UoS-HGIG/MIMIC
Text Generation • Updated • 3
IBD LLM Toolkit
IBD LLM-based Toolkit for structuring medical records
Note MIMIC report IBD patient fine-tuned weights. https://github.com/UoS-HGIG/IBD_LLM Reference: Application of Generative Artificial Intelligence to Utilise Unstructured Clinical Data for Acceleration of Inflammatory Bowel Disease Research. Alex Z Kadhim, Zachary Green, Iman Nazari, Jonathan Baker, Michael George, Ashley Heinson, Matt Stammers, Christopher M Kipps, R Mark Beattie, James J Ashton, Sarah Ennis. medRxiv 2025.03.07.25323569; doi: https://doi.org/10.1101/2025.03.07.25323569
HPO Mapper
💻3Find HPO terms and associated genes for a given pathological finding
Note Interactive HPO mapping tool for findings and regions. https://github.com/UoS-HGIG/IBD_LLM Reference: Application of Generative Artificial Intelligence to Utilise Unstructured Clinical Data for Acceleration of Inflammatory Bowel Disease Research. Alex Z Kadhim, Zachary Green, Iman Nazari, Jonathan Baker, Michael George, Ashley Heinson, Matt Stammers, Christopher M Kipps, R Mark Beattie, James J Ashton, Sarah Ennis. medRxiv 2025.03.07.25323569; doi: https://doi.org/10.1101/2025.03.07.25323569
meta-llama/Llama-3.1-8B-Instruct
Text Generation • 8B • Updated • 9.31M • • 5.73kNote Base Llama Model for MIMIC fine-tuned weights