Trying to resolve
Browse files- __pycache__/utilspp.cpython-312.pyc +0 -0
- app.py +1 -2
- requirements.txt +58 -141
- stldm/__pycache__/__init__.cpython-312.pyc +0 -0
- stldm/__pycache__/config.cpython-312.pyc +0 -0
- stldm/__pycache__/inference.cpython-312.pyc +0 -0
- stldm/__pycache__/modules.cpython-312.pyc +0 -0
- stldm/__pycache__/simvpv2.cpython-312.pyc +0 -0
- stldm/__pycache__/stldm.cpython-312.pyc +0 -0
- stldm/__pycache__/stldm_hf.cpython-312.pyc +0 -0
- stldm/__pycache__/stldm_spatial.cpython-312.pyc +0 -0
- stldm/__pycache__/submodules.cpython-312.pyc +0 -0
- stldm/stldm.py +9 -7
- stldm/stldm_hf.py +10 -7
- stldm/stldm_spatial.py +9 -7
- utilspp.py +9 -397
__pycache__/utilspp.cpython-312.pyc
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Binary file (9.05 kB). View file
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app.py
CHANGED
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@@ -4,8 +4,7 @@ import gradio as gr
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from stldm import InferenceHub
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from stldm.config import STLDM_HKO
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-
from
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from utilspp import gradio_visualize, gradio_gif
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def nowcasting(file, cfg_str, ensemble_no):
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# Model Setup
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from stldm import InferenceHub
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from stldm.config import STLDM_HKO
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from utilspp import resize, gradio_gif
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def nowcasting(file, cfg_str, ensemble_no):
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# Model Setup
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requirements.txt
CHANGED
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@@ -1,147 +1,64 @@
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attrs==25.4.0
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| 10 |
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babel==2.17.0
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| 11 |
-
beautifulsoup4==4.14.3
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| 12 |
-
bleach==6.2.0
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| 13 |
-
cachetools==5.3.2
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| 14 |
-
certifi==2023.11.17
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| 15 |
-
cffi==2.0.0
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| 16 |
-
charset-normalizer==3.3.2
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| 17 |
-
comm==0.2.3
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| 18 |
-
contourpy==1.3.0
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| 19 |
cycler==0.12.1
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| 20 |
-
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| 21 |
-
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| 22 |
-
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| 23 |
-
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| 24 |
-
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| 25 |
-
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| 26 |
-
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| 27 |
-
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| 28 |
-
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| 29 |
-
google-auth==2.23.4
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| 30 |
-
google-auth-oauthlib==0.4.6
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| 31 |
-
grpcio
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| 32 |
h11==0.16.0
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| 33 |
-
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| 34 |
httpcore==1.0.9
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| 35 |
httpx==0.28.1
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| 36 |
-
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| 37 |
-
|
| 38 |
-
importlib-metadata==6.8.0
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| 39 |
-
importlib_resources==6.5.2
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| 40 |
-
ipykernel==6.31.0
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| 41 |
-
ipython==8.18.1
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| 42 |
-
ipywidgets==8.1.8
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| 43 |
-
isoduration==20.11.0
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| 44 |
-
jedi==0.19.2
|
| 45 |
Jinja2==3.1.6
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| 46 |
-
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| 47 |
-
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| 48 |
-
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| 49 |
-
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| 50 |
-
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| 58 |
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| 59 |
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| 60 |
-
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| 61 |
-
jupyterlab_server==2.28.0
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| 62 |
-
jupyterlab_widgets==3.0.16
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| 63 |
-
kiwisolver==1.4.5
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| 64 |
-
lark==1.3.1
|
| 65 |
-
lpips==0.1.4
|
| 66 |
-
Markdown==3.5.1
|
| 67 |
-
MarkupSafe==2.1.3
|
| 68 |
-
matplotlib==3.9.4
|
| 69 |
-
matplotlib-inline==0.2.1
|
| 70 |
-
mistune==3.1.4
|
| 71 |
-
nbclient==0.10.2
|
| 72 |
-
nbconvert==7.16.6
|
| 73 |
-
nbformat==5.10.4
|
| 74 |
-
nest-asyncio==1.6.0
|
| 75 |
-
networkx==3.2.1
|
| 76 |
-
notebook==7.5.0
|
| 77 |
-
notebook_shim==0.2.4
|
| 78 |
-
numpy==1.24.4
|
| 79 |
-
oauthlib==3.2.2
|
| 80 |
-
omegaconf==2.3.0
|
| 81 |
-
opencv-python==4.8.0.74
|
| 82 |
-
overrides==7.7.0
|
| 83 |
-
packaging==23.2
|
| 84 |
-
pandas==1.4.3
|
| 85 |
-
pandocfilters==1.5.1
|
| 86 |
-
parso==0.8.5
|
| 87 |
-
pexpect==4.9.0
|
| 88 |
-
Pillow==10.1.0
|
| 89 |
-
platformdirs==4.4.0
|
| 90 |
-
prometheus_client==0.23.1
|
| 91 |
-
prompt_toolkit==3.0.52
|
| 92 |
-
protobuf==3.19.6
|
| 93 |
-
psutil==7.1.3
|
| 94 |
-
ptyprocess==0.7.0
|
| 95 |
-
pure_eval==0.2.3
|
| 96 |
-
pyasn1==0.5.1
|
| 97 |
-
pyasn1-modules==0.3.0
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| 98 |
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pycparser==2.23
|
| 99 |
Pygments==2.19.2
|
| 100 |
-
pyparsing==3.
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| 101 |
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python-dateutil==2.
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| 102 |
-
python-
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pytz==
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| 119 |
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| 120 |
-
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| 121 |
-
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| 122 |
-
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| 123 |
-
tensorboard==2.9.0
|
| 124 |
-
tensorboard-data-server==0.6.1
|
| 125 |
-
tensorboard-plugin-wit==1.8.1
|
| 126 |
-
terminado==0.18.1
|
| 127 |
-
threadpoolctl==3.2.0
|
| 128 |
-
tifffile==2023.9.26
|
| 129 |
-
tinycss2==1.4.0
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| 130 |
-
tomli==2.3.0
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| 131 |
-
torch==1.12.1+cu116
|
| 132 |
-
torchmetrics==0.11.0
|
| 133 |
-
torchvision==0.13.1+cu116
|
| 134 |
-
tornado==6.5.2
|
| 135 |
-
tqdm==4.66.1
|
| 136 |
-
traitlets==5.14.3
|
| 137 |
-
typing_extensions==4.8.0
|
| 138 |
-
tzdata==2025.2
|
| 139 |
-
uri-template==1.3.0
|
| 140 |
-
urllib3==2.1.0
|
| 141 |
-
wcwidth==0.2.14
|
| 142 |
-
webcolors==24.11.1
|
| 143 |
-
webencodings==0.5.1
|
| 144 |
-
websocket-client==1.9.0
|
| 145 |
-
Werkzeug==3.0.1
|
| 146 |
-
widgetsnbextension==4.0.15
|
| 147 |
-
zipp==3.17.0
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aiofiles==24.1.0
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| 2 |
+
annotated-doc==0.0.4
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annotated-types==0.7.0
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+
anyio==4.12.1
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+
brotli==1.2.0
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| 6 |
+
certifi==2026.1.4
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| 7 |
+
click==8.3.1
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| 8 |
+
contourpy==1.3.3
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| 9 |
cycler==0.12.1
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| 10 |
+
einops==0.8.2
|
| 11 |
+
fastapi==0.129.0
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| 12 |
+
ffmpy==1.0.0
|
| 13 |
+
filelock==3.24.3
|
| 14 |
+
fonttools==4.61.1
|
| 15 |
+
fsspec==2026.2.0
|
| 16 |
+
gradio==6.6.0
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| 17 |
+
gradio_client==2.1.0
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| 18 |
+
groovy==0.1.2
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| 19 |
h11==0.16.0
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| 20 |
+
hf-xet==1.2.0
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| 21 |
httpcore==1.0.9
|
| 22 |
httpx==0.28.1
|
| 23 |
+
huggingface_hub==1.4.1
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| 24 |
+
idna==3.11
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| 25 |
Jinja2==3.1.6
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| 26 |
+
kiwisolver==1.4.9
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| 27 |
+
markdown-it-py==4.0.0
|
| 28 |
+
MarkupSafe==3.0.3
|
| 29 |
+
matplotlib==3.10.8
|
| 30 |
+
mdurl==0.1.2
|
| 31 |
+
mpmath==1.3.0
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| 32 |
+
networkx==3.6.1
|
| 33 |
+
numpy==1.26.4
|
| 34 |
+
orjson==3.11.7
|
| 35 |
+
packaging==26.0
|
| 36 |
+
pandas==3.0.1
|
| 37 |
+
pillow==12.1.1
|
| 38 |
+
pydantic==2.12.5
|
| 39 |
+
pydantic_core==2.41.5
|
| 40 |
+
pydub==0.25.1
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|
| 41 |
Pygments==2.19.2
|
| 42 |
+
pyparsing==3.3.2
|
| 43 |
+
python-dateutil==2.9.0.post0
|
| 44 |
+
python-multipart==0.0.22
|
| 45 |
+
pytz==2025.2
|
| 46 |
+
PyYAML==6.0.3
|
| 47 |
+
rich==14.3.3
|
| 48 |
+
safehttpx==0.1.7
|
| 49 |
+
safetensors==0.7.0
|
| 50 |
+
SciencePlots @ git+https://github.com/garrettj403/SciencePlots@5521f3b8e6c2b15b174bbea82d6662e5bf2c0d7d
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| 51 |
+
semantic-version==2.10.0
|
| 52 |
+
setuptools==41.2.0
|
| 53 |
+
shellingham==1.5.4
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| 54 |
+
six==1.17.0
|
| 55 |
+
starlette==0.52.1
|
| 56 |
+
sympy==1.14.0
|
| 57 |
+
tomlkit==0.13.3
|
| 58 |
+
torch==2.2.0
|
| 59 |
+
tqdm==4.67.3
|
| 60 |
+
typer==0.24.0
|
| 61 |
+
typer-slim==0.24.0
|
| 62 |
+
typing-inspection==0.4.2
|
| 63 |
+
typing_extensions==4.15.0
|
| 64 |
+
uvicorn==0.41.0
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stldm/__pycache__/__init__.cpython-312.pyc
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stldm/__pycache__/config.cpython-312.pyc
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stldm/__pycache__/inference.cpython-312.pyc
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stldm/__pycache__/modules.cpython-312.pyc
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stldm/__pycache__/simvpv2.cpython-312.pyc
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stldm/__pycache__/stldm.cpython-312.pyc
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stldm/__pycache__/stldm_hf.cpython-312.pyc
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stldm/__pycache__/stldm_spatial.cpython-312.pyc
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stldm/__pycache__/submodules.cpython-312.pyc
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stldm/stldm.py
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@@ -1,8 +1,17 @@
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import torch, random
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from torch import nn
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from einops import rearrange
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from stldm.submodules import *
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| 7 |
class Down_Block(nn.Module):
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def __init__(self, in_ch, hid_ch, out_ch, time_dim, is_last, patch_size=None, num_groups=8, heads=4, dim_head=32):
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@@ -172,12 +181,6 @@ class LDM(nn.Module):
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| 173 |
return out
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| 175 |
-
# constants
|
| 176 |
-
from collections import namedtuple
|
| 177 |
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from torch.cuda.amp import autocast
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| 178 |
-
import torch.nn.functional as F
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| 179 |
-
from einops import reduce
|
| 180 |
-
from tqdm.auto import tqdm
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| 181 |
|
| 182 |
ModelPrediction = namedtuple('ModelPrediction', ['pred_noise', 'pred_x_start'])
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| 183 |
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@@ -583,7 +586,6 @@ class GaussianDiffusion(nn.Module):
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| 583 |
else:
|
| 584 |
return pred
|
| 585 |
|
| 586 |
-
from stldm.modules import SimVPV2_Model, VAE
|
| 587 |
def model_setup(model_config, print_info=False, cfg_str=None):
|
| 588 |
if print_info:
|
| 589 |
print('Setup the model with considering temporal attention be (BHW, T, C) ... ...')
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|
| 1 |
+
# constants
|
| 2 |
+
from collections import namedtuple
|
| 3 |
+
from torch.cuda.amp import autocast
|
| 4 |
+
import torch.nn.functional as F
|
| 5 |
+
from einops import reduce
|
| 6 |
+
from tqdm.auto import tqdm
|
| 7 |
+
|
| 8 |
import torch, random
|
| 9 |
from torch import nn
|
| 10 |
from einops import rearrange
|
| 11 |
|
| 12 |
from stldm.submodules import *
|
| 13 |
+
from stldm.modules import SimVPV2_Model, VAE
|
| 14 |
+
|
| 15 |
|
| 16 |
class Down_Block(nn.Module):
|
| 17 |
def __init__(self, in_ch, hid_ch, out_ch, time_dim, is_last, patch_size=None, num_groups=8, heads=4, dim_head=32):
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|
| 181 |
|
| 182 |
return out
|
| 183 |
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| 185 |
ModelPrediction = namedtuple('ModelPrediction', ['pred_noise', 'pred_x_start'])
|
| 186 |
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|
| 586 |
else:
|
| 587 |
return pred
|
| 588 |
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|
| 589 |
def model_setup(model_config, print_info=False, cfg_str=None):
|
| 590 |
if print_info:
|
| 591 |
print('Setup the model with considering temporal attention be (BHW, T, C) ... ...')
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stldm/stldm_hf.py
CHANGED
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@@ -1,8 +1,17 @@
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import torch, random
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| 2 |
from torch import nn
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| 3 |
from einops import rearrange
|
| 4 |
|
| 5 |
from stldm.submodules import *
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| 6 |
|
| 7 |
class Down_Block(nn.Module):
|
| 8 |
def __init__(self, in_ch, hid_ch, out_ch, time_dim, is_last, patch_size=None, num_groups=8, heads=4, dim_head=32):
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@@ -172,12 +181,7 @@ class LDM(nn.Module):
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| 172 |
|
| 173 |
return out
|
| 174 |
|
| 175 |
-
|
| 176 |
-
from collections import namedtuple
|
| 177 |
-
from torch.cuda.amp import autocast
|
| 178 |
-
import torch.nn.functional as F
|
| 179 |
-
from einops import reduce
|
| 180 |
-
from tqdm.auto import tqdm
|
| 181 |
|
| 182 |
ModelPrediction = namedtuple('ModelPrediction', ['pred_noise', 'pred_x_start'])
|
| 183 |
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@@ -591,7 +595,6 @@ class GaussianDiffusion(
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|
| 591 |
else:
|
| 592 |
return pred
|
| 593 |
|
| 594 |
-
from stldm.modules import SimVPV2_Model, VAE
|
| 595 |
def model_setup(model_config, print_info=False, cfg_str=None):
|
| 596 |
if print_info:
|
| 597 |
print('Setup the model with considering temporal attention be (BHW, T, C) ... ...')
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|
| 1 |
+
# constants
|
| 2 |
+
from collections import namedtuple
|
| 3 |
+
from torch.cuda.amp import autocast
|
| 4 |
+
import torch.nn.functional as F
|
| 5 |
+
from einops import reduce
|
| 6 |
+
from tqdm.auto import tqdm
|
| 7 |
+
|
| 8 |
import torch, random
|
| 9 |
from torch import nn
|
| 10 |
from einops import rearrange
|
| 11 |
|
| 12 |
from stldm.submodules import *
|
| 13 |
+
from stldm.modules import SimVPV2_Model, VAE
|
| 14 |
+
|
| 15 |
|
| 16 |
class Down_Block(nn.Module):
|
| 17 |
def __init__(self, in_ch, hid_ch, out_ch, time_dim, is_last, patch_size=None, num_groups=8, heads=4, dim_head=32):
|
|
|
|
| 181 |
|
| 182 |
return out
|
| 183 |
|
| 184 |
+
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 185 |
|
| 186 |
ModelPrediction = namedtuple('ModelPrediction', ['pred_noise', 'pred_x_start'])
|
| 187 |
|
|
|
|
| 595 |
else:
|
| 596 |
return pred
|
| 597 |
|
|
|
|
| 598 |
def model_setup(model_config, print_info=False, cfg_str=None):
|
| 599 |
if print_info:
|
| 600 |
print('Setup the model with considering temporal attention be (BHW, T, C) ... ...')
|
stldm/stldm_spatial.py
CHANGED
|
@@ -1,8 +1,16 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
import torch, random
|
| 2 |
from torch import nn
|
| 3 |
from einops import rearrange
|
| 4 |
|
| 5 |
from stldm.submodules import *
|
|
|
|
| 6 |
|
| 7 |
class Down_Block(nn.Module):
|
| 8 |
def __init__(self, in_ch, hid_ch, out_ch, time_dim, is_last, patch_size=None, num_groups=8, heads=4, dim_head=32):
|
|
@@ -152,12 +160,7 @@ class LDM(nn.Module):
|
|
| 152 |
out = up_block(out, t, hids1.pop(), hids2.pop())
|
| 153 |
return out
|
| 154 |
|
| 155 |
-
|
| 156 |
-
from collections import namedtuple
|
| 157 |
-
from torch.cuda.amp import autocast
|
| 158 |
-
import torch.nn.functional as F
|
| 159 |
-
from einops import reduce
|
| 160 |
-
from tqdm.auto import tqdm
|
| 161 |
|
| 162 |
ModelPrediction = namedtuple('ModelPrediction', ['pred_noise', 'pred_x_start'])
|
| 163 |
|
|
@@ -562,7 +565,6 @@ class GaussianDiffusion(nn.Module):
|
|
| 562 |
else:
|
| 563 |
return pred
|
| 564 |
|
| 565 |
-
from stldm.modules import SimVPV2_Model, VAE
|
| 566 |
def model_setup(model_config, print_info=False, cfg_str=None):
|
| 567 |
if print_info:
|
| 568 |
print('Setup a Spatial diffusion with replacing a Temporal attention with Spatial attention')
|
|
|
|
| 1 |
+
# constants
|
| 2 |
+
from collections import namedtuple
|
| 3 |
+
from torch.cuda.amp import autocast
|
| 4 |
+
import torch.nn.functional as F
|
| 5 |
+
from einops import reduce
|
| 6 |
+
from tqdm.auto import tqdm
|
| 7 |
+
|
| 8 |
import torch, random
|
| 9 |
from torch import nn
|
| 10 |
from einops import rearrange
|
| 11 |
|
| 12 |
from stldm.submodules import *
|
| 13 |
+
from stldm.modules import SimVPV2_Model, VAE
|
| 14 |
|
| 15 |
class Down_Block(nn.Module):
|
| 16 |
def __init__(self, in_ch, hid_ch, out_ch, time_dim, is_last, patch_size=None, num_groups=8, heads=4, dim_head=32):
|
|
|
|
| 160 |
out = up_block(out, t, hids1.pop(), hids2.pop())
|
| 161 |
return out
|
| 162 |
|
| 163 |
+
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 164 |
|
| 165 |
ModelPrediction = namedtuple('ModelPrediction', ['pred_noise', 'pred_x_start'])
|
| 166 |
|
|
|
|
| 565 |
else:
|
| 566 |
return pred
|
| 567 |
|
|
|
|
| 568 |
def model_setup(model_config, print_info=False, cfg_str=None):
|
| 569 |
if print_info:
|
| 570 |
print('Setup a Spatial diffusion with replacing a Temporal attention with Spatial attention')
|
utilspp.py
CHANGED
|
@@ -1,116 +1,17 @@
|
|
| 1 |
-
import os
|
| 2 |
import torch
|
| 3 |
-
import numpy as np
|
| 4 |
-
import lpips as lp
|
| 5 |
-
import pandas as pd
|
| 6 |
-
import torchmetrics
|
| 7 |
import matplotlib.pyplot as plt
|
| 8 |
-
|
| 9 |
-
import torchvision.transforms as T
|
| 10 |
-
from torch import nn
|
| 11 |
|
| 12 |
from matplotlib.colors import ListedColormap, BoundaryNorm
|
| 13 |
from matplotlib.lines import Line2D
|
|
|
|
|
|
|
| 14 |
|
| 15 |
-
|
| 16 |
-
|
| 17 |
-
|
| 18 |
-
|
| 19 |
-
#
|
| 20 |
-
|
| 21 |
-
class SequentialLR(torch.optim.lr_scheduler._LRScheduler):
|
| 22 |
-
"""Receives the list of schedulers that is expected to be called sequentially during
|
| 23 |
-
optimization process and milestone points that provides exact intervals to reflect
|
| 24 |
-
which scheduler is supposed to be called at a given epoch.
|
| 25 |
-
|
| 26 |
-
Args:
|
| 27 |
-
schedulers (list): List of chained schedulers.
|
| 28 |
-
milestones (list): List of integers that reflects milestone points.
|
| 29 |
-
|
| 30 |
-
Example:
|
| 31 |
-
>>> # Assuming optimizer uses lr = 1. for all groups
|
| 32 |
-
>>> # lr = 0.1 if epoch == 0
|
| 33 |
-
>>> # lr = 0.1 if epoch == 1
|
| 34 |
-
>>> # lr = 0.9 if epoch == 2
|
| 35 |
-
>>> # lr = 0.81 if epoch == 3
|
| 36 |
-
>>> # lr = 0.729 if epoch == 4
|
| 37 |
-
>>> scheduler1 = ConstantLR(self.opt, factor=0.1, total_iters=2)
|
| 38 |
-
>>> scheduler2 = ExponentialLR(self.opt, gamma=0.9)
|
| 39 |
-
>>> scheduler = SequentialLR(self.opt, schedulers=[scheduler1, scheduler2], milestones=[2])
|
| 40 |
-
>>> for epoch in range(100):
|
| 41 |
-
>>> train(...)
|
| 42 |
-
>>> validate(...)
|
| 43 |
-
>>> scheduler.step()
|
| 44 |
-
"""
|
| 45 |
-
|
| 46 |
-
def __init__(self, optimizer, schedulers, milestones, last_epoch=-1, verbose=False):
|
| 47 |
-
for scheduler_idx in range(1, len(schedulers)):
|
| 48 |
-
if (schedulers[scheduler_idx].optimizer != schedulers[0].optimizer):
|
| 49 |
-
raise ValueError(
|
| 50 |
-
"Sequential Schedulers expects all schedulers to belong to the same optimizer, but "
|
| 51 |
-
"got schedulers at index {} and {} to be different".format(0, scheduler_idx)
|
| 52 |
-
)
|
| 53 |
-
if (len(milestones) != len(schedulers) - 1):
|
| 54 |
-
raise ValueError(
|
| 55 |
-
"Sequential Schedulers expects number of schedulers provided to be one more "
|
| 56 |
-
"than the number of milestone points, but got number of schedulers {} and the "
|
| 57 |
-
"number of milestones to be equal to {}".format(len(schedulers), len(milestones))
|
| 58 |
-
)
|
| 59 |
-
self.optimizer = optimizer
|
| 60 |
-
self._schedulers = schedulers
|
| 61 |
-
self._milestones = milestones
|
| 62 |
-
self.last_epoch = last_epoch + 1
|
| 63 |
-
|
| 64 |
-
def step(self, ref=None):
|
| 65 |
-
self.last_epoch += 1
|
| 66 |
-
idx = bisect_right(self._milestones, self.last_epoch)
|
| 67 |
-
if idx > 0 and self._milestones[idx - 1] == self.last_epoch:
|
| 68 |
-
self._schedulers[idx].step(0)
|
| 69 |
-
else:
|
| 70 |
-
# Check HERE
|
| 71 |
-
if isinstance(self._schedulers[idx], torch.optim.lr_scheduler.ReduceLROnPlateau):
|
| 72 |
-
self._schedulers[idx].step(ref)
|
| 73 |
-
else:
|
| 74 |
-
self._schedulers[idx].step()
|
| 75 |
-
|
| 76 |
-
def state_dict(self):
|
| 77 |
-
"""Returns the state of the scheduler as a :class:`dict`.
|
| 78 |
-
|
| 79 |
-
It contains an entry for every variable in self.__dict__ which
|
| 80 |
-
is not the optimizer.
|
| 81 |
-
The wrapped scheduler states will also be saved.
|
| 82 |
-
"""
|
| 83 |
-
state_dict = {key: value for key, value in self.__dict__.items() if key not in ('optimizer', '_schedulers')}
|
| 84 |
-
state_dict['_schedulers'] = [None] * len(self._schedulers)
|
| 85 |
-
|
| 86 |
-
for idx, s in enumerate(self._schedulers):
|
| 87 |
-
state_dict['_schedulers'][idx] = s.state_dict()
|
| 88 |
-
|
| 89 |
-
return state_dict
|
| 90 |
-
|
| 91 |
-
def load_state_dict(self, state_dict):
|
| 92 |
-
"""Loads the schedulers state.
|
| 93 |
-
|
| 94 |
-
Args:
|
| 95 |
-
state_dict (dict): scheduler state. Should be an object returned
|
| 96 |
-
from a call to :meth:`state_dict`.
|
| 97 |
-
"""
|
| 98 |
-
_schedulers = state_dict.pop('_schedulers')
|
| 99 |
-
self.__dict__.update(state_dict)
|
| 100 |
-
# Restore state_dict keys in order to prevent side effects
|
| 101 |
-
# https://github.com/pytorch/pytorch/issues/32756
|
| 102 |
-
state_dict['_schedulers'] = _schedulers
|
| 103 |
-
|
| 104 |
-
for idx, s in enumerate(_schedulers):
|
| 105 |
-
self._schedulers[idx].load_state_dict(s)
|
| 106 |
-
|
| 107 |
-
def warmup_lambda(warmup_steps, min_lr_ratio=0.1):
|
| 108 |
-
def ret_lambda(epoch):
|
| 109 |
-
if epoch <= warmup_steps:
|
| 110 |
-
return min_lr_ratio + (1.0 - min_lr_ratio) * epoch / warmup_steps
|
| 111 |
-
else:
|
| 112 |
-
return 1.0
|
| 113 |
-
return ret_lambda
|
| 114 |
|
| 115 |
# =======================================================================
|
| 116 |
# Utils in utils :)
|
|
@@ -131,281 +32,6 @@ def to_cpu_tensor(*args):
|
|
| 131 |
return out[0]
|
| 132 |
return out
|
| 133 |
|
| 134 |
-
def merge_leading_dims(tensor, n=2):
|
| 135 |
-
'''
|
| 136 |
-
Merge the first N dimension of a tensor
|
| 137 |
-
'''
|
| 138 |
-
return tensor.reshape((-1, *tensor.shape[n:]))
|
| 139 |
-
|
| 140 |
-
# =======================================================================
|
| 141 |
-
# Model Preparation, saving & loading (copied from utils.py)
|
| 142 |
-
# =======================================================================
|
| 143 |
-
def build_model_name(model_type, model_config):
|
| 144 |
-
'''
|
| 145 |
-
Build the model name (without extension)
|
| 146 |
-
'''
|
| 147 |
-
model_name = model_type + '_'
|
| 148 |
-
for k, v in model_config.items():
|
| 149 |
-
model_name += k
|
| 150 |
-
if type(v) is list or type(v) is tuple:
|
| 151 |
-
model_name += '-'
|
| 152 |
-
for i, item in enumerate(v):
|
| 153 |
-
model_name += (str(item) if type(item) is not bool else '') + ('-' if i < len(v)-1 else '')
|
| 154 |
-
else:
|
| 155 |
-
model_name += (('-' + str(v)) if type(v) is not bool else '')
|
| 156 |
-
model_name += '_'
|
| 157 |
-
return model_name[:-1]
|
| 158 |
-
|
| 159 |
-
def build_model_path(base_dir, dataset_type, model_type, timestamp=None):
|
| 160 |
-
if timestamp is None:
|
| 161 |
-
return os.path.join(base_dir, dataset_type, model_type)
|
| 162 |
-
elif timestamp == True:
|
| 163 |
-
return os.path.join(base_dir, dataset_type, model_type, pd.Timestamp.now().strftime('%Y%m%d%H%M%S'))
|
| 164 |
-
return os.path.join(base_dir, dataset_type, model_type, timestamp)
|
| 165 |
-
|
| 166 |
-
# =======================================================================
|
| 167 |
-
# Preprocess Function for Loading HKO-7 dataset
|
| 168 |
-
# =======================================================================
|
| 169 |
-
|
| 170 |
-
def hko7_preprocess(x_seq, x_mask, dt_clip, args):
|
| 171 |
-
resize = args.resize if 'resize' in args else x_seq.shape[-1]
|
| 172 |
-
seq_len = args.seq_len if 'seq_len' in args else 5
|
| 173 |
-
|
| 174 |
-
# post-process on HKO-10
|
| 175 |
-
x_seq = x_seq.transpose((1, 0, 2, 3, 4)) / 255. # => (batch_size, seq_length, 1, 480, 480)
|
| 176 |
-
if 'scale' in args and args.scale == 'non-linear':
|
| 177 |
-
x_seq = dutils.linear_to_nonlinear_batched(x_seq, dt_clip)
|
| 178 |
-
else:
|
| 179 |
-
x_seq = dutils.nonlinear_to_linear_batched(x_seq, dt_clip)
|
| 180 |
-
|
| 181 |
-
b, t, c, h, w = x_seq.shape
|
| 182 |
-
assert c == 1, f'# channels ({c}) != 1'
|
| 183 |
-
|
| 184 |
-
# resize (downsample) the images if necessary
|
| 185 |
-
x_seq = torch.Tensor(x_seq).float().reshape((b*t, c, h, w))
|
| 186 |
-
if resize != h:
|
| 187 |
-
tform = T.Compose([
|
| 188 |
-
T.ToPILImage(),
|
| 189 |
-
T.Resize(resize),
|
| 190 |
-
T.ToTensor(),
|
| 191 |
-
])
|
| 192 |
-
else:
|
| 193 |
-
tform = T.Compose([])
|
| 194 |
-
|
| 195 |
-
x_seq = torch.stack([tform(x_frame) for x_frame in x_seq], dim=0)
|
| 196 |
-
x_seq = x_seq.reshape((b, t, c, resize, resize))
|
| 197 |
-
|
| 198 |
-
x, y = x_seq[:, :seq_len], x_seq[:, seq_len:]
|
| 199 |
-
return x, y
|
| 200 |
-
|
| 201 |
-
# =======================================================================
|
| 202 |
-
# Evaluation Metrics-Related
|
| 203 |
-
# =======================================================================
|
| 204 |
-
|
| 205 |
-
mae = lambda *args: torch.nn.functional.l1_loss(*args).cpu().detach().numpy()
|
| 206 |
-
mse = lambda *args: torch.nn.functional.mse_loss(*args).cpu().detach().numpy()
|
| 207 |
-
|
| 208 |
-
def ssim(y_pred, y):
|
| 209 |
-
y, y_pred = to_cpu_tensor(y, y_pred)
|
| 210 |
-
b, t, c, h, w = y.shape
|
| 211 |
-
y = y.reshape((b*t, c, h, w))
|
| 212 |
-
y_pred = y_pred.reshape((b*t, c, h, w))
|
| 213 |
-
# to further ensure any of the input is not negative
|
| 214 |
-
y = torch.clamp(y, 0, 1)
|
| 215 |
-
y_pred = torch.clamp(y_pred, 0, 1)
|
| 216 |
-
return torchmetrics.image.StructuralSimilarityIndexMeasure(data_range=1.0)(y_pred, y)
|
| 217 |
-
|
| 218 |
-
def psnr(y_pred, y):
|
| 219 |
-
y, y_pred = to_cpu_tensor(y, y_pred)
|
| 220 |
-
b, t, c, h, w = y.shape
|
| 221 |
-
y = y.reshape((b*t, c, h, w))
|
| 222 |
-
y_pred = y_pred.reshape((b*t, c, h, w))
|
| 223 |
-
acc_score = 0
|
| 224 |
-
for i in range(b*t):
|
| 225 |
-
acc_score += torchmetrics.image.PeakSignalNoiseRatio(data_range=1.0)(y_pred[i], y[i]) / (b*t)
|
| 226 |
-
return acc_score
|
| 227 |
-
|
| 228 |
-
GLOBAL_LPIPS_OBJ = None # a static variable
|
| 229 |
-
def lpips64(y_pred, y, net='vgg'):
|
| 230 |
-
# convert the image range into [-1, 1], assuming the input range to be [0, 1]
|
| 231 |
-
y = merge_leading_dims(y)
|
| 232 |
-
y_pred = merge_leading_dims(y_pred)
|
| 233 |
-
|
| 234 |
-
y = torch.nn.functional.interpolate(y, (64, 64), mode='bicubic').clamp(0,1)
|
| 235 |
-
y_pred = torch.nn.functional.interpolate(y_pred, (64, 64), mode='bicubic').clamp(0,1)
|
| 236 |
-
|
| 237 |
-
y = (2 * y - 1)
|
| 238 |
-
y_pred = (2 * y_pred - 1)
|
| 239 |
-
global GLOBAL_LPIPS_OBJ
|
| 240 |
-
if GLOBAL_LPIPS_OBJ is None:
|
| 241 |
-
GLOBAL_LPIPS_OBJ = lp.LPIPS(net=net).to(y.device)
|
| 242 |
-
return GLOBAL_LPIPS_OBJ(y_pred, y).mean()
|
| 243 |
-
|
| 244 |
-
def tfpn(y_pred, y, threshold, radius=1):
|
| 245 |
-
'''
|
| 246 |
-
convert to cpu, and merge the first two dimensions
|
| 247 |
-
'''
|
| 248 |
-
y = merge_leading_dims(y)
|
| 249 |
-
y_pred = merge_leading_dims(y_pred)
|
| 250 |
-
with torch.no_grad():
|
| 251 |
-
if radius > 1:
|
| 252 |
-
pool = nn.MaxPool2d(radius)
|
| 253 |
-
y = pool(y)
|
| 254 |
-
y_pred = pool(y_pred)
|
| 255 |
-
y = torch.where(y >= threshold, 1, 0)
|
| 256 |
-
y_pred = torch.where(y_pred >= threshold, 1, 0)
|
| 257 |
-
mat = torchmetrics.functional.confusion_matrix(y_pred, y, task='binary', threshold=threshold)
|
| 258 |
-
(tn, fp), (fn, tp) = to_cpu_tensor(mat)
|
| 259 |
-
return tp, tn, fp, fn
|
| 260 |
-
|
| 261 |
-
def tfpn_pool(y_pred, y, threshold, radius):
|
| 262 |
-
y_pred = merge_leading_dims(y_pred)
|
| 263 |
-
y = merge_leading_dims(y)
|
| 264 |
-
pool = nn.MaxPool2d(radius, stride=radius//4 if radius//4 > 0 else radius)
|
| 265 |
-
with torch.no_grad():
|
| 266 |
-
y = torch.where(y>=threshold, 1, 0).float()
|
| 267 |
-
y_pred = torch.where(y_pred>=threshold, 1, 0).float()
|
| 268 |
-
y = pool(y)
|
| 269 |
-
y_pred = pool(y_pred)
|
| 270 |
-
mat = torchmetrics.functional.confusion_matrix(y_pred, y, task='binary', threshold=threshold)
|
| 271 |
-
(tn, fp), (fn, tp) = to_cpu_tensor(mat)
|
| 272 |
-
return tp, tn, fp, fn
|
| 273 |
-
|
| 274 |
-
def csi(tp, tn, fp, fn):
|
| 275 |
-
'''Critical Success Index. The larger the better.'''
|
| 276 |
-
if (tp + fn + fp) < 1e-7:
|
| 277 |
-
return 0.
|
| 278 |
-
return tp / (tp + fn + fp)
|
| 279 |
-
|
| 280 |
-
def hss(tp, tn, fp, fn):
|
| 281 |
-
'''Heidke Skill Score. (-inf, 1]. Larger better.'''
|
| 282 |
-
if (tp+fn)*(fn+tn) + (tp+fp)*(fp+tn) == 0:
|
| 283 |
-
return 0.
|
| 284 |
-
return 2 * (tp*tn - fp*fn) / ((tp+fn)*(fn+tn) + (tp+fp)*(fp+tn))
|
| 285 |
-
|
| 286 |
-
# =======================================================================
|
| 287 |
-
# Data Visualization
|
| 288 |
-
# =======================================================================
|
| 289 |
-
|
| 290 |
-
def torch_visualize(sequences, savedir=None, horizontal=10, vmin=0, vmax=1):
|
| 291 |
-
'''
|
| 292 |
-
input: sequences, a list/dict of numpy/torch arrays with shape (B, T, C, H, W)
|
| 293 |
-
C is assumed to be 1 and squeezed
|
| 294 |
-
If batch > 1, only the first sequence will be printed
|
| 295 |
-
'''
|
| 296 |
-
# First pass: compute the vertical height and convert to proper format
|
| 297 |
-
vertical = 0
|
| 298 |
-
display_texts = []
|
| 299 |
-
if (type(sequences) is dict):
|
| 300 |
-
temp = []
|
| 301 |
-
for k, v in sequences.items():
|
| 302 |
-
vertical += int(np.ceil(v.shape[1] / horizontal))
|
| 303 |
-
temp.append(v)
|
| 304 |
-
display_texts.append(k)
|
| 305 |
-
sequences = temp
|
| 306 |
-
else:
|
| 307 |
-
for i, sequence in enumerate(sequences):
|
| 308 |
-
vertical += int(np.ceil(sequence.shape[1] / horizontal))
|
| 309 |
-
display_texts.append(f'Item {i+1}')
|
| 310 |
-
sequences = to_cpu_tensor(*sequences)
|
| 311 |
-
# Plot the sequences
|
| 312 |
-
j = 0
|
| 313 |
-
fig, axes = plt.subplots(vertical, horizontal, figsize=(2*horizontal, 2*vertical), tight_layout=True)
|
| 314 |
-
plt.setp(axes, xticks=[], yticks=[])
|
| 315 |
-
for k, sequence in enumerate(sequences):
|
| 316 |
-
# only take the first batch, now seq[0] is the temporal dim
|
| 317 |
-
sequence = sequence[0].squeeze() # (T, H, W)
|
| 318 |
-
axes[j, 0].set_ylabel(display_texts[k])
|
| 319 |
-
for i, frame in enumerate(sequence):
|
| 320 |
-
j_shift = j + i // horizontal
|
| 321 |
-
i_shift = i % horizontal
|
| 322 |
-
axes[j_shift, i_shift].imshow(frame, vmin=vmin, vmax=vmax, cmap='gray')
|
| 323 |
-
j += int(np.ceil(sequence.shape[0] / horizontal))
|
| 324 |
-
if savedir:
|
| 325 |
-
plt.savefig(savedir + '' if savedir.endswith('.png') else '.png')
|
| 326 |
-
plt.close()
|
| 327 |
-
else:
|
| 328 |
-
plt.show()
|
| 329 |
-
|
| 330 |
-
""" Visualize function with colorbar and a line seprate input and output """
|
| 331 |
-
def color_visualize(sequences, savedir='', horizontal=5, skip=1, ypos=0):
|
| 332 |
-
'''
|
| 333 |
-
input: sequences, a list/dict of numpy/torch arrays with shape (B, T, C, H, W)
|
| 334 |
-
C is assumed to be 1 and squeezed
|
| 335 |
-
If batch > 1, only the first sequence will be printed
|
| 336 |
-
'''
|
| 337 |
-
plt.style.use(['science', 'no-latex'])
|
| 338 |
-
VIL_COLORS = [[0, 0, 0],
|
| 339 |
-
[0.30196078431372547, 0.30196078431372547, 0.30196078431372547],
|
| 340 |
-
[0.1568627450980392, 0.7450980392156863, 0.1568627450980392],
|
| 341 |
-
[0.09803921568627451, 0.5882352941176471, 0.09803921568627451],
|
| 342 |
-
[0.0392156862745098, 0.4117647058823529, 0.0392156862745098],
|
| 343 |
-
[0.0392156862745098, 0.29411764705882354, 0.0392156862745098],
|
| 344 |
-
[0.9607843137254902, 0.9607843137254902, 0.0],
|
| 345 |
-
[0.9294117647058824, 0.6745098039215687, 0.0],
|
| 346 |
-
[0.9411764705882353, 0.43137254901960786, 0.0],
|
| 347 |
-
[0.6274509803921569, 0.0, 0.0],
|
| 348 |
-
[0.9058823529411765, 0.0, 1.0]]
|
| 349 |
-
|
| 350 |
-
VIL_LEVELS = [0.0, 16.0, 31.0, 59.0, 74.0, 100.0, 133.0, 160.0, 181.0, 219.0, 255.0]
|
| 351 |
-
|
| 352 |
-
# First pass: compute the vertical height and convert to proper format
|
| 353 |
-
vertical = 0
|
| 354 |
-
display_texts = []
|
| 355 |
-
if (type(sequences) is dict):
|
| 356 |
-
temp = []
|
| 357 |
-
for k, v in sequences.items():
|
| 358 |
-
vertical += int(np.ceil(v.shape[1] / horizontal))
|
| 359 |
-
temp.append(v)
|
| 360 |
-
display_texts.append(k)
|
| 361 |
-
sequences = temp
|
| 362 |
-
else:
|
| 363 |
-
for i, sequence in enumerate(sequences):
|
| 364 |
-
vertical += int(np.ceil(sequence.shape[1] / horizontal))
|
| 365 |
-
display_texts.append(f'Item {i+1}')
|
| 366 |
-
sequences = to_cpu_tensor(*sequences)
|
| 367 |
-
# Plot the sequences
|
| 368 |
-
j = 0
|
| 369 |
-
fig, axes = plt.subplots(vertical, horizontal, figsize=(2*horizontal, 2*vertical), tight_layout=True)
|
| 370 |
-
plt.subplots_adjust(hspace=0.0, wspace=0.0) # tight layout
|
| 371 |
-
plt.setp(axes, xticks=[], yticks=[])
|
| 372 |
-
for k, sequence in enumerate(sequences):
|
| 373 |
-
# only take the first batch, now seq[0] is the temporal dim
|
| 374 |
-
sequence = sequence[0].squeeze() # (T, H, W)
|
| 375 |
-
|
| 376 |
-
## =================
|
| 377 |
-
# = labels of time =
|
| 378 |
-
if k == 0:
|
| 379 |
-
for i in range(len(sequence)):
|
| 380 |
-
axes[j, i].set_xlabel(f'$t-{(len(sequence)-i)-1}$', fontsize=16)
|
| 381 |
-
axes[j, i].xaxis.set_label_position('top')
|
| 382 |
-
elif k == len(sequences)-1:
|
| 383 |
-
for i in range(len(sequence)):
|
| 384 |
-
axes[j, i].set_xlabel(f'$t+{skip*i+1}$', fontsize=16)
|
| 385 |
-
axes[j, i].xaxis.set_label_position('bottom')
|
| 386 |
-
## =================
|
| 387 |
-
axes[j, 0].set_ylabel(display_texts[k], fontsize=16)
|
| 388 |
-
for i, frame in enumerate(sequence):
|
| 389 |
-
j_shift = j + i // horizontal
|
| 390 |
-
i_shift = i % horizontal
|
| 391 |
-
im = axes[j_shift, i_shift].imshow(frame*255, cmap=ListedColormap(VIL_COLORS), \
|
| 392 |
-
norm=BoundaryNorm(VIL_LEVELS, ListedColormap(VIL_COLORS).N))
|
| 393 |
-
j += int(np.ceil(sequence.shape[0] / horizontal))
|
| 394 |
-
|
| 395 |
-
## = plot splittin line =
|
| 396 |
-
if ypos == 0:
|
| 397 |
-
ypos = 1 - 1 / len(sequences) - 0.017
|
| 398 |
-
fig.lines.append(Line2D((0, 1), (ypos, ypos), transform=fig.transFigure, ls='--', linewidth=2, color='#444'))
|
| 399 |
-
# color bar
|
| 400 |
-
cax = fig.add_axes([1, 0.05, 0.02, 0.5])
|
| 401 |
-
fig.colorbar(im, cax=cax)
|
| 402 |
-
## =================
|
| 403 |
-
if savedir:
|
| 404 |
-
plt.savefig(savedir + '' if len(savedir)>0 else 'out.png')
|
| 405 |
-
plt.close()
|
| 406 |
-
else:
|
| 407 |
-
plt.show()
|
| 408 |
-
|
| 409 |
from tempfile import NamedTemporaryFile
|
| 410 |
|
| 411 |
""" Visualize function with colorbar and a line seprate input and output """
|
|
@@ -491,7 +117,6 @@ def gradio_visualize(sequences, horizontal=5, skip=1, ypos=0):
|
|
| 491 |
|
| 492 |
return file_path
|
| 493 |
|
| 494 |
-
import matplotlib.animation as animation
|
| 495 |
|
| 496 |
def gradio_gif(sequences, T):
|
| 497 |
'''
|
|
@@ -550,17 +175,4 @@ def gradio_gif(sequences, T):
|
|
| 550 |
file_path = ff.name
|
| 551 |
|
| 552 |
plt.close()
|
| 553 |
-
return file_path
|
| 554 |
-
|
| 555 |
-
# import matplotlib.pyplot as plt
|
| 556 |
-
# import matplotlib.animation as animation
|
| 557 |
-
# def make_gif(frames, save_path):
|
| 558 |
-
# fig, ax = plt.subplots(figsize=(4,4))
|
| 559 |
-
# im = ax.imshow(frames[0].squeeze(), cmap='gray', vmin=0, vmax=1, animated=True)
|
| 560 |
-
# ax.set_axis_off()
|
| 561 |
-
|
| 562 |
-
# def update(i):
|
| 563 |
-
# im.set_array(frames[i].squeeze())
|
| 564 |
-
# return im,
|
| 565 |
-
# animation_fig =
|
| 566 |
-
# animation_fig.save(f"./{save_path}.gif")
|
|
|
|
|
|
|
| 1 |
import torch
|
|
|
|
|
|
|
|
|
|
|
|
|
| 2 |
import matplotlib.pyplot as plt
|
| 3 |
+
import torch.nn.functional as F
|
|
|
|
|
|
|
| 4 |
|
| 5 |
from matplotlib.colors import ListedColormap, BoundaryNorm
|
| 6 |
from matplotlib.lines import Line2D
|
| 7 |
+
import matplotlib.animation as animation
|
| 8 |
+
import scienceplots
|
| 9 |
|
| 10 |
+
def resize(seq, size):
|
| 11 |
+
# seq shape : (B, T, 1, H, W)
|
| 12 |
+
seq = F.interpolate(seq.squeeze(dim=2), size=size, mode='bilinear', align_corners=False) # (B, T, H, W)
|
| 13 |
+
seq = seq.clamp(0,1)
|
| 14 |
+
return seq.unsqueeze(2) # (B, T, 1, H, W)
|
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|
| 15 |
|
| 16 |
# =======================================================================
|
| 17 |
# Utils in utils :)
|
|
|
|
| 32 |
return out[0]
|
| 33 |
return out
|
| 34 |
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|
| 35 |
from tempfile import NamedTemporaryFile
|
| 36 |
|
| 37 |
""" Visualize function with colorbar and a line seprate input and output """
|
|
|
|
| 117 |
|
| 118 |
return file_path
|
| 119 |
|
|
|
|
| 120 |
|
| 121 |
def gradio_gif(sequences, T):
|
| 122 |
'''
|
|
|
|
| 175 |
file_path = ff.name
|
| 176 |
|
| 177 |
plt.close()
|
| 178 |
+
return file_path
|
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