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fca5ceb 60b8d69 fca5ceb 6d6c2e6 fca5ceb 60b8d69 fca5ceb 60b8d69 fca5ceb 60b8d69 fca5ceb 60b8d69 fca5ceb 60b8d69 19e9481 fec13e9 19e9481 fec13e9 19e9481 60b8d69 fca5ceb 60b8d69 fca5ceb | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 | # NeuroBridge Enterprise — Hugging Face Spaces deployment image
# Single container running FastAPI (port 8000) + Streamlit (port 7860).
# HF Spaces routes :7860 to the public URL automatically.
FROM python:3.12-slim AS base
ENV PYTHONDONTWRITEBYTECODE=1 \
PYTHONUNBUFFERED=1 \
PIP_DISABLE_PIP_VERSION_CHECK=1 \
PIP_NO_CACHE_DIR=1 \
DEPLOY_ENV=hf_spaces
# --- system deps for RDKit, nibabel, MNE ---
RUN apt-get update && apt-get install -y --no-install-recommends \
build-essential \
libgomp1 \
libxrender1 \
libsm6 \
libxext6 \
supervisor \
&& rm -rf /var/lib/apt/lists/*
WORKDIR /app
# --- Python deps ---
COPY requirements.txt ./
RUN pip install -r requirements.txt
# --- project source ---
COPY src/ ./src/
COPY tests/fixtures/ ./tests/fixtures/
COPY supervisord.conf ./supervisord.conf
# Seed raw data from fixtures so the deployed Signal/Image/Molecule tabs
# work on first click. Then run all three pipelines so mlruns/ contains
# one run per modality — feeds /experiments/runs and the BBB provenance
# strip. data/raw/* is gitignored locally so we cannot COPY it.
RUN mkdir -p data/raw data/processed && \
cp tests/fixtures/bbbp_sample.csv data/raw/bbbp.csv && \
cp tests/fixtures/eeg_sample.fif data/raw/eeg.fif && \
python -m src.pipelines.bbb_pipeline && \
python -m src.models.bbb_model && \
python -c "from pathlib import Path; from src.pipelines.eeg_pipeline import run_pipeline; run_pipeline(input_path=Path('tests/fixtures/eeg_sample.fif'), output_path=Path('data/processed/eeg_features.parquet'))" && \
python -c "from pathlib import Path; from src.pipelines.mri_pipeline import run_pipeline; run_pipeline(input_dir=Path('tests/fixtures/mri_sample'), sites_csv=Path('tests/fixtures/mri_sample/sites.csv'), output_path=Path('data/processed/mri_features.parquet'))"
# --- HF Spaces convention ---
EXPOSE 7860
# --- launch FastAPI + Streamlit under supervisord ---
CMD ["supervisord", "-n", "-c", "/app/supervisord.conf"]
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