rem stringlengths 1 53.3k | add stringlengths 0 80.5k | context stringlengths 6 326k | meta stringlengths 141 403 | input_ids list | attention_mask list | labels list |
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componentSpecification = defaultPicoContainer.getComponentSpecification(componentKey); | componentSpecification = componentRegistry.getComponentSpec(componentKey); | public Object resolve(PicoContainer picoContainer, ComponentSpecification compSpec, Class requestedType) throws PicoInitializationException { // TODO figure out a way to remove this ugly cast? DefaultPicoContainer defaultPicoContainer = (DefaultPicoContainer) picoContainer; Object co... | 14040 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/14040/47b2a79a3e2bb19b97ea7736273df40b79ab5472/ComponentParameter.java/buggy/java/picocontainer/src/java/org/picocontainer/defaults/ComponentParameter.java | [
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return RubyFixnum.newFixnum(getRuntime(), length()); | return getRuntime().newFixnum(length()); | public RubyFixnum size() { return RubyFixnum.newFixnum(getRuntime(), length()); } | 47134 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47134/870e1da9b41bfdbae259e1fc5f18fc8b76686998/RubyHash.java/clean/src/org/jruby/RubyHash.java | [
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throws IllegalResidueException, IOException; | throws SeqException, IllegalResidueException, IOException; | Sequence readSequence(StreamReader.Context context, ResidueParser resParser, SequenceFactory sf) throws IllegalResidueException, IOException; | 50397 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50397/168290afa5c9ea48df9499ba45c2d66d69197f4a/SequenceFormat.java/buggy/src/org/biojava/bio/seq/io/SequenceFormat.java | [
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return (MemberSignature[]) nonPrivateMethods.toArray(new MemberSignature[nonPrivateMethods.size()]); | return nonPrivateMethods.toArray(new MemberSignature[nonPrivateMethods.size()]); | public MemberSignature[] getNonPrivateMethodSignatures() { init(); return (MemberSignature[]) nonPrivateMethods.toArray(new MemberSignature[nonPrivateMethods.size()]); } | 17306 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/17306/2d46d291193579a7564649b4881c7ea8e02eda5b/SerialVersionUIDBuilder.java/clean/plugins/InspectionGadgets/src/com/siyeh/ig/fixes/SerialVersionUIDBuilder.java | [
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new DefaultHighlighter.DefaultHighlightPainter(sourceTextArea.getSelectionColor()) { public Shape paintLayer(Graphics g, int offs0, int offs1, Shape bounds, JTextComponent c, View view) { try { Shape extent = view.modelToView(offs0, Position.Bias.Forward, offs1, Position.Bias.Backward, bounds); Rectangle rect = extent.... | new DefaultHighlighter.DefaultHighlightPainter(sourceTextArea.getSelectionColor()) { public Shape paintLayer(Graphics g, int offs0, int offs1, Shape bounds, JTextComponent c, View view) { try { Shape extent = view.modelToView(offs0, Position.Bias.Forward, offs1, Position.Bias.Backward, bounds); Rectangle rect = extent.... | private void postInitComponents() { logger = new ConsoleLogger(this); viewPanelLayout = (CardLayout) viewPanel.getLayout(); // Console starts out disabled consoleSplitter.setDividerLocation(1.0); // List of bug group tabs. // This must be in the same order as GROUP_BY_ORDER_LIST! ... | 10715 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10715/a6faccf1f33035b730d9878d13d0da9fa199f1f8/FindBugsFrame.java/clean/findbugs/src/java/edu/umd/cs/findbugs/gui/FindBugsFrame.java | [
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preferenceTransfers = new ArrayList(); IExtensionRegistry registry = Platform.getExtensionRegistry(); readRegistry(registry, WorkbenchPlugin.PI_WORKBENCH, pluginPoint); } | preferenceTransfers = new ArrayList(); IExtensionRegistry registry = Platform.getExtensionRegistry(); readRegistry(registry, WorkbenchPlugin.PI_WORKBENCH, pluginPoint); } | protected void readPreferenceTransfers() { preferenceTransfers = new ArrayList(); IExtensionRegistry registry = Platform.getExtensionRegistry(); readRegistry(registry, WorkbenchPlugin.PI_WORKBENCH, pluginPoint); } | 56152 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56152/0c824a572640b8871fefdcfaf3031b6370d525a6/PreferenceTransferRegistryReader.java/clean/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/registry/PreferenceTransferRegistryReader.java | [
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} else if (type.typeParams().length > 0 && !isPrimitive(symbol)) { | } else if (type.typeParams().length > 0 && !monoPrimitive(symbol)) { | public Type transformInfo(Symbol symbol, Type type) { if (symbol.isClass()) { NewMember[] toAdd = membersToAdd(symbol); if (toAdd.length == 0) return type; else { Scope newMembers = new Scope(symbol.members()); for (int i = 0; i < ... | 10130 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10130/272ebd92493d51a38ef9068a7201d6f8abc3a1a1/TypesAsValuesPhase.java/buggy/sources/scalac/transformer/TypesAsValuesPhase.java | [
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AST __t992 = _t; AST tmp2187_AST_in = (AST)_t; | AST __t996 = _t; AST tmp2191_AST_in = (AST)_t; | public final void menu_opt(AST _t) throws RecognitionException { AST menu_opt_AST_in = (_t == ASTNULL) ? null : (AST)_t; if (_t==null) _t=ASTNULL; switch ( _t.getType()) { case BGCOLOR: case DCOLOR: case FGCOLOR: case PFCOLOR: { color_expr(_t); _t = _retTree; break; } case FONT: { AST __t989 = _... | 13952 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13952/daa15e07422d3491bbbb4d0060450c81983332a4/JPTreeParser.java/clean/trunk/org.prorefactor.core/src/org/prorefactor/treeparserbase/JPTreeParser.java | [
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if ( LogWriter.needsLogging && this instanceof SIPClientTransaction) { sipStack.getLogWriter().logMessage("fireTimer " + this + " retransmissionTicks " + retransmissionTimerTicksLeft); } | /* * if (sipStack.isLoggingEnabled()) { sipStack.getLogWriter().logDebug( * "fireTimer " + this + " retransmissionTicks " + * retransmissionTimerTicksLeft); } */ | final void fireTimer() { // If the timeout timer is enabled, if ( LogWriter.needsLogging && this instanceof SIPClientTransaction) { sipStack.getLogWriter().logMessage("fireTimer " + this + " retransmissionTicks " + retransmissionTimerTicksLeft); } if (timeoutTimerTicksLeft !... | 3364 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3364/68c0ca844a7d5fe4a7744cbf9898184966ce0680/SIPTransaction.java/clean/src/gov/nist/javax/sip/stack/SIPTransaction.java | [
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System.out.println (" " + info.getName() + " [" + clientMap.get(cNum) +"]"); | String cName = (String)clientMap.get(cNum); System.out.println (" " + info.getName() + " [" + cName +"]"); if (cName.indexOf("UM-1") != -1) selectedInfo = info; | public static void main(String[] args) { MidiDevice.Info[] infos = MidiSystem.getMidiDeviceInfo(); if (infos.length == 0) { System.out.println( "No MIDI devices found. Exiting." ); System.exit(1); } /* Find ALSA MIDI ports */ List midiports = new ArrayList(); for(int i = 0; i<infos.length... | 48962 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48962/cfc37b1ed16aaed9b1f0a7a66c786506fba602cb/Qualm.java/clean/Qualm.java | [
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return _asString.hashCode(); | return _calendar.hashCode(); | public int hashCode() { return _asString.hashCode(); } | 45757 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45757/112ea299458389f727394c555992fbb42954ddee/Date.java/buggy/src/java-common/org/xins/common/types/standard/Date.java | [
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Assertions.assertTrue( variableContract.getValue("user.home").equals("/home/userprogram")); | Assertions.assertTrue( variableContract.getValue("user.home").equals(System.getProperty("user.home"))); | public void action() throws Exception { VariableContract variableContract= new VariableContract(); //Setting from Program HashMap map = new HashMap(); map.put("user.home", "/home/userprogram"); variableContract.setVariableFromProgram(map, VariableContractType.getType(ProActiveDescriptorConstants.VARIABLES_JAV... | 14315 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/14315/91fcb54dcad7ac2c8c4cc89a2761dbf8a4a96ee2/Test.java/clean/src/nonregressiontest/descriptor/variablecontract/javapropertiesProgram/Test.java | [
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Iterator i = parse( "A anA; int x = c; class A {}; A * anotherA = &anA; int b;", false ).getDeclarations(); | Iterator i = parse( "A anA; int x = c; class A {}; A * anotherA = &anA; int b;", false ).getDeclarations(); | public void testErrorHandling_1() throws Exception { Iterator i = parse( "A anA; int x = c; class A {}; A * anotherA = &anA; int b;", false ).getDeclarations(); IASTVariable x = (IASTVariable)i.next(); assertEquals( x.getName(), "x"); IASTClassSpecifier A = (IASTClassSpecifier)((IASTAbstractTypeSpecifierDeclaratio... | 54911 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54911/3a6ffef8f855652606f74a14d4b15478c81e5db4/CompleteParseASTTest.java/clean/core/org.eclipse.cdt.core.tests/parser/org/eclipse/cdt/core/parser/tests/CompleteParseASTTest.java | [
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if(!WellFormednessUtils.isWellFormed(expression)){ | if(!(expression.getROperand() != null)){ | public void visitBinaryExpression(@NotNull PsiBinaryExpression expression){ super.visitBinaryExpression(expression); if(!WellFormednessUtils.isWellFormed(expression)){ return; } if(!ComparisonUtils.isEqualityComparison(expression)){ retur... | 56598 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56598/10dfc0821a579a6a0ff949a64d378572f57a4625/IncompatibleMaskInspection.java/buggy/plugins/InspectionGadgets/src/com/siyeh/ig/bitwise/IncompatibleMaskInspection.java | [
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stub._put(WSSHandlerConstants.INFLOW_SECURITY, inflowConfig.getProperty()); | stub._getClientOptions().setProperty(WSSHandlerConstants.INFLOW_SECURITY, inflowConfig.getProperty()); | public void invokeWithGivenConfig(String clientRepo, String url, OutflowConfiguration outflowConfig, InflowConfiguration inflowConfig) throws Exception { TicketType ticket = TicketType.Factory.newInstance(); ticket.setId("My ticket Id"); Ping ping = Ping.Factory.newInstance(); ping.setTe... | 49300 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49300/e2e08d1472bc0bded7bc6bf6d30dcb53fa25bf5e/InteropScenarioClient.java/buggy/modules/security/interop/org/apache/axis2/security/InteropScenarioClient.java | [
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public static final JobEntryLoader getInstance() | public static final JobEntryLoader getInstance(String pluginDirectory[]) | public static final JobEntryLoader getInstance() { if (jobEntryLoader!=null) return jobEntryLoader; jobEntryLoader = new JobEntryLoader( new String[] { Const.PLUGIN_JOBENTRIES_DIRECTORY_PUBLIC, Const.PLUGIN_JOBENTRIES_DIRECTORY_PRIVATE } ); return jobEntryLoader; } | 58146 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58146/90d1bb3006f4994f15681525054baace2e7e4d8b/JobEntryLoader.java/buggy/kettle/src/be/ibridge/kettle/job/JobEntryLoader.java | [
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time += cal.get(Calendar.MILLISECOND) * 300 / 1000; | time += Math.round(cal.get(Calendar.MILLISECOND) * 300f / 1000); | private static void putDateTimeValue(RequestStream out, Object value) throws IOException { int daysSince1900; int time; if (value == null) { out.write((byte) 0); return; } synchronized (cal) { out.write((byte) 8); cal.setTime((java.ut... | 439 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/439/934d3f73f62b99f71d8f48ffbb2d02bb406aa576/TdsData.java/buggy/trunk/jtds/src/main/net/sourceforge/jtds/jdbc/TdsData.java | [
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throw (Throwable)t; | throw (Throwable) t; | public PyObject _jcallexc(Object[] args) throws Throwable { PyObject[] pargs = new PyObject[args.length]; try { int n = args.length; for (int i=0; i<n; i++) pargs[i] = Py.java2py(args[i]); return __call__(pargs); } catch (PyException e) { ... | 6527 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6527/f1a14fc2e5b8633379ef5db31fa9e36925099543/PyObject.java/clean/org/python/core/PyObject.java | [
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public boolean eIsSet( EStructuralFeature eFeature ) | public boolean eIsSet( int featureID ) | public boolean eIsSet( EStructuralFeature eFeature ) { switch ( eDerivedStructuralFeatureID( eFeature ) ) { case ModelPackage.DIAL_CHART__VERSION : return isSetVersion( ); case ModelPackage.DIAL_CHART__TYPE : return TYPE_EDEFAULT == null ? type != null : !TYPE_EDEFAULT.equals( type ); case ModelPack... | 15160 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/15160/036e8c78765730b146e5854b9d6c397a296fed86/DialChartImpl.java/clean/chart/org.eclipse.birt.chart.engine/src/org/eclipse/birt/chart/model/impl/DialChartImpl.java | [
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assertNull( sink ); | assertNotNull( sink ); | public void testAttach() throws Exception { final MockObjectSource source = new MockObjectSource( 15 ); final LeftInputAdapterNode liaNode = new LeftInputAdapterNode( 1, source ); final Field field = ObjectSource.class.getDec... | 6736 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6736/bb3b37a32ee8885caf989363d622839eccaf39d1/LeftInputAdapterNodeTest.java/buggy/drools-core/src/test/java/org/drools/reteoo/LeftInputAdapterNodeTest.java | [
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public void write_octet_array(byte[] value, int offset, int length) { | public void write_octet_array(byte[] value, int offset, int length) { | public void write_octet_array(byte[] value, int offset, int length) { write_align(1, length); System.arraycopy(value, offset, _buffer, _offset, length); _offset += length; } | 12474 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12474/9d2c39c906c6955e17daf4ac239b85d4727ddc83/CdrOutputStream.java/buggy/modules/interop/src/java/org/apache/geronimo/interop/rmi/iiop/CdrOutputStream.java | [
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Dimension d = getImageBounds(base).getSize(); d.width *= scale; d.height *= scale; | MediaTracker tracker = new MediaTracker(this); if(base.getWidth(null) == -1 || base.getHeight(null) == -1) { tracker.addImage(base,0); try { tracker.waitForID(0); } catch (InterruptedException e) { e.printStackTrace(); } tracker.removeImage(base); } int width = (int)(base.getWidth( null ) * scale); int height = (int)(b... | private Image getScaledImage(Image base) { if (base == null) { return null; } if ( zoomIndex == BASE_ZOOM_INDEX ) { return base; } Image scaled = scaledImageCache.get(base); if (scaled == null) { Dimension d = getImageBounds(base).ge... | 4135 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4135/05380d6b223ff7ae7763b7dc01ea128a53f559a2/BoardView1.java/buggy/megamek/src/megamek/client/ui/AWT/BoardView1.java | [
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initRecent(); | initRecent(); GUIUtilities.advanceProgress(); | public static void main(String[] args) { // Parse command line boolean endOpts = false; boolean readOnly = false; boolean reuseView = false; settingsDirectory = MiscUtilities.constructPath( System.getProperty("user.home"),".jedit"); String portFile = "server"; boolean defaultSession = true; session = "defaul... | 6564 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/6564/f069d2ff351bbe01259f5df8f7a594a981c218e6/jEdit.java/clean/org/gjt/sp/jedit/jEdit.java | [
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cookie.setMaxAge(validDays * 24 * 60 * 60); | cookie.setMaxAge(validHours * 60 * 60); | public static Cookie createCookie(final String cookieName, final String cookieValue, final int validDays) { /* Validate parameters. */ if (cookieName == null || cookieName.equals("")) { throw new IllegalArgumentException("cookieName must be a non-empty string."); } if (cookieV... | 1637 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1637/ddac9d650f74ce3b6836f2052872fd989387bbdc/RequestUtil.java/clean/moria2/modules/moria-web/src/java/no/feide/moria/servlet/RequestUtil.java | [
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public void insertAttribute ( String localName ) { if (preCheck()) { _cur._locale.enter(); try { _insertAttribute( localName ); } finally { _cur._locale.exit(); } } else synchronized ( _cur._locale ) { _cur._locale.enter(); try { _insertAttribute( localName ); } finally { _cur._locale.exit(); } } } | public void insertAttribute(String localName) { if (preCheck()) { _cur._locale.enter(); try { _insertAttribute(localName); } finally { _cur._locale.exit(); } } else synchronized (_cur._locale) { _cur._locale.enter(); try { _insertAttribute(localName); } finally { _cur._locale.exit(); } } } | public void insertAttribute ( String localName ) { if (preCheck()) { _cur._locale.enter(); try { _insertAttribute( localName ); } finally { _cur._locale.exit(); } } else synchronized ( _cur._locale ) { _cur._locale.enter(); try { _insertAttribute( localName ); } finally { _cur._locale.exit(); } } } | 3520 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3520/8883179236b87db476131da6fa70580fac43da83/Cursor.java/clean/src/newstore2/org/apache/xmlbeans/impl/newstore2/Cursor.java | [
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System.arraycopy((new ZipShort(getUserId())).getBytes(), 0, data, 6, 2); System.arraycopy((new ZipShort(getGroupId())).getBytes(), 0, data, 8, 2); | System.arraycopy( ( new ZipShort( getUserId() ) ).getBytes(), 0, data, 6, 2 ); System.arraycopy( ( new ZipShort( getGroupId() ) ).getBytes(), 0, data, 8, 2 ); | public byte[] getLocalFileDataData() { // CRC will be added later byte[] data = new byte[getLocalFileDataLength().getValue() - 4]; System.arraycopy((new ZipShort(getMode())).getBytes(), 0, data, 0, 2); byte[] linkArray = getLinkedFile().getBytes(); System.arraycopy((new ZipLong(li... | 10884 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10884/8348e0b29d34f62b8f140a99598373fb0cbf7fcb/AsiExtraField.java/buggy/src/main/java/org/codehaus/plexus/archiver/zip/AsiExtraField.java | [
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throw new PSQLException("postgresql.con.misc", pgStream.ReceiveString(encoding)); | throw new PSQLException("postgresql.con.misc", PSQLState.CONNECTION_REJECTED, pgStream.ReceiveString(encoding)); | private void openConnectionV3(String p_host, int p_port, Properties p_info, String p_database, String p_url, Driver p_d, String p_password) throws SQLException { PGProtocolVersionMajor = 3; if (Driver.logDebug) Driver.debug("Using Protocol Version3"); // Now we need to construct and send an ssl startup packet ... | 46312 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46312/0378a269f3ab3c44e67b14f96414b6ca95263263/AbstractJdbc1Connection.java/buggy/src/interfaces/jdbc/org/postgresql/jdbc1/AbstractJdbc1Connection.java | [
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if (fContentType == null || fRules == null) | if (fContentType == null || fRules == null) { if (resume) fOffset= fPartitionOffset; | public IToken nextToken() { if (fContentType == null || fRules == null) return super.nextToken(); fTokenOffset= fOffset; fColumn= UNDEFINED; boolean resume= (fPartitionOffset < fOffset); IPredicateRule rule; IToken token; for (int i= 0; i < fRules.length; i++) { rule= (IPredicateRule) fRules[i]; ... | 55805 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55805/dae691b2264e050f5207c17f85c0984110c69f33/RuleBasedPartitionScanner.java/buggy/bundles/org.eclipse.ui/Eclipse JFace Text/org/eclipse/jface/text/rules/RuleBasedPartitionScanner.java | [
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dropTable("#t0017"); | dropTable("#t0017"); | public void testDatatypes0017() throws Exception { Connection cx = getConnection(); Statement stmt = cx.createStatement(); dropTable("#t0017"); /* remove ( ), convert , to _ myXXXX, mynullXXXX // Insert a row without nulls via a Statement // Insert a row with nulls via a Statement // Insert a row without null... | 5753 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5753/d456535dc5bca0bbf54c0b9c6730e782aa275787/TimestampTest.java/clean/src.old/test/freetds/TimestampTest.java | [
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java.util.TreeMap ent = (TreeMap) itr.next(); | SnmpTableEntry ent = (SnmpTableEntry) itr.next(); | public static void main(String[] a) throws UnknownHostException { //String localhost = "127.0.0.1"; String localhost = "10.3.2.216"; InetAddress ip = InetAddress.getByName(localhost); SnmpAgentConfig peer = new SnmpAgentConfig(ip); SnmpCollection snmpCollector = new SnmpCollection(peer); snmpCollector.run(); ja... | 11849 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/11849/f3e13aa5f29f79fb74c5975bb7cf59814d4d4cb1/SnmpCollection.java/clean/opennms-services/src/main/java/org/opennms/netmgt/linkd/SnmpCollection.java | [
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if (scope.equals(ON_SELECTED_ONLY)) | } if (scope.equals(ON_SELECTED_ONLY)) { | private int getScopeValue(IConfigurationElement element) { String scope = element.getAttribute(SCOPE); if (scope == null) return -1; if (scope.equals(ON_ANY)) return MarkerFilter.ON_ANY; if (scope.equals(ON_SELECTED_ONLY)) return MarkerFilter.ON_SELECTED_ONLY; if (scope.equals(ON_SELECTED_AND_CHILDREN)) r... | 55805 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55805/e38d295ea613cf9f08aadb93a84a33d2e91abc5f/MarkerSupportRegistry.java/clean/bundles/org.eclipse.ui.ide/src/org/eclipse/ui/views/markers/internal/MarkerSupportRegistry.java | [
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case BOND : if (!stereoGiven) bondStereo.addElement(""); break; case MOLECULE : storeData(); cdo.endObject("Frame"); cdo.endObject("Molecule"); break; | case BOND : if (!stereoGiven) bondStereo.addElement(""); break; case MOLECULE : storeData(); cdo.endObject("Frame"); cdo.endObject("Molecule"); break; case COORDINATE3: if (BUILTIN.equals("xyz3")) { logger.debug("New coord3 xyz3 found: " + currentChars); try { StringTokenizer st = new StringTokenizer(currentChars); x3.... | public void endElement(String uri, String local, String raw) { String name = raw; logger.debug("EndElement"); setCurrentElement(name); BUILTIN = ""; switch (CurrentElement) { case BOND : if (!stereoGiven) bondStereo.addElement(""); break; case MOLECULE : storeData(); cdo.endObject("Frame"); cdo.... | 45254 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45254/8f9b8d4786fbeb6ba3b5913f1e5c5a9ebf157701/Convention.java/clean/org/openscience/cdk/io/cml/Convention.java | [
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public BrowserMenuBar(final Browser browser) { | public BrowserMenuBar(final Browser browser, final Boolean maximized) { | public BrowserMenuBar(final Browser browser) { super(); this.browser = browser; this.localization = new JFrameLocalization("BrowserWindow.Menu"); this.popupItemFactory = PopupItemFactory.getInstance(); this.resizer = new Resizer(browser, this, Boolean.TRUE, Resizer.ResizeE... | 53635 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/53635/5df2e6a8f48a4687ecb1808669030ad1f9cc6e45/BrowserMenuBar.java/buggy/client-ui/src/main/java/com/thinkparity/ophelia/browser/application/browser/BrowserMenuBar.java | [
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public IStatus run(IProgressMonitor monitor) { try { monitor.beginTask(LABEL_SYNCHRONIZE_TASK, repositoryTasks.size()); setProperty(IProgressConstants.ICON_PROPERTY, TaskListImages.REPOSITORY_SYNCHRONIZE); for (AbstractRepositoryTask repositoryTask : repositoryTasks) { if (monitor.isCanceled()) throw new... | 51151 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51151/d5ac49cfa9b03216cd984a4823cace7a63fded8b/SynchronizeTaskJob.java/buggy/org.eclipse.mylyn.tasks.ui/src/org/eclipse/mylyn/provisional/tasklist/SynchronizeTaskJob.java | [
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unsetCRef(); | popCRef(); | public void postExecuteUnder() { popFrame(); popRubyClass(); unsetCRef(); } | 45827 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45827/805d73b7462174e9e5c095eed22a09140bb79b5e/ThreadContext.java/clean/src/org/jruby/runtime/ThreadContext.java | [
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Modifier result = targetAst.newModifier(Modifier.ModifierKeyword.PUBLIC_KEYWORD); if (parented) { TypeDeclaration pd = targetAst.newTypeDeclaration(); pd.modifiers().add(result); } return result; | Type result = targetAst.newSimpleType(targetAst.newSimpleName("foo")); if (parented) { targetAst.newArrayType(result); | public ASTNode sample(AST targetAst, boolean parented) { Modifier result = targetAst.newModifier(Modifier.ModifierKeyword.PUBLIC_KEYWORD); if (parented) { TypeDeclaration pd = targetAst.newTypeDeclaration(); pd.modifiers().add(result); } return result; } | 10698 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/10698/0e6d4fe5469565f21baa2fd0ec88d178818c619b/ASTTest.java/buggy/org.eclipse.jdt.core.tests.model/src/org/eclipse/jdt/core/tests/dom/ASTTest.java | [
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print("int i, count = -1;\n"); | print("int i;\n"); | private void printCircularWorkHeader() { print("{\n"); if (filter.getPeekInt() > 0) { print("int i, count = -1;\n"); if (filter instanceof SIRTwoStageFilter) printCircularTwoStageInitWork(); else { int buffersize = nextPow2(filter.getPeekInt()); print ("#define BUFFERSIZE " + buffersize + "\n");... | 47772 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47772/f3a49ff86c6e264213cc9a62388ec04976e6414e/FlatIRToC.java/buggy/streams/src/at/dms/kjc/raw/FlatIRToC.java | [
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configuration = new Configuration("localhost", 7856); configurationContents = configuration.getConfiguration(); | protected void setUp() throws Exception { super.setUp(); getTestContext().setBaseUrl("http://localhost:7854"); configuration = new Configuration("localhost", 7856); configurationContents = configuration.getConfiguration(); } | 52149 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52149/3fa7363651b69ef3895466771838fa22a79e4de5/ProjectConfigurationPageWebTest.java/buggy/webtest/net/sourceforge/cruisecontrol/ProjectConfigurationPageWebTest.java | [
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complexContentChild, PROCESSING_ALL); | complexContentChild, PROCESSING_ALL_GP); | private void processComplexContent(int typeNameIndex, Element complexContentChild, ComplexTypeInfo typeInfo, QName baseName, boolean isMixed) throws Exception { Element attrNode = null; int index=-2; String typeName = fStringPool.toString(typeNameIndex); if (compl... | 1831 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1831/1813e417969028dc870714c567e13675903bd993/TraverseSchema.java/clean/src/org/apache/xerces/validators/schema/TraverseSchema.java | [
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return new Vector(periodsToDate( evaluator, evaluator.getCube().getQuarterLevel(), getMemberArg(evaluator, args, 0, false))); | Level level = getLevelArg(evaluator, args, 0, false); Member member = getMemberArg(evaluator, args, 1, false); return new Vector(periodsToDate(evaluator, level, member)); | public Object evaluate(Evaluator evaluator, Exp[] args) { return new Vector(periodsToDate( evaluator, evaluator.getCube().getQuarterLevel(), getMemberArg(evaluator, args, 0, false))); } | 4891 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4891/b51b7f4f6bfd44a884afd7801c1f0f8b9351674c/BuiltinFunTable.java/buggy/src/main/mondrian/olap/fun/BuiltinFunTable.java | [
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char last = pattern.charAt(length - 1); if (pattern.indexOf('*') != -1 || pattern.indexOf('?') != -1) { matchKind = R_PATTERN_MATCH; switch (last) { case END_SYMBOL: fPattern = pattern.substring(0, length - 1); break; case BLANK: fPattern = pattern.trim(); break; case ANY_STRING: fPattern = pattern; break; default: fP... | private void initializePatternAndMatchKind(String pattern) { int length = pattern.length(); if (length == 0) { matchKind = R_EXACT_MATCH; fPattern = pattern; return; } char last = pattern.charAt(length - 1); if (pattern.indexOf('*') != -1 || pattern.indexOf('?') != -1) { matchKind = R_PATTERN_MATCH; switch (last) ... | 58148 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58148/ea0718e0ea8d8a7b8c1c9d464be2b2219d8be426/SearchPattern.java/clean/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/dialogs/SearchPattern.java | [
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if (selections.size() == 0) | if (selections.size() == 0) { | public void run() { Iterator keyIterator = items.keySet().iterator(); //Update the store before the hierarchy to prevent updating parents before all of the children are done while (keyIterator.hasNext()) { ... | 55805 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55805/e38d295ea613cf9f08aadb93a84a33d2e91abc5f/CheckboxTreeAndListGroup.java/clean/bundles/org.eclipse.ui.ide/src/org/eclipse/ui/internal/ide/misc/CheckboxTreeAndListGroup.java | [
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if (count == Short.MAX_VALUE) { | if (nextCount == Short.MAX_VALUE) { | public UID() { synchronized (lock) { if (count == Short.MAX_VALUE) { long newtime; for (;;) { newtime = System.currentTimeMillis(); if (newtime - baseTime > 1000) { break; } try { Thread.sleep(1000); } catch (InterruptedException _) { } } baseTime = newtime; nextCount = Short.MIN... | 1056 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1056/50dc6879c9be89f646fdff68c58f785e3dc0b90e/UID.java/clean/core/src/classpath/java/java/rmi/server/UID.java | [
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new NoViableAltException("900:2: fact_expression[String id] returns [BaseDescr pd] : ( ( '(' fact_expression_in_paren[id] ')' )=> '(' fe= fact_expression_in_paren[id] ')' | f= fact );", 28, 0, input); | new NoViableAltException("900:2: fact_expression[String id] returns [BaseDescr pd] : ( ( '(' fact_expression_in_paren[id] ')' )=> '(' fe= fact_expression_in_paren[id] ')' | f= fact );", 27, 0, input); | public BaseDescr fact_expression(String id) throws RecognitionException { BaseDescr pd = null; BaseDescr fe = null; BaseDescr f = null; pd = null; boolean multi = false; try { // D:\\workspace\\jboss\\jbossrules\\drools-compiler\\src\\m... | 31577 /local/tlutelli/issta_data/temp/all_java3context/java/2006_temp/2006/31577/afea9f80e7c11e7b76df18f232d3b5ca5ad21e72/DRLParser.java/clean/drools-compiler/src/main/java/org/drools/lang/DRLParser.java | [
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{ if (active) throw new IllegalStateException ("already parsing"); if (getProperty (propertyId) != value) filter.setProperty (propertyId, value); } | { if (active) { throw new IllegalStateException("already parsing"); } if (getProperty(propertyId) != value) { filter.setProperty(propertyId, value); } } | public void setProperty (String propertyId, Object value) throws SAXNotRecognizedException, SAXNotSupportedException { if (active) throw new IllegalStateException ("already parsing"); if (getProperty (propertyId) != value) filter.setProperty (propertyId, value); } | 27835 /local/tlutelli/issta_data/temp/all_java2context/java/2006_temp/2006/27835/7fb7568e63c3fe14af521de4699cb37898923ca7/XmlReader.java/buggy/libjava/gnu/xml/aelfred2/XmlReader.java | [
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public EntityResolver2Wrapper(EntityResolver2 entityResolver) { setEntityResolver(entityResolver); } | public EntityResolver2Wrapper() {} | public EntityResolver2Wrapper(EntityResolver2 entityResolver) { setEntityResolver(entityResolver); } // <init>(EntityResolver2) | 46079 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46079/c7c7140fbc0baf115a90871a337515ebc33c7265/EntityResolver2Wrapper.java/buggy/src/org/apache/xerces/util/EntityResolver2Wrapper.java | [
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return getWorksiteManager().getUserSites(); | return getWorksiteManager().getUserSites(null, siteTypes); | public List getObjects() { return getWorksiteManager().getUserSites(); } | 48996 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48996/54d36f1be956f33b2e355a545b0bfddc7871ea55/WorksiteListGenerator.java/buggy/common/api-impl/src/java/org/theospi/portfolio/worksite/mgt/impl/WorksiteListGenerator.java | [
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jPanel1.add(jUploading, new GridBagConstraints(1, 0, 1, 1, 0.0, 0.0 | jContentPanel.add(jUploading, new GridBagConstraints(1, 0, 1, 1, 0.0, 0.0 | private void jbInit() { this.setDefaultCloseOperation(WindowConstants.DO_NOTHING_ON_CLOSE); this.getContentPane().add(jPanel1, BorderLayout.CENTER); jPanel1.setLayout(new GridBagLayout()); jComputer1.setIcon(GalleryRemote.iComputer); jComputer2.setIcon(GalleryRemote.iComputer); jUploading.setIcon(GalleryRemote.i... | 9402 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/9402/85fcb80ab7b07a38400646288f4ba103a8ec961b/UploadProgress.java/clean/com/gallery/GalleryRemote/UploadProgress.java | [
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logger.info("Filter " + thisFilter.getInternalName() + " returned for " + lastWord + " has field " + thisField + "\n"); | logger.info( "Filter " + thisFilter.getInternalName() + " returned for " + lastWord + " has field " + thisField + "\n"); | public void SetModeForLine(String currentCommand) { if (lastLine == null || !(lastLine.equals(currentCommand))) { if (currentCommand.indexOf(DESCRIBE) >= 0) SetDescribeMode(); else if (currentCommand.indexOf(HELP) >= 0) SetHelpMode(); else if (currentCommand.indexOf(USE) >= 0) SetDatasetMode(); else ... | 2000 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/2000/a7fdb0c76c1e35ce769ae06a1fa50dbd342639d8/MartCompleter.java/clean/src/java/org/ensembl/mart/shell/MartCompleter.java | [
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RubyFrame frame = getRuby().getRubyFrame(); frame.push(); frame.setLastFunc(id); frame.setLastClass(noSuper ? null : this); frame.setSelf(recv); frame.setArgs(args); | RubyFrame frame = getRuby().getRubyFrame(); frame.push(); frame.setLastFunc(id); frame.setLastClass(noSuper ? null : this); frame.setSelf(recv); frame.setArgs(args); | public RubyObject call0( RubyObject recv, RubyId id, RubyPointer args, Node body, boolean noSuper) { // ... if (getRuby().getIter().getIter() == RubyIter.ITER_PRE) { getRuby().getIter().push(RubyIter.ITER_CUR); } else { getRuby().getIter().push(RubyIter.ITER_NOT); } RubyFrame frame = getRuby().getRubyFra... | 48072 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48072/0a7181933af700ea8025a4197f3a5ebcc08333c3/RubyModule.java/clean/org/jruby/RubyModule.java | [
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if (resourcesToExport == null) totalWork = countChildrenOf(resource); else totalWork = countSelectedResources(); | if (resourcesToExport == null) { totalWork = countChildrenOf(resource); } else { totalWork = countSelectedResources(); } | public void run(IProgressMonitor progressMonitor) throws InvocationTargetException, InterruptedException { this.monitor = progressMonitor; try { initialize(); } catch (IOException e) { throw new InvocationTargetException(e, NLS.bind(DataTransferMessages.ZipExpor... | 55805 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55805/e38d295ea613cf9f08aadb93a84a33d2e91abc5f/ArchiveFileExportOperation.java/clean/bundles/org.eclipse.ui.ide/src/org/eclipse/ui/internal/wizards/datatransfer/ArchiveFileExportOperation.java | [
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private void parse_gAMA_chunk(PNGChunk chunk) { // If an sRGB chunk exists, ignore gAMA chunks if (sRGBRenderingIntent != -1) { return; } fileGamma = chunk.getInt4(0)/100000.0F; float exp = performGammaCorrection ? displayExponent/userExponent : 1.0F; ... | 46680 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46680/4d3a99ba25df78f76a0cd7a624ef8aca67e45c6d/PNGRed.java/clean/sources/org/apache/batik/ext/awt/image/codec/PNGRed.java | [
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return new CommandCvsHandler(com.intellij.CvsBundle.message("operation.name.import"), new ImportOperation(details), FileSetToBeUpdated.EMTPY); | return new CommandCvsHandler(CvsBundle.message("operation.name.import"), new ImportOperation(details), FileSetToBeUpdated.EMTPY); | public static CvsHandler createImportHandler(ImportDetails details) { return new CommandCvsHandler(com.intellij.CvsBundle.message("operation.name.import"), new ImportOperation(details), FileSetToBeUpdated.EMTPY); } | 12814 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12814/056c036c52b28c619268f3abf50617cf57f28824/CommandCvsHandler.java/clean/plugins/cvs2/source/com/intellij/cvsSupport2/cvshandlers/CommandCvsHandler.java | [
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warn("Bond: order " + s.trim()); | logger.debug("Bond: order " + s.trim()); | public void characterData (char ch[], int start, int length) { // warn("CD"); String s = toString(ch, start, length).trim(); switch (CurrentElement) { case STRING : warn("Builtin: " + BUILTIN); if (BUILTIN.equals("elementType")) { warn("Element: " + s.trim()); elsym.addElement(s); } else if (BUILTIN.... | 45254 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45254/e04a2bbd6afdac34488441c1ce22ad5f73d254ff/Convention.java/clean/org/openscience/cdk/io/cml/Convention.java | [
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Upgrader upgrader = new Upgrader(); XMLOutputter outputter = new XMLOutputter(); try { assertEquals(modset, outputter.outputString(upgrader.findModificationSet(buildFileElement))); assertEquals(modset, outputter.outputString(upgrader.findModificationSet(buildFileElement2))); } catch (CruiseControlException e) { e.print... | SAXBuilder builder = new SAXBuilder("org.apache.xerces.parsers.SAXParser"); buildFileElement = builder.build(new StringReader(xml)).getRootElement(); buildFileElement2 = builder.build(new StringReader(xml2)).getRootElement(); buildFileElement3 = builder.build(new StringReader(xml3)).getRootElement(); | public void testFindModificationSet() { String xml = "<project><taskdef name=\"modset\" classname=\"net.sourceforge.cruisecontrol.ModificationSet\"/><target><modset quietperiod=\"15\"><element att1=\"value1\" /></modset></target></project>"; String xml2 = "<project><target><taskdef name=\"modset\" cl... | 52149 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52149/e6d55c9fadaa09c2852e7534c83941d93ecaf05b/UpgraderTest.java/clean/main/test/net/sourceforge/cruisecontrol/util/UpgraderTest.java | [
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for (closeWin = false ; !closeWin ; ) { | for (this.closeWin = false ; !this.closeWin ; ) { | public String askForAnIndexURI(Hsqldb db) { frame = new JFrame(I18n.getMessage("thaw.plugin.index.selectIndex")); frame.setVisible(false); upPanel = new JPanel(); Logger.info(this, "indexes"); localIndexes = new IndexTree(I18n.getMessage("thaw.plugin.index.yourIndexes"), true, true, null, db); otherIndexes = new... | 47012 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47012/88402a3bc59123261d50a7cfed0ac20de2b772f6/IndexSelecter.java/buggy/src/thaw/plugins/index/IndexSelecter.java | [
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getUniLoc(uniformVar.name), | getUniLoc(uniformVar), | public void apply() { if (isSupported()) { if (isEnabled()) { if (programID != -1) { // Apply the shader... ARBShaderObjects.glUseProgramObjectARB(programID); // Assign uniforms... if (!uniforms.isEmpty()) {... | 19503 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/19503/659e52f5de42957aa9f2bf22a2d6fac9a3f6dc0b/LWJGLShaderObjectsState.java/clean/src/com/jme/scene/state/lwjgl/LWJGLShaderObjectsState.java | [
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public SkeletonMismatchException(String s) { super(s); } | public SkeletonMismatchException(String s) { super(s); } | public SkeletonMismatchException(String s) { super(s);} | 47947 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47947/a3f60f71365174676e1302f0b201f5772849ffd3/SkeletonMismatchException.java/clean/java/rmi/server/SkeletonMismatchException.java | [
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jj_la1_1 = new int[] {0x0,0x0,0x0,0x2e1c00,0x2e1c00,0x2e1c00,0x0,0x10,0xf,0x20,0x80000,0x7fc00,0x600000,0x80000,0x61c00,0x0,0xf8000000,0x0,0x0,0x600000,0x600000,0x0,0x8,0x7,0x40000,0x3fc00,0x40000,0x21c00,0x0,0xf8000000,}; | jj_la1_1 = new int[] {0x0,0x0,0x0,0x2e1c00,0x2e1c00,0x2e1c00,0x0,0xf,0x20,0x7fc00,0x600000,0x61c00,0xf8000000,0x0,0x0,0x600000,0x600000,0x0,0x8,0x40000,0x0,0x8,0x7,0x40000,0x3fc00,0x40000,0x21c00,0x0,0xf8000000,}; | private static void jj_la1_1() { jj_la1_1 = new int[] {0x0,0x0,0x0,0x2e1c00,0x2e1c00,0x2e1c00,0x0,0x10,0xf,0x20,0x80000,0x7fc00,0x600000,0x80000,0x61c00,0x0,0xf8000000,0x0,0x0,0x600000,0x600000,0x0,0x8,0x7,0x40000,0x3fc00,0x40000,0x21c00,0x0,0xf8000000,}; } | 7954 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7954/726c24ef410f918a103c7ce911931e76cc280894/ExpressionParser.java/clean/aspectwerkz4/src/main/org/codehaus/aspectwerkz/expression/ast/ExpressionParser.java | [
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s.defaultReadObject(); String key = (String) s.readObject(); | s.defaultReadObject(); String key = (String) s.readObject(); | private void readObject(ObjectInputStream s) throws ClassNotFoundException, IOException { s.defaultReadObject(); String key = (String) s.readObject(); while (key != null) { Object listener = s.readObject(); if ("componentL".equals(key)) addComponentListener((ComponentListener) listener); else i... | 1056 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/1056/566e4ab93ebc97794094572536829e581d565b11/Component.java/buggy/core/src/classpath/java/java/awt/Component.java | [
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return scalar ? convertToScalar(exp) : exp; | return scalar ? convertToScalar(resolved) : resolved; | public Exp validate(Exp exp, boolean scalar) { if (!resolvedNodes.add(exp)) { // Expression has already been resolved. return scalar ? convertToScalar(exp) : exp; } stack.push(exp); try { Exp resolved = exp.accept(this); ... | 4891 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/4891/741b8f38514a4115aaffc6385b4687db63fe334b/Query.java/buggy/src/main/mondrian/olap/Query.java | [
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return StateMachinesHelper.getHelper().getSource((MTransition) edge); | return StateMachinesHelper.getHelper() .getSource((MTransition) edge); | public Object getSourcePort(Object edge) { if (edge instanceof MTransition) { return StateMachinesHelper.getHelper().getSource((MTransition) edge); } cat.debug("TODO getSourcePort of MTransition"); return null; } | 7166 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/7166/23464f9cbc3169e9d2f1919998cae2c59b514985/StateDiagramGraphModel.java/buggy/src_new/org/argouml/uml/diagram/state/StateDiagramGraphModel.java | [
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String ref = (String)ctx.getHeaders().get("Referer"); if(ref!=null) buf.append("<br><a href=\""+ref+"\" title=\"Back\" Back</a>\n"); else buf.append("<br><a href=\"javascript:back()\" title=\"Back\">Back</a>\n"); | ctx.getPageMaker().makeBackLink(buf,ctx); | public void handlePost(URI uri, Bucket data, ToadletContext ctx) throws ToadletContextClosedException, IOException { if(data.size() > 1024*1024) { this.writeReply(ctx, 400, "text/plain", "Too big", "Data exceeds 1MB limit"); return; } HTTPRequest request = new HTTPRequest(uri,data,ctx); if(request==null) r... | 50493 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50493/043d0a52b75a79205f6af6f536a20a7db87fd08b/WelcomeToadlet.java/clean/src/freenet/clients/http/WelcomeToadlet.java | [
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private void importZipResource(ZipInputStream zipStreamIn, String importPath, boolean noSubFolder) throws Exception { boolean isFolder = false; boolean exit = false; int j, r, stop, charsRead, size; int entries = 0; int totalBytes = 0; int offset = 0; byte[] buffer =... | 51784 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51784/ffc41838b2d111ebeb91e9a4f240187165ad24d5/CmsImportFolder.java/buggy/src/org/opencms/db/CmsImportFolder.java | [
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if (c == '\\') if (! ((i + 5) < length) && (s.charAt(i + 1) == 'u') && isXDigit(s.charAt(i + 2)) && isXDigit(s.charAt(i + 3)) && isXDigit(s.charAt(i + 4)) && isXDigit(s.charAt(i + 5))) | if (c == '\\') if (! ((i + 5) < length) && (s.charAt(i + 1) == 'u') && 0 <= xDigitToInt(s.charAt(i + 2)) && 0 <= xDigitToInt(s.charAt(i + 3)) && 0 <= xDigitToInt(s.charAt(i + 4)) && 0 <= xDigitToInt(s.charAt(i + 5))) | protected static boolean isJSIdentifier(String s) { int length = s.length(); if (length == 0 || !Character.isJavaIdentifierStart(s.charAt(0))) return false; for (int i=1; i<length; i++) { char c = s.charAt(i); if (!Character.isJavaIdentifierPart(c)) if (c == '\\') ... | 12904 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12904/889deca9d42b29b8f50dd401225c3d441fb89da3/TokenStream.java/buggy/js/rhino/src/org/mozilla/javascript/TokenStream.java | [
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AST __t778 = _t; | AST __t763 = _t; | public final void forstate(AST _t) throws RecognitionException { AST forstate_AST_in = (_t == ASTNULL) ? null : (AST)_t; AST f = null; AST __t778 = _t; f = _t==ASTNULL ? null :(AST)_t; match(_t,FOR); _t = _t.getFirstChild(); if ( inputState.guessing==0 ) { action.blockBegin(f); action.frameBlockCh... | 13952 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13952/daa15e07422d3491bbbb4d0060450c81983332a4/TreeParser01.java/buggy/trunk/org.prorefactor.core/src/org/prorefactor/treeparser01/TreeParser01.java | [
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assertTrue("incorrect sign", result.signum() == -1); | assertEquals("incorrect sign", -1, result.signum()); | public void testSetBitLeftmostNegative() { byte aBytes[] = {1, -128, 56, 100, -15, 35, 26}; int aSign = -1; int number = 48; byte rBytes[] = {-1, 127, -57, -101, 14, -36, -26, 49}; BigInteger aNumber = new BigInteger(aSign, aBytes); BigInteger result = aNumber.setBit(number... | 54769 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54769/2de6e235697acde9baa71a0268d4d3752d10bdf6/BigIntegerOperateBitsTest.java/buggy/modules/math/src/test/java/org/apache/harmony/tests/java/math/BigIntegerOperateBitsTest.java | [
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HTMLNode priorityForm = priorityCell.addChild("form", new String[] { "action", "method" }, new String[] { "/queue/", "post" }); | HTMLNode priorityForm = priorityCell.addChild("form", new String[] { "action", "method", "enctype", "encoding" }, new String[] { "/queue/", "post", "UTF-8", "multipart/form-data" }); | private HTMLNode createPriorityCell(PageMaker pageMaker, String identifier, short priorityClass) { HTMLNode priorityCell = new HTMLNode("td", "class", "request-priority nowrap"); HTMLNode priorityForm = priorityCell.addChild("form", new String[] { "action", "method" }, new String[] { "/queue/", "post" }); priorityF... | 49933 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49933/0d8d196255a0e85fa26937433ceabd0ce4f72943/QueueToadlet.java/clean/src/freenet/clients/http/QueueToadlet.java | [
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return null; | if (portletBufferedReader != null) return portletBufferedReader; if (portletInputStream != null) throw new IllegalStateException("getReader() cannot be called if getPortletInputStream() already called"); String encoding = getCharacterEncoding(); if (encoding == null) encoding = "iso-8859-1"; portletBufferedRead... | public BufferedReader getReader() throws UnsupportedEncodingException, IOException { return null; } | 57229 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57229/ae1d0661cd6881846f830d97929a07c4ee98d979/ActionRequestImpl.java/clean/src/java/org/orbeon/oxf/portlet/ActionRequestImpl.java | [
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status + " " + getPeer()+" "+myName+" "+currentLocation.getValue()+" "+getVersion()+" backoff: "+routingBackoffLength+" ("+(Math.max(routingBackedOffUntil - System.currentTimeMillis(),0))+")"; | (isConnected ? "CONNECTED " : "DISCONNECTED") + " " + getPeer()+" "+myName+" "+currentLocation.getValue()+" "+getVersion()+" backoff: "+routingBackoffLength+" ("+(Math.max(routingBackedOffUntil - System.currentTimeMillis(),0))+")"; | public String getStatus() { String status; if(isReallyConnected()) status = new String("CONNECTED"); else if(isConnected()) status = new String("INCOMPATIBLE"); else status = new String("DISCONNECTED"); return status + " " + getPeer()+" "+myName+" "+currentLocatio... | 52909 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52909/f18d01b1fb86ddf4053d90e1f337f99ccd2ec255/PeerNode.java/clean/src/freenet/node/PeerNode.java | [
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setRow(((Integer)newValue).intValue()); | setRow(((Integer) newValue).intValue()); | public void eSet(EStructuralFeature eFeature, Object newValue) { switch (eDerivedStructuralFeatureID(eFeature)) { case LayoutPackage.TITLE_BLOCK__CHILDREN: getChildren().clear(); getChildren().addAll((Collection)newValue); return; c... | 46013 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/46013/e5c78f0e8317166d02fa384e14c3dd7aa1796f2c/TitleBlockImpl.java/buggy/chart/org.eclipse.birt.chart.engine/src/org/eclipse/birt/chart/model/layout/impl/TitleBlockImpl.java | [
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if (VM.VerifyAssertions) VM.assert(isLoaded()); | if (VM.VerifyAssertions) VM._assert(isLoaded()); | final VM_Class[] getSubClasses() throws VM_PragmaUninterruptible { if (VM.VerifyAssertions) VM.assert(isLoaded()); return subClasses; } | 49871 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/49871/f852e312fd5d6396bdeff809dda7a5e06d3d3bed/VM_Class.java/clean/rvm/src/vm/classLoader/VM_Class.java | [
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Result result = runQuery( "with member [Measures].[Store Profit Rate] as '([Measures].[Store Sales]-[Measures].[Store Cost])/[Measures].[Store Cost]', format = '#.00%'" + nl + "select" + nl + " {[Measures].[Store Cost],[Measures].[Store Sales],[Measures].[Store Profit Rate]} on columns," + nl + " Order([Product].[Pro... | runQueryCheckResult(sampleQueries[5]); | public void testSample5() { Result result = runQuery( "with member [Measures].[Store Profit Rate] as '([Measures].[Store Sales]-[Measures].[Store Cost])/[Measures].[Store Cost]', format = '#.00%'" + nl + "select" + nl + " {[Measures].[Store Cost],[Measures].[Store Sales],[Measures].[Store Profit Rate]} on c... | 51263 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51263/7509e0f25235fd2cb529aabfa3408833d5f3a58b/FoodMartTestCase.java/buggy/src/main/mondrian/test/FoodMartTestCase.java | [
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} else { | } else { | private PresentationObject doUpdate(IWContext iwc, TariffGroup group) throws java.rmi.RemoteException ,FinderException{ //Map mapOfIndices = Finder.mapOfIndicesByTypes(Finder.listOfTypeGroupedIndices()); Map mapOfIndices = getFinanceService().mapOfTariffIndicesByTypes(); int tariffCount = Integer.parseInt(iwc.getP... | 57001 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57001/33e5c85ca31478329116ab80b95fd07320394530/TariffEditor.java/clean/src/java/com/idega/block/finance/presentation/TariffEditor.java | [
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case ARRAYLIT: return "ARRAYLIT"; case OBJLIT: return "OBJLIT"; | public static String name(int token) { if (printNames) { switch (token) { case ERROR: return "ERROR"; case EOF: return "EOF"; case EOL: return "EOL"; case POPV: return "POPV"; ... | 19000 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/19000/6d458931ee3299fbfab0e9840614ad9b93413dd4/Token.java/clean/src/org/mozilla/javascript/Token.java | [
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CmsDbContext dbc = m_dbContextFactory.getDbContext(context); | CmsDbContext dbc = m_dbContextFactory.getDbContext(context); | public void resetPassword(CmsRequestContext context, String username, String oldPassword, String newPassword) throws CmsException, CmsSecurityException { CmsDbContext dbc = m_dbContextFactory.getDbContext(context); try { m_driverManager.resetPassword(dbc, username, oldPassword, newPas... | 51784 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51784/a7ffa3c192d7068f584b0a3a844b88bdb2d3145a/CmsSecurityManager.java/buggy/src/org/opencms/db/CmsSecurityManager.java | [
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new Label( cSetting, SWT.NONE ).setText( Messages.getString( "FormatNumberPreferencePage.symbolPosition.label" ) ); | new Label( cSetting, SWT.NONE ).setText( LABEL_SYMBOL_POSITION ); | private Composite getCurrencyPage( Composite parent ) { if ( currencyPage == null ) { currencyPage = new Composite( parent, SWT.NULL ); currencyPage.setLayout( new GridLayout( 1, false ) ); Group cSetting = new Group( currencyPage, SWT.NONE ); cSetting.setText( Messages.getString( "FormatNumberPreferencePage... | 15160 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/15160/ed52f1732ec1c1eef0fd79e44d2e45f78973153a/FormatNumberPage.java/clean/UI/org.eclipse.birt.report.designer.ui/src/org/eclipse/birt/report/designer/internal/ui/dialogs/FormatNumberPage.java | [
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case 23: | case 23: /* reduce AIdValOrSid */ | public Start parse() throws ParserException, LexerException, IOException { push(0, null); List ign = null; while(true) { while(index(lexer.peek()) == -1) { if(ign == null) { ign = new TypedLinkedList(NodeCast.insta... | 50059 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50059/a343b73e05abe516d42c4d6672f63a8325be4a98/Parser.java/buggy/sub/source/net/sourceforge/texlipse/bibparser/parser/Parser.java | [
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/** * Run the runnable as an asyncExec. * * @param runnable */ private void runAsync(Runnable runnable) { Shell currentShell = getShell(); if (currentShell == null || currentShell.isDisposed()) return; currentShell.getDisplay().asyncExec(runnable); } | private IProgressMonitorWithBlocking getBlockingProgressMonitor() { return new IProgressMonitorWithBlocking() { /** * Run the runnable as an asyncExec. * * @param runnable */ private void runAsync(Runnable runnable) { Shell currentShell = getShell(); if (currentShell == null || currentShell.isD... | 58148 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/58148/011a48b8ec747a10e36868931da0ff7e7880bf98/ProgressMonitorFocusJobDialog.java/clean/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/progress/ProgressMonitorFocusJobDialog.java | [
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private void importResource( | private CmsResource importResource( | private void importResource( String source, String destination, String type, String user, String group, String access, long lastmodified, Map properties, String launcherStartClass, Vector writtenFilenames, Vector fileCodes ) {... | 51784 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/51784/d3e3de3a0825215c4681bbdf431c4c579b548527/CmsImport.java/buggy/src/com/opencms/file/CmsImport.java | [
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} else result.add(aStatus); | } else { result.add(aStatus); } | protected static List flatten(IStatus aStatus) { List result = new ArrayList(); if (aStatus.isMultiStatus()) { IStatus[] children = aStatus.getChildren(); for (int i = 0; i < children.length; i++) { IStatus currentChild = children[i]; if (currentChil... | 56152 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/56152/e38d295ea613cf9f08aadb93a84a33d2e91abc5f/StatusUtil.java/buggy/bundles/org.eclipse.ui.ide/src/org/eclipse/ui/internal/ide/StatusUtil.java | [
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super.setProperty(o, name, value); | super.setProperty(comp, name, value); | public void setProperty(Object o, String name, String value) { STextArea c = (STextArea)o; if ( name.equals("COLS") ) c.setColumns(Integer.parseInt(value)); else if ( name.equals("ROWS") ) c.setRows(Integer.parseInt(value)); else super.setProperty(o, name... | 3911 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/3911/ebd6930dd9efb2a999e05f9084a09053efc0db36/STextAreaPropertyManager.java/clean/wings/src/org/wings/template/STextAreaPropertyManager.java | [
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RubyFixnum.newFixnum(runtime, IOModes.EXCL)); | runtime.newFixnum(IOModes.EXCL)); | public static RubyClass createFileClass(Ruby runtime) { RubyClass fileClass = runtime.defineClass("File", runtime.getClasses().getIoClass()); RubyString separator = RubyString.newString(runtime, separator()); separator.freeze(); fileClass.defineConstant("SEPARATOR", separ... | 47134 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/47134/870e1da9b41bfdbae259e1fc5f18fc8b76686998/RubyFile.java/clean/src/org/jruby/RubyFile.java | [
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setOnchange(null); | private void evaluateExpressions() throws JspException { try { setAccesskey((String) evalAttr("accessKey", getAccesskey(), String.class)); } catch (NullAttributeException ex) { setAccesskey(null); } try { setAlt((... | 48068 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/48068/db064e19656421b94aaf753550935d95f44bd5f9/ELRadioTag.java/buggy/contrib/struts-el/src/share/org/apache/strutsel/taglib/html/ELRadioTag.java | [
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JavaScriptViewer( ) | JavaScriptViewer( Composite parent, int style ) | JavaScriptViewer( ) { final PluginSettings ps = PluginSettings.instance( ); try { idr = ps.getDevice( "dv.SWT" );//$NON-NLS-1$ } catch ( ChartException pex ) { logger.log( pex ); } cm = ScriptCharts.createChart_Axis( ); } | 12803 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/12803/ef9ad0cebcee59b4b447430acdbf2355afecf441/JavaScriptViewer.java/buggy/chart/org.eclipse.birt.chart.examples/src/org/eclipse/birt/chart/examples/api/script/JavaScriptViewer.java | [
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shapeLayerProps.put("shapeFile", "edu/sc/seis/fissuresUtil/data/maps/dcwpo-browse.shp"); shapeLayerProps.put("spatialIndex", "edu/sc/seis/fissuresUtil/data/maps/dcwpo-browse.ssx"); | shapeLayerProps.put("shapeFile", "edu/sc/seis/vsnexplorer/data/maps/dcwpo-browse.shp"); shapeLayerProps.put("spatialIndex", "edu/sc/seis/vsnexplorer/data/maps/dcwpo-browse.ssx"); | public OpenMap(EventTableModel etm, ListSelectionModel lsm){ try{ mapHandler = new MapHandler(); mapHandler.add(this); // Create a MapBean mapBean = new MapBean(); //get the projection and set its background color and center point Proj proj = new CADRG(new LatLonPoint(mapBean.DEFAULT_CENTER_LAT, mapBea... | 52623 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52623/65f98e737cf60cfb8d708e1da14adde3175de7d0/OpenMap.java/clean/src/edu/sc/seis/fissuresUtil/map/OpenMap.java | [
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formData.setCategoryTypeToEdit(categoryTypeToEdit); formData.setCategoryToEdit(categoryToEdit1); formData.setDocumentsOfOneCategory(documentsOfOneCategory); | formData.setCategoryTypeToEdit( categoryTypeToEdit ); formData.setCategoryToEdit( categoryToEdit1 ); formData.setDocumentsOfOneCategory( documentsOfOneCategory ); | private void deleteCategory(CategoryDomainObject categoryToEdit, IMCServiceInterface service, HttpServletRequest req, CategoryTypeDomainObject categoryTypeToEdit, FormData formData) { CategoryDomainObject categoryToEdit1 = categoryToEdit; StringBuffer msg = new StringBuffer(""); String[] docume... | 8781 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/8781/8daae426d68b0b35f1c6a010bf9e8f05942fe712/AdminCategories.java/buggy/server/src/com/imcode/imcms/servlet/superadmin/AdminCategories.java | [
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if ((!exiting) && (keyTimeout > System.currentTimeMillis())) { listener.failOverInProgress(); reconnecting = true; try { Thread.sleep(connWaitMS); } catch (InterruptedException e) { } connect(umanager); } else { connected = false; listener.disconnected(); } | if ((!exiting) && (keyTimeout > System.currentTimeMillis())) { listener.failOverInProgress(); reconnecting = true; try { Thread.sleep(connWaitMS); } catch (InterruptedException e) { } connect(umanager); } else { connected = false; listener.disconnected(); } | public void disconnected() { if (connected == false) { // not yet connected if (connAttemptCounter < connAttempts) { // try again try { Thread.sleep(connWaitMS); } catch (InterruptedException e) { e.printStackTrace(); ... | 55380 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/55380/20099edd8aca08cc31e94e748a04d1f1a7e558ee/ClientConnectionManagerImpl.java/clean/src/com/sun/gi/comm/users/client/impl/ClientConnectionManagerImpl.java | [
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xformsControls.rebuildCurrentControlsState(pipelineContext); xformsControls.getCurrentControlsState().visitControlInfoFollowRepeats(pipelineContext, xformsControls, new XFormsControls.ControlInfoVisitorListener() { public void startVisitControl(XFormsControls.ControlInfo controlInfo) { if (controlInfo instanceof XF... | public void runAction(final PipelineContext pipelineContext, String targetId, XFormsEventHandlerContainer eventHandlerContainer, Element actionElement, ActionContext actionContext) { // Check that we understand the action element final String actionNamespaceURI = actionElement.getNamespaceURI(); ... | 54445 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54445/fedf9c6e89ac7805c8f9d6c2e0a7c44094259d0f/XFormsActionInterpreter.java/clean/src/java/org/orbeon/oxf/xforms/action/XFormsActionInterpreter.java | [
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if ((p=project.getProperty("ant.netrexxc.suppressDeprecation"))!=null) { this.suppressDeprecation=Project.toBoolean(p); | if ((p = project.getProperty("ant.netrexxc.suppressDeprecation")) != null) { this.suppressDeprecation = Project.toBoolean(p); | public void init() { String p; if ((p=project.getProperty("ant.netrexxc.binary"))!=null) { this.binary=Project.toBoolean(p); } // classpath makes no sense if ((p=project.getProperty("ant.netrexxc.comments"))!=null) { this.comments=Project.toBoolean(p); ... | 17033 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/17033/c7b5b643b25b20f5c96097b2c54e2e26a054f212/NetRexxC.java/buggy/src/main/org/apache/tools/ant/taskdefs/optional/NetRexxC.java | [
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MutableTreeNode node = tree.treeAgent.createNewNode(name, 0); tree.treeAgent.addContainerNode((AgentTree.ContainerNode)node,"FIPACONTAINER",addr); | tree.treeAgent.addContainerNode(name, addr); | public void addContainer(final String name, final InetAddress addr) { Runnable addIt = new Runnable() { public void run() { MutableTreeNode node = tree.treeAgent.createNewNode(name, 0); tree.treeAgent.addContainerNode((AgentTree.ContainerNode)node,"FIPACONTAINER",addr); containerNames.add(name);... | 5505 /local/tlutelli/issta_data/temp/all_java0context/java/2006_temp/2006/5505/85403d3055632c199ddf5bc8ab1884237c9ca7e0/MainWindow.java/buggy/src/jade/tools/rma/MainWindow.java | [
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private void createFontList(Composite firstColumn) { Font font = firstColumn.getFont(); Composite parent = new Composite(firstColumn, SWT.NULL); GridLayout layout = new GridLayout(); layout.marginWidth = 0; layout.marginHeight = 0; parent.setLayout(layout); GridData data = new GridData(GridData.FILL_BOTH); ... | 57470 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57470/1bba6e68027322eb4457204fdeda19454e06701c/FontPreferencePage.java/clean/bundles/org.eclipse.ui.workbench/Eclipse UI/org/eclipse/ui/internal/dialogs/FontPreferencePage.java | [
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assertTrue("the property value returned for keyTest was not correct", Security.getProperty("keyTest").equals( "permission to set property")); | assertEquals("the property value returned for keyTest was not correct", "permission to set property", Security.getProperty("keyTest")); | public void test_setPropertyLjava_lang_StringLjava_lang_String() { // Test for method void // java.security.Security.setProperty(java.lang.String, // java.lang.String) Security.setProperty("keyTest", "permission to set property"); assertTrue("the property value returned for keyTest was not correct", Security.g... | 54769 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54769/6ea88de4900c210afcf8547ad5a91899abec9801/SecurityTest.java/clean/modules/security/src/test/java/common/tests/api/java/security/SecurityTest.java | [
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message = new String(data); | messageString = new String(data); | public boolean read(ByteBuffer buffer) throws MessageParseException { for (;;) { try { if (state == SEEKING_HEADER) { if (buffer.remaining() < headerBytes.length) { break; } // TODO PERFORMANCE this can ... | 52211 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52211/3e49a041b7e90f63143c57eb6023671affc3fd0c/FIXMessageData.java/clean/src/quickfix/netty/FIXMessageData.java | [
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.newInstance(); | .newInstance(); | private static void buildParseTree() { try { String name="/grendel/renderer/tools"; // Get a File object for the package String s=Renderer.class.getResource(name).getFile(); s=s.replace("%20", " "); File directory=new File(s); System.out.println("dir: "+directory.toString()); if... | 13991 /local/tlutelli/issta_data/temp/all_java1context/java/2006_temp/2006/13991/b13c667b376deb4a8f2c235ffd847b57616d23c4/Renderer.java/buggy/grendel/sources/grendel/renderer/Renderer.java | [
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f[0] = new Field(connection, "TYPE_NAME", iVarcharOid, NAME_SIZE); f[1] = new Field(connection, "DATA_TYPE", iInt2Oid, 2); f[2] = new Field(connection, "PRECISION", iInt4Oid, 4); f[3] = new Field(connection, "LITERAL_PREFIX", iVarcharOid, NAME_SIZE); f[4] = new Field(connection, "LITERAL_SUFFIX", iVarcharOid, NAME_SIZE... | Field f[] = new Field[18]; ResultSet r; Vector v = new Vector(); | public java.sql.ResultSet getTypeInfo() throws SQLException { java.sql.ResultSet rs = connection.ExecSQL("select typname from pg_type"); if (rs != null) { Field f[] = new Field[18]; ResultSet r; // ResultSet for the SQL query that we need to do Vector v = new Vector(); // The new ResultSet tuple stuff f[0]... | 45534 /local/tlutelli/issta_data/temp/all_java4context/java/2006_temp/2006/45534/7c553901d7ab010ad1cb5bf44f9ca2fdae83909a/AbstractJdbc1DatabaseMetaData.java/clean/src/interfaces/jdbc/org/postgresql/jdbc1/AbstractJdbc1DatabaseMetaData.java | [
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digester.addCallMethod("employee", "setActive", 1, new Class[] {Boolean.class}); | digester.addCallMethod("employee", "setActive", 1, new Class[] {boolean.class}); | public void testCallMethod2() throws Exception { //I was preparing this test case to fix another bug // i'll uncomment it once i've fixed it // Configure the digester as required digester.addObjectCreate("employee", Employee.class); // try all syntax permuta... | 53914 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/53914/1c50b2e36b906ab55e88861cd7796fe9b8c1b4ee/RuleTestCase.java/buggy/src/test/org/apache/commons/digester/RuleTestCase.java | [
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