS DROMEDARIUS | homo sapiens | null | homo sapiens | Domanska, K., Srinivasan, V., Vanderhaegen, S., Pardon, E., Marquez, J.A., Bellotti, V., Wyns, L., Steyaert, J. | 2.16 | X-RAY DIFFRACTION | 0.26691 | 0.23813 | false | true | IGHV3 | null | null | 0 | -10.03 | SPR | null | 21220305 |
7mzj | N | M | 0 | B | protein | null | spike protein s1 | VIRAL PROTEIN | 05/24/21 | SARS-CoV-2 receptor binding domain bound to Fab WCSL 129 and Fab PDI 93 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Pymm, P., Dietrich, M.H., Tan, L.L., Chan, L.J., Tham, W.H. | 2.4 | X-RAY DIFFRACTION | 0.268 | 0.222 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5uoe | V | W | 0 | E | protein | null | insulin-degrading enzyme | Hydrolase/Immune System | 01/31/17 | Crystal Structure Analysis of Elbow-Engineered-Fab-Bound Human Insulin Degrading Enzyme (IDE) | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Liang, W.G., Bailey, L., Kossiakoff, T., Tang, W.J. | 3.8 | X-RAY DIFFRACTION | 0.270 | 0.220 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
3ncj | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 06/04/10 | Crystal structure of Fab15 Mut8 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Luo, J., Feng, Y., Gilliland, G.L. | 1.6 | X-RAY DIFFRACTION | 0.225 | 0.200 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
7e14 | N | null | 0 | A | B | protein | protein | NA | NA | gs | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 01/30/21 | Compound2_GLP-1R_OWL833_Gs complex structure | HOMO SAPIENS; BOS TAURUS; RATTUS NORVEGICUS; SYNTHETIC CONSTRUCT | synthetic construct | null | homo sapiens | bos taurus | Cong, Z.T., Chen, L.N., Ma, H.L., Yang, D.H., Xu, H.E., Zhang, Y., Wang, M.W. | 2.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
7wlw | H | L | 0 | A | protein | null | sodium-dependent dopamine transporter | MEMBRANE PROTEIN | 01/13/22 | X-ray structure of thermostabilized Drosophila dopamine transporter with GABA transporter1-like substitutions in the binding site, in complex with SKF89976a | Drosophila melanogaster; Mus musculus | mus musculus | mus musculus | drosophila melanogaster | Penmatsa, A., Joseph, D. | 2.9 | X-RAY DIFFRACTION | 0.264 | 0.235 | false | true | IGHV5 | IGKV4 | Kappa | null | null | null | null | null |
5yax | B | b | 0 | C | peptide | null | large envelope protein | IMMUNE SYSTEM | 09/02/17 | Crystal structure of a human neutralizing antibody bound to a HBV preS1 peptide | HOMO SAPIENS; HEPATITIS B VIRUS | homo sapiens | null | hepatitis b virus | Liu, X., Zheng, S., Ye, K., Sui, J. | 2.5 | X-RAY DIFFRACTION | 0.288 | 0.242 | true | true | unknown | unknown | unknown | null | null | null | null | null |
3cdf | null | D | 0 | null | null | null | null | IMMUNE SYSTEM | 02/26/08 | kI O18/O8 Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Baden, E.M., Randles, E.G., Thompson, J.R., Ramirez-Alvarado, M. | 1.53 | X-RAY DIFFRACTION | 0.231 | 0.189 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
7epb | D | null | 0 | B | protein | null | metabotropic glutamate receptor 2 | MEMBRANE PROTEIN | 04/26/21 | Cryo-EM structure of LY354740-bound mGlu2 homodimer | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Du, J., Wang, D., Fan, H., Tai, L., Lin, S., Han, S., Sun, F., Wu, B., Zhao, Q. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4fql | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 06/25/12 | Influenza B HA Antibody (Fab) CR8033 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Dreyfus, C., Laursen, N.S., Wilson, I.A. | 1.898 | X-RAY DIFFRACTION | 0.231 | 0.194 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
5ukq | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 01/23/17 | Structure of unliganded anti-gp120 CD4bs antibody DH522.2 Fab | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Nicely, N.I. | 2.1 | X-RAY DIFFRACTION | 0.230 | 0.174 | false | true | IGHV4 | IGLV2 | Lambda | null | null | null | null | null |
7tas | H | L | 0 | E | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/21/21 | SARS-CoV-2 spike in complex with the S2K146 neutralizing antibody Fab fragment (local refinement of the RBD and S2K146) | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Park, Y.J., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
6ejm | H | h | 0 | B | protein | null | cd81 antigen | CELL ADHESION | 09/22/17 | CRYSTAL STRUCTURE OF HUMAN CD81 LARGE EXTRACELLULAR LOOP IN COMPLEX WITH SINGLE CHAIN FV FRAGMENT 5 | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Kuglstatter, A., Harris, S.F., Villasenor, A. | 2.15 | X-RAY DIFFRACTION | 0.278 | 0.215 | true | true | unknown | unknown | unknown | 0 | -12.367557 | SPR | null | TBD |
7lo6 | J | I | 0 | C | protein | null | envelope glycoprotein bg505 sosip.664 gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 02/09/21 | Structure of CD4 mimetic BNM-III-170 in complex with BG505 SOSIP.664 HIV-1 Env trimer and 17b Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Jette, C.A., Bjorkman, P.J. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
3vi3 | H | L | 0 | D | protein | null | integrin beta-1 | CELL ADHESION/IMMUNE SYSTEM | 09/21/11 | Crystal structure of alpha5beta1 integrin headpiece (ligand-free form) | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Nagae, M., Nogi, T., Takagi, J. | 2.9 | X-RAY DIFFRACTION | 0.267 | 0.207 | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null |
6zdg | F | G | 0 | D | protein | null | spike glycoprotein | VIRAL PROTEIN | 06/14/20 | Association of three complexes of largely structurally disordered Spike ectodomain with bound EY6A Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Zhou, D., Zhao, Y., Fry, E.E., Ren, J., Stuart, D.I. | 4.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5bk0 | B | A | 0 | E | peptide | null | circumsporozoite protein nanp 5-mer | IMMUNE SYSTEM | 09/12/17 | Crystal structure of 663 Fab bound to circumsporozoite protein NANP 5-mer | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | Scally, S.W., Bosch, A., Triller, G., Wardemann, H., Julien, J.P. | 3.15 | X-RAY DIFFRACTION | 0.274 | 0.235 | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
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