BojanaBas/Mistral-7B-Instruct-v0.2-pqa-10
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Instruction: Is language a barrier to the use of preventive services?
Abstracts:
abstract_id: PUBMED:9276652
Is language a barrier to the use of preventive services? Objective: To isolate the effect of spoken language from financial barriers to care, we examined the relation of language to use of preventive services i... |
Instruction: Aging, health, and depressive symptoms: are women and men different?
Abstracts:
abstract_id: PUBMED:24533913
Comprehensive evaluation of androgen replacement therapy in aging Japanese men with late-onset hypogonadism. Objective: This study assessed the efficacy and safety of testosterone replacement thera... |
Instruction: Advanced pediatric myelodysplastic syndromes: can immunophenotypic characterization of blast cells be a diagnostic and prognostic tool?
Abstracts:
abstract_id: PUBMED:19061215
Advanced pediatric myelodysplastic syndromes: can immunophenotypic characterization of blast cells be a diagnostic and prognostic ... |
Instruction: Does a myelomeningocele sac compared to no sac result in decreased postnatal leg function following maternal fetal surgery for spina bifida aperta?
Abstracts:
abstract_id: PUBMED:17556822
Does a myelomeningocele sac compared to no sac result in decreased postnatal leg function following maternal fetal sur... |
Instruction: Does race influence age of diagnosis for children with developmental delay?
Abstracts:
abstract_id: PUBMED:21122725
Does race influence age of diagnosis for children with developmental delay? Background: Early identification of developmental delay is important for ensuring that children receive the early ... |
Instruction: A 50-g glucose challenge test: is there any diagnostic cut-off?
Abstracts:
abstract_id: PUBMED:29694252
The Effect of the 50 g Glucose Challenge Test on The Thiol/Disulfide Homeostasis in Pregnancy. Aim: A 50 g glucose challenge test (GCT) is recommended for screening all pregnant women for gestational di... |
Instruction: Maternal mortality: only 42 days?
Abstracts:
abstract_id: PUBMED:26279311
Review of the importance of nutrition during the first 1000 days: maternal nutritional status and its associations with fetal growth and birth, neonatal and infant outcomes among African women. Maternal nutritional status (MNS) is a... |
Instruction: Can patients with brain herniation on cranial computed tomography have a normal neurologic exam?
Abstracts:
abstract_id: PUBMED:19076104
Can patients with brain herniation on cranial computed tomography have a normal neurologic exam? Objectives: Herniation of the brain outside of its normal intracranial s... |
Instruction: Does patient health and hysterectomy status influence cervical cancer screening in older women?
Abstracts:
abstract_id: PUBMED:18784967
Does patient health and hysterectomy status influence cervical cancer screening in older women? Background: Decisions to screen older patients for cancer are complicated ... |
Instruction: Does breast size modify the association between mammographic density and breast cancer risk?
Abstracts:
abstract_id: PUBMED:18349279
Does breast size modify the association between mammographic density and breast cancer risk? Background: Both the absolute and the percent of mammographic density are strong... |
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Dataset description
The PQAref dataset is a dataset for fine-tuning large language models for referenced question-answering in biomedical domain.
The dataset contains 3 components:
- Instruction - question that is supposed to be answered
- Abstracts - set of 10 relevant abstracts retrieved from PubMed by an IR system. They contain the PubMed id, abstract title and the content of the abstract
- Answer - expected answer, with references in the form of PubMed IDs.
The dataset was created semi-automatically, utilizing questions available from PubMedQA dataset.
Paper
Bojana Bašaragin, Adela Ljajić, Darija Medvecki, Lorenzo Cassano, Miloš Košprdić, and Nikola Milošević. 2024. How do you know that? Teaching Generative Language Models to Reference Answers to Biomedical Questions. In Proceedings of the 23rd Workshop on Biomedical Natural Language Processing, pages 536–547, Bangkok, Thailand. Association for Computational Linguistics, DOI: 10.18653/v1/2024.bionlp-1.44, URL: https://aclanthology.org/2024.bionlp-1.44
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