GP-GPT: Large Language Model for Gene-Phenotype Mapping
Paper • 2409.09825 • Published • 1
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Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
Gene SSX2IP is also know as <mask> <mask> <mask>
###... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
Gene LPAR3 is also know as <mask> <mask> <mask>
### ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
ID for gene SSX2IP is <mask> <mask> <mask>
### Outpu... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
ID for gene LPAR3 is <mask> <mask> <mask>
### Output... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene name for 117178 is <mask> <mask> <mask>
### Out... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene name for 117178 is <mask> <mask> <mask>
### Out... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene <mask> <mask> <mask> have variant in intergenicrelated w... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene SSX2IP have variant in <mask> <mask>related with 1-Alkyl... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene SSX2IP have variant in intergenicrelated with <mask> <m... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene <mask> <mask> <mask> have variant in intergenicrelated w... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene LPAR3 have variant in <mask> <mask>related with 1-Alkyl-... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene LPAR3 have variant in intergenicrelated with <mask> <mas... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
P_value of Gene <mask> <mask> <mask> and 1-Alkyl-2-acetylglyc... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
P_value of Gene SSX2IP and <mask> <mask> <mask> <mask> <mask>... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show <mask> <mask> <mask> <mask> <mask> <mask> <mask... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show 1-Alkyl-2-acetylglycerophosphocholine Esterase ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show 1-Alkyl-2-acetylglycerophosphocholine Esterase ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show <mask> <mask> <mask> <mask> <mask> <mask> <mask... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
Gene CELSR2 is also know as <mask> <mask> <mask>
###... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
Gene CELSR2 is also know as <mask> <mask> <mask>
###... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
ID for gene CELSR2 is <mask> <mask> <mask>
### Outpu... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
ID for gene CELSR2 is <mask> <mask> <mask>
### Outpu... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene name for 1952 is <mask> <mask> <mask>
### Outpu... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene name for 1952 is <mask> <mask> <mask>
### Outpu... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene <mask> <mask> <mask> have variant in UTR-3related with 1... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene CELSR2 have variant in <mask> <mask>related with 1-Alkyl... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene CELSR2 have variant in UTR-3related with <mask> <mask> ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene <mask> <mask> <mask> have variant in UTR-3related with 1... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene CELSR2 have variant in <mask> <mask>related with 1-Alkyl... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene CELSR2 have variant in UTR-3related with <mask> <mask> <... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
P_value of Gene <mask> <mask> <mask> and 1-Alkyl-2-acetylglyc... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
P_value of Gene CELSR2 and <mask> <mask> <mask> <mask> <mask>... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show <mask> <mask> <mask> <mask> <mask> <mask> <mask... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show 1-Alkyl-2-acetylglycerophosphocholine Esterase ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show 1-Alkyl-2-acetylglycerophosphocholine Esterase ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show <mask> <mask> <mask> <mask> <mask> <mask> <mask... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
Gene CELSR2 is also know as <mask> <mask> <mask>
###... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
Gene CELSR2 is also know as <mask> <mask> <mask>
###... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
ID for gene CELSR2 is <mask> <mask> <mask>
### Outpu... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
ID for gene CELSR2 is <mask> <mask> <mask>
### Outpu... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene name for 1952 is <mask> <mask> <mask>
### Outpu... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene name for 1952 is <mask> <mask> <mask>
### Outpu... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene <mask> <mask> <mask> have variant in UTR-3related with 1... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene CELSR2 have variant in <mask> <mask>related with 1-Alkyl... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene CELSR2 have variant in UTR-3related with <mask> <mask> ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene <mask> <mask> <mask> have variant in UTR-3related with 1... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene CELSR2 have variant in <mask> <mask>related with 1-Alkyl... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene CELSR2 have variant in UTR-3related with <mask> <mask> <... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
P_value of Gene <mask> <mask> <mask> and 1-Alkyl-2-acetylglyc... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
P_value of Gene CELSR2 and <mask> <mask> <mask> <mask> <mask>... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show <mask> <mask> <mask> <mask> <mask> <mask> <mask... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show 1-Alkyl-2-acetylglycerophosphocholine Esterase ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show 1-Alkyl-2-acetylglycerophosphocholine Esterase ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show <mask> <mask> <mask> <mask> <mask> <mask> <mask... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
Gene PSRC1 is also know as <mask> <mask> <mask>
### ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
Gene PSRC1 is also know as <mask> <mask> <mask>
### ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
ID for gene PSRC1 is <mask> <mask> <mask>
### Output... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
ID for gene PSRC1 is <mask> <mask> <mask>
### Output... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene name for 84722 is <mask> <mask> <mask>
### Outp... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene name for 84722 is <mask> <mask> <mask>
### Outp... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene <mask> <mask> <mask> have variant in nearGene-3related w... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene PSRC1 have variant in <mask> <mask>related with 1-Alkyl-... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene PSRC1 have variant in nearGene-3related with <mask> <ma... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene <mask> <mask> <mask> have variant in nearGene-3related w... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene PSRC1 have variant in <mask> <mask>related with 1-Alkyl-... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene PSRC1 have variant in nearGene-3related with <mask> <mas... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
P_value of Gene <mask> <mask> <mask> and 1-Alkyl-2-acetylglyc... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
P_value of Gene PSRC1 and <mask> <mask> <mask> <mask> <mask> ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show <mask> <mask> <mask> <mask> <mask> <mask> <mask... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show 1-Alkyl-2-acetylglycerophosphocholine Esterase ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show 1-Alkyl-2-acetylglycerophosphocholine Esterase ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show <mask> <mask> <mask> <mask> <mask> <mask> <mask... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
Gene MS4A4E is also know as <mask> <mask> <mask>
###... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
Gene MS4A4E is also know as <mask> <mask> <mask>
###... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
ID for gene MS4A4E is <mask> <mask> <mask>
### Outpu... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
ID for gene MS4A4E is <mask> <mask> <mask>
### Outpu... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene name for 643680 is <mask> <mask> <mask>
### Out... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene name for 643680 is <mask> <mask> <mask>
### Out... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene <mask> <mask> <mask> have variant in intronrelated with ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene MS4A4E have variant in <mask> <mask>related with 1-Alkyl... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene MS4A4E have variant in intronrelated with <mask> <mask>... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene <mask> <mask> <mask> have variant in intronrelated with ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene MS4A4E have variant in <mask> <mask>related with 1-Alkyl... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene MS4A4E have variant in intronrelated with <mask> <mask> ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
P_value of Gene <mask> <mask> <mask> and 1-Alkyl-2-acetylglyc... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
P_value of Gene MS4A4E and <mask> <mask> <mask> <mask> <mask>... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show <mask> <mask> <mask> <mask> <mask> <mask> <mask... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show 1-Alkyl-2-acetylglycerophosphocholine Esterase ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show 1-Alkyl-2-acetylglycerophosphocholine Esterase ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
evidence show <mask> <mask> <mask> <mask> <mask> <mask> <mask... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
Gene ZPR1 is also know as <mask> <mask> <mask>
### O... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
Gene ZPR1 is also know as <mask> <mask> <mask>
### O... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
ID for gene ZPR1 is <mask> <mask> <mask>
### Output:... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
ID for gene ZPR1 is <mask> <mask> <mask>
### Output:... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene name for 8882 is <mask> <mask> <mask>
### Outpu... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene name for 8882 is <mask> <mask> <mask>
### Outpu... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene <mask> <mask> <mask> have variant in intronrelated with ... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene ZPR1 have variant in <mask> <mask>related with 1-Alkyl-2... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene ZPR1 have variant in intronrelated with <mask> <mask> <... |
Below is an instruction that describes a task. Write a response that appropriately completes the request. ### Instruction:
you are bioinformatic expert, based on text, use correct words to fill out the masked part
### Input:
gene <mask> <mask> <mask> have variant in intronrelated with ... |
GP-GTP is an open-weight genetic-phenotype knowledge language model. For "medical-genetic-information".
Arvix version: arXiv:2409.09825
Collected and generated by rules. Not fully manually corrected. For general training purpose.
Folder s0 for Fill-mask task
Folder s1 for QA task
Please cite the arXiv version at arXiv:2409.09825