Datasets:
DBbun
/
oligotox-phase2-dataset

Dataset card Data Studio Files
xet
 Community
1
metric
stringclasses
27 values
status
stringclasses
3 values
table_name
stringlengths
7
51
value
stringlengths
1
162
control_present_in_oligos
warning_missing
oligos.csv
CTRL_CONTEXT_PS_LNA_ASO_INTERNALIZATION_LOW_TOX
control_present_in_oligos
warning_missing
oligos.csv
CTRL_NEG_ESCPLUS_SEED_DESTABILIZED_LOW_ALT
control_present_in_oligos
warning_missing
oligos.csv
CTRL_POS_ESC_PARENT_SEED_OFFTARGET_ALT
control_present_in_oligos
warning_missing
oligos.csv
CTRL_CONTEXT_LNA_PTTE_BACKBONE_ACTIVITY
control_present_in_oligos
warning_missing
oligos.csv
CTRL_CONTEXT_FXR_G0S2_DILI_RESCUE
control_present_in_oligos
warning_missing
oligos.csv
CTRL_POS_HIGH_AFFINITY_GAPMER_RNASEH1_LONG_PREMRNA_ALT
control_present_in_oligos
warning_missing
oligos.csv
CTRL_NEG_MOE_OR_RNASEH1_ATTENUATED_GAPMER
control_present_in_oligos
warning_missing
oligos.csv
CTRL_QC_FREE_ASO_PAYLOAD_LCMS_SPECIFICITY
control_present_in_oligos
warning_missing
oligos.csv
CTRL_CONTEXT_PUM1_EXOSOME_HSC_FIBROSIS_AXIS
human_relevant_assay_fraction
ok
assays.csv
0.5813
new_table
ok
ago1_lnp_aso_endothelial_liver_vascular_context.csv
4
source_added
ok
sources.csv
LIU_ENDOTHELIAL_AGO1_LNP_ASO_2025
controls_added
ok
controls.csv
4
preprint_caution
ok
ago1_lnp_aso_endothelial_liver_vascular_context.csv
preprint_supporting_context_not_definitive
new_table
ok
gys1_pompe_aso_srt_context.csv
4
source_added
ok
sources.csv
WEISS_GYS1_ASO_POMPE_PREPRINT_2024
controls_added
ok
controls.csv
4
preprint_caution
ok
gys1_pompe_aso_srt_context.csv
preprint_supporting_context_not_direct_hepatotoxicity
phase2_scoring_alignment
ok
gys1_pompe_aso_srt_context.csv
negative_controls_translatability_safety_monitoring_documentation
new_table
ok
cholangiocyte_cholestasis_recovery_context.csv
21
source_added
ok
sources.csv
OLSON_CHOLANGIOCYTE_CHOLESTASIS_2025
controls_added
ok
controls.csv
4
phase2_alignment
ok
cholangiocyte_cholestasis_recovery_context.csv
liver_endpoint_diversity_cholestasis_fibrosis_macrophage_translatability
figure_file_count
ok
figures
10
new_table
ok
pcdha11_amna_aso_hepatotoxicity.csv
35
source_added
ok
sources.csv
KANDA_PCDHA11_AMNA_ASO_2024
controls_added
ok
controls.csv
5
direct_hepatotoxicity_alignment
ok
pcdha11_amna_aso_hepatotoxicity.csv
dose_sequence_dependence_reversibility_AST_ALT_ALP_offtarget_controls
copyright_safety
ok
pcdha11_amna_aso_hepatotoxicity.csv
no_source_figures_tables_sequences_or_long_text_redistributed
new_table
ok
ps_aso_dna_damage_response.csv
27
new_table
ok
sirubicon_ros_galnac_mash_delivery.csv
11
source_added
ok
sources.csv
HJELMGREN_PS_ASO_DDR_2026
source_added
ok
sources.csv
LAN_SIRUBICON_ROS_GALNAC_MASH_2025
controls_added
ok
controls.csv
6
triage_decision
ok
uploaded_pdfs
added_2_modules_deferred_2_duplicate_1
copyright_safety
ok
all_tables
no_source_figures_tables_sequences_or_long_text_redistributed
new_table
ok
scpBNA2_aso_chemistry_safety.csv
28
new_table
ok
siCyp2e1_lnp_apap_aili.csv
17
new_table
ok
lipid_nanp_liver_cell_targeting.csv
15
fig05_redesign
ok
figures
compact_overview_negative_positive_context_panels
fig07_redesign
ok
figures
top_and_additional_modality_panels
triage_decision
ok
uploaded_pdfs
added_3_modules_deferred_2
deferred_source
ok
uploaded_pdfs
AUCHYNNIKAVA_FOLATE_MSNA_2025_deferred_delivery_biodistribution_context
deferred_source
ok
uploaded_pdfs
ZHANG_BERBERINE_GEFITINIB_DILI_2025_deferred_non_oligo_DILI_context
new_table
ok
rna_nanoparticle_hcc_multitarget.csv
14
new_table
ok
myc_asirna_dca_design_safety.csv
10
new_table
ok
multifunctional_hdo_delivery.csv
4
new_judging_criteria_table
ok
challenge_alignment_scorecard.csv
10
new_judging_criteria_table
ok
information_gap_map.csv
144
new_judging_criteria_table
ok
model_readiness_report.csv
15
triage_decision
ok
uploaded_pdfs
added_3_supporting_modules_deferred_2
deferred_source
ok
uploaded_pdfs
KUMAGAI_SCPBNA2_PURINE_SYNTHESIS_2025_deferred_because_direct_scpBNA2_hepatotoxicity_already_encoded
deferred_source
review_needed
uploaded_pdfs
BJD_BMP1_SHRNA_AAV_CCL4_FIBROSIS_CONTEXT_deferred_due_to_limited_text_extraction_quality
new_table
ok
agt_galnac_sirna_development_toxicology.csv
80
new_table
ok
cpg_odn_apap_macrophage_immunomodulation.csv
60
new_table
ok
erbb2_aptamer_pet_pk.csv
55
triage_decision
ok
uploaded_pdfs
added_3_modules_deferred_2_context_sources
deferred_source
ok
uploaded_pdfs
XI_HCC_CHROMATIN_DGAT1_SIRNA_2025_deferred_context_only
deferred_source
ok
uploaded_pdfs
LI_AIH_CERNA_NETWORK_2022_deferred_context_only
judging_alignment
ok
agt_galnac_sirna_development_toxicology.csv
directly_supports_ability_to_solve_feasibility_rigor_potential_impact
new_table
ok
brothers_aso_pna_toxicity_mitigation.csv
120
new_table
ok
apoc3_galnac_sirna_sar_safety.csv
160
new_table
ok
galnac_sirna_lcms_bioanalysis.csv
150
new_table
ok
oral_mir29a_liver_fibrosis_na.csv
120
triage_decision
ok
uploaded_pdfs
added_4_modules_deferred_1_context_source
deferred_source
ok
uploaded_pdfs
LU_GT_MULTI_SIRNA_HCC_2025_deferred_context_only
judging_alignment
ok
brothers_aso_pna_toxicity_mitigation.csv
directly_supports_ability_to_solve_feasibility_rigor_potential_impact
judging_alignment
ok
galnac_sirna_lcms_bioanalysis.csv
supports_transparency_reproducibility_and_measurement_rigor
new_table
ok
lnp_crispr_hao1_ph1_safety.csv
20
new_table
ok
ps_lna_hiv_aso_internalization_toxicity.csv
15
triage_decision
ok
uploaded_pdfs
added_2_modules_deferred_3_context_sources
deferred_source
ok
uploaded_pdfs
XU_FGF21_MAPK1_DAIRY_KETOSIS_SIRNA_2025_deferred_context_only
deferred_source
ok
uploaded_pdfs
ELGHAZZI_GENE_SILENCING_GI_GU_TUMORS_REVIEW_2025_deferred_review_only
deferred_source
ok
uploaded_pdfs
YANG_PIRNA_CANCER_DIAGNOSTIC_THERAPEUTIC_REVIEW_2026_deferred_review_only
judging_alignment
ok
lnp_crispr_hao1_ph1_safety.csv
supports_feasibility_rigor_transparency_liver_delivery_safety
judging_alignment
ok
ps_lna_hiv_aso_internalization_toxicity.csv
supports_ASO_chemistry_uptake_tolerability_context
new_table
ok
escplus_seed_pairing_safety_mechanism.csv
25
new_table
ok
lna_phosphothiotriester_splice_switching.csv
35
new_table
ok
fxr_jnk_g0s2_dili_context.csv
18
triage_decision
ok
uploaded_pdfs
added_3_modules_deferred_1_context_source_skipped_1_duplicate
duplicate_source
ok
uploaded_pdfs
gkac539_duplicate_of_SCHLEGEL_ESCPLUS_SEED_PAIRING_GALNAC_SIRNA_2022_not_counted_twice
deferred_source
ok
uploaded_pdfs
JEON_COP1_HCC_LIPID_STEMNESS_SIRNA_2026_deferred_context_only
judging_alignment
ok
escplus_seed_pairing_safety_mechanism.csv
directly_supports_ability_to_solve_potential_impact_rigor_transparency
judging_alignment
ok
lna_phosphothiotriester_splice_switching.csv
supports_chemistry_design_space_PS_reduction_backbone_alternatives
judging_alignment
ok
fxr_jnk_g0s2_dili_context.csv
supports_liver_pathway_mechanistic_covariates_ALT_AST_metabolic_disorder
new_table
ok
gapmer_rnaseh1_long_premrna_hepatotox.csv
6
new_table
ok
aoc_free_aso_payload_bioanalysis.csv
5
new_table
ok
pum1_exosome_masld_hsc_fibrosis.csv
6
triage_decision
ok
uploaded_pdfs
added_3_modules_deferred_2_context_sources
deferred_source
ok
uploaded_pdfs
ZHU_HMMR_HCC_4MU_SIRNA_2026_deferred_context_only
deferred_source
ok
uploaded_pdfs
GHOLIKHANI_APTAMER_BREAST_CANCER_REVIEW_2022_deferred_review_context_only
judging_alignment
ok
gapmer_rnaseh1_long_premrna_hepatotox.csv
directly_supports_ability_to_solve_feasibility_rigor_and_toxicity_mechanism_transparency
judging_alignment
ok
aoc_free_aso_payload_bioanalysis.csv
supports_transparency_reproducibility_PK_PD_measurement_quality_and_exposure_QC
judging_alignment
ok
pum1_exosome_masld_hsc_fibrosis.csv
supports_potential_impact_and_liver_fibrosis_lipotoxicity_context
new_table
ok
bepirovirsen_immunomodulation_alt.csv
6
new_table
ok
sna_aso_kidney_systemic_safety.csv
6
new_table
ok
polyamine_plnp_rna_delivery_safety.csv
6
triage_decision
ok
uploaded_pdfs
added_3_modules_deferred_2_context_sources
deferred_source
ok
uploaded_pdfs
TAKENOYA_GALP_HFD_LIVER_TRANSCRIPTOME_METABOLOME_2023_deferred_not_oligo_specific
deferred_source
ok
uploaded_pdfs
SHEVELEV_SIRNA_THERAPEUTICS_REVIEW_2025_deferred_review_only