feat: 3-step agentic pipeline — A/B comparison, red-flag triage, SOAP note
Browse filesArchitecture upgrade from single-prompt to 3-step micro-pipeline:
- Step 1 Vision Agent: objective visual description (supports 1 or 2 images)
- Step 2 Clinical Agent: clinical reasoning → strict triage JSON
- Step 3 Format Agent: patient-friendly message + SOAP note
New features:
- A/B Image Comparison: toggle between Standard (1 image) and Compare (2 images)
mode; Vision Agent describes progression between Day 1 and Day X
- Red-Flag Triage: flashing animated banner when triage_level == High
- SOAP Note: auto-generated structured clinical export with copy button
- Output split into Patient View tab and Export for Doctor (SOAP) tab
- Possible conditions shown as chips alongside triage severity badge
Co-Authored-By: Duy Khang <dikheng@users.noreply.huggingface.co>
- app.py +229 -50
- src/agents.py +64 -0
- src/inference.py +31 -12
- src/model_loader.py +20 -15
- src/prompts.py +53 -0
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@@ -60,6 +60,17 @@ _I18N = {
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"map_label": "Anatomical Map",
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"map_select": "click to select",
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"map_selected": "{n} region(s) selected",
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},
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"vn": {
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"img_label": "Tải lên hình ảnh y tế",
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"map_label": "Bản đồ giải phẫu",
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"map_select": "nhấn để chọn",
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"map_selected": "{n} vùng đã chọn",
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},
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"zh": {
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"img_label": "上传医学图像",
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@@ -118,6 +140,17 @@ _I18N = {
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"map_label": "解剖图",
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"map_select": "点击选择",
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"map_selected": "已选 {n} 个部位",
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},
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"es": {
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"img_label": "Subir imagen médica",
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@@ -147,6 +180,17 @@ _I18N = {
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"map_label": "Mapa anatómico",
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"map_select": "haga clic para seleccionar",
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"map_selected": "{n} región(es) seleccionada(s)",
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},
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"fr": {
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"img_label": "Télécharger une image médicale",
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"map_label": "Carte anatomique",
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"map_select": "cliquer pour sélectionner",
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"map_selected": "{n} région(s) sélectionnée(s)",
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},
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"ja": {
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"img_label": "医療画像をアップロード",
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"map_label": "解剖マップ",
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"map_select": "クリックして選択",
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"map_selected": "{n} 部位選択中",
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},
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}
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@@ -515,18 +581,16 @@ def _empty_output_html(lang: str) -> str:
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)
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def _build_result_html(result: dict, lang: str) -> str:
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t
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score = result.get("confidence_score", 0)
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metrics = result.get("_metrics", {})
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-
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actions_html = "".join(
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f"<li style='margin:5px 0; color:#d1d5db;'>{a}</li>" for a in actions
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) if actions else "<li style='color:#6b7280;'>—</li>"
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backend_tag = (
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"<span style='font-size:0.7rem; background:#052e16; color:#86efac; "
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@@ -534,6 +598,39 @@ def _build_result_html(result: dict, lang: str) -> str:
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"border:1px solid #16a34a;'>AMD Cloud</span>"
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)
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return f"""
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<div style='background:#111827; border:1px solid #ED1C24; border-radius:12px;
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padding:20px; font-family:Arial,sans-serif; color:#f9fafb;'>
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@@ -544,34 +641,31 @@ def _build_result_html(result: dict, lang: str) -> str:
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<div style='font-size:1.1rem; font-weight:700; color:#ED1C24;'>
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MediVision {backend_tag}
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</div>
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-
<div style='font-size:0.75rem; color:#6b7280;'>AMD MI300X · ROCm · Qwen2.5-VL-7B</div>
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</div>
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</div>
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{_metrics_bar(metrics, t)}
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<div style='background:#1f2937; border-radius:8px; padding:14px; margin-bottom:12px;'>
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<div style='font-size:0.75rem; text-transform:uppercase; letter-spacing:.05em;
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color:#9ca3af; margin-bottom:6px;'>{t['
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<
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</div>
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<div style='background:#1f2937; border-radius:8px; padding:14px; margin-bottom:12px;'>
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<div style='font-size:0.75rem; text-transform:uppercase; letter-spacing:.05em;
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color:#9ca3af; margin-bottom:8px;'>{t['
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{
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</div>
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<div style='background:#1f2937; border-radius:8px; padding:14px; margin-bottom:12px;'>
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{_confidence_bar(score, t['confidence_label'])}
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</div>
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<div style='background:#1f2937; border-radius:8px; padding:14px; margin-bottom:12px;'>
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<div style='font-size:0.75rem; text-transform:uppercase; letter-spacing:.05em;
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color:#9ca3af; margin-bottom:8px;'>{t['actions_label']}</div>
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{actions_html}
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</ul>
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</div>
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<div style='background:#1a1a2e; border-left:4px solid #ED1C24; border-radius:4px;
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"""
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# ---------------------------------------------------------------------------
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# UI update helpers
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# ---------------------------------------------------------------------------
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f"<p style='font-size:0.75rem; color:#6b7280; margin:4px 0 10px;'>{t['input_hint']}</p>"
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)
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return (
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gr.update(label=t["img_label"]),
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gr.update(label=t["symptoms_label"], placeholder=t["symptoms_placeholder"]),
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gr.update(value=t["analyze_btn"]),
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gr.update(label=t["region_optional_label"], choices=new_choices, value=translated),
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def on_lang_change(lang_choice: str, image, symptoms: str, selected_regions):
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lang = _LANG_MAP.get(lang_choice, "en")
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t = _I18N[lang]
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-
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region = _regions_to_prompt(selected_regions)
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has_content = bool(image) or bool(symptoms and symptoms.strip())
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if has_content:
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try:
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result = get_pipeline().process(image, (symptoms or "").strip(), lang=lang, region=region)
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out_upd
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except Exception as exc:
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out_upd
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else:
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out_upd
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return
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def on_load(request: gr.Request):
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lang_display = _detect_lang_from_header(
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request.headers.get("accept-language", "")
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)
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-
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lang = _LANG_MAP.get(lang_display, "en")
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-
return
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# ---------------------------------------------------------------------------
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# Predict
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# ---------------------------------------------------------------------------
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def predict(
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lang = _LANG_MAP.get(lang_choice, "en")
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t = _I18N[lang]
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if not
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return _empty_output_html(lang), get_backend_status_html(lang)
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region = _regions_to_prompt(selected_regions)
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try:
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result = get_pipeline().process(
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except Exception as exc:
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return _error_html(t, exc), get_backend_status_html(lang)
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# ---------------------------------------------------------------------------
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letter-spacing: 0.04em;
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}
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footer { display: none !important; }
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::-webkit-scrollbar { width: 6px; }
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::-webkit-scrollbar-track { background: #111827; }
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::-webkit-scrollbar-thumb { background: #374151; border-radius: 3px; }
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with gr.Row(equal_height=False):
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with gr.Column(scale=1, min_width=300):
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-
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-
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)
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symptoms_txt = gr.Textbox(
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label="Symptoms Description",
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placeholder="Describe what you feel — e.g. itchy red patch for 3 days...",
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)
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with gr.Column(scale=1, min_width=340):
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-
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-
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-
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# ── Events ───────────────────────────────────────────────────────────────
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# SVG click → toggle region in dropdown + re-render SVG
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svg_click_bridge.input(
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fn=on_svg_click,
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lang_radio.change(
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fn=on_lang_change,
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inputs=[lang_radio, input_img, symptoms_txt, region_selector],
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-
outputs=[
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)
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submit_btn.click(
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fn=predict,
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inputs=[input_img, symptoms_txt, lang_radio, region_selector],
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outputs=[output_html, status_bar],
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api_name="analyze",
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)
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demo.load(
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fn=on_load,
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inputs=[],
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outputs=[
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)
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gr.HTML(FOOTER_HTML)
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"map_label": "Anatomical Map",
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"map_select": "click to select",
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"map_selected": "{n} region(s) selected",
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+
"img_mode_label": "Upload Mode",
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+
"img_mode_standard": "Standard (1 image)",
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+
"img_mode_compare": "Compare (2 images — before & after)",
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+
"img_label_day1": "Medical Image (Day 1)",
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+
"img_label_dayx": "Comparison Image (Day X)",
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"tab_patient": "Patient View",
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"tab_doctor": "Export for Doctor (SOAP)",
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"critical_warning": "⚠️ CRITICAL: Severe symptoms detected. Please visit a medical facility within 24 hours.",
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+
"conditions_label": "Possible Conditions",
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+
"soap_copy_btn": "Copy SOAP Note",
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"soap_empty": "Run an analysis to generate the SOAP note.",
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},
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"vn": {
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"img_label": "Tải lên hình ảnh y tế",
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"map_label": "Bản đồ giải phẫu",
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"map_select": "nhấn để chọn",
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"map_selected": "{n} vùng đã chọn",
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+
"img_mode_label": "Chế độ tải ảnh",
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+
"img_mode_standard": "Tiêu chuẩn (1 ảnh)",
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+
"img_mode_compare": "So sánh (2 ảnh — trước & sau)",
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+
"img_label_day1": "Ảnh y tế (Ngày 1)",
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+
"img_label_dayx": "Ảnh so sánh (Ngày X)",
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+
"tab_patient": "Dành cho bệnh nhân",
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+
"tab_doctor": "Xuất cho bác sĩ (SOAP)",
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"critical_warning": "⚠️ CẢNH BÁO: Triệu chứng nghiêm trọng được phát hiện. Vui lòng đến cơ sở y tế trong vòng 24 giờ.",
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+
"conditions_label": "Tình trạng có thể",
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"soap_copy_btn": "Sao chép SOAP",
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"soap_empty": "Thực hiện phân tích để tạo ghi chú SOAP.",
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},
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"zh": {
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"img_label": "上传医学图像",
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"map_label": "解剖图",
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"map_select": "点击选择",
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"map_selected": "已选 {n} 个部位",
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+
"img_mode_label": "上传模式",
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+
"img_mode_standard": "标准模式(1张图片)",
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+
"img_mode_compare": "对比模式(2张图片 — 前后对比)",
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+
"img_label_day1": "医疗图像(第1天)",
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+
"img_label_dayx": "对比图像(第X天)",
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+
"tab_patient": "患者视图",
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+
"tab_doctor": "导出给医生(SOAP)",
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"critical_warning": "⚠️ 严重警告:检测到严重症状。请在24小时内前往医疗机构就诊。",
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+
"conditions_label": "可能的病症",
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+
"soap_copy_btn": "复制SOAP记录",
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+
"soap_empty": "运行分析以生成SOAP记录。",
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},
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"es": {
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"img_label": "Subir imagen médica",
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"map_label": "Mapa anatómico",
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"map_select": "haga clic para seleccionar",
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"map_selected": "{n} región(es) seleccionada(s)",
|
| 183 |
+
"img_mode_label": "Modo de carga",
|
| 184 |
+
"img_mode_standard": "Estándar (1 imagen)",
|
| 185 |
+
"img_mode_compare": "Comparar (2 imágenes — antes y después)",
|
| 186 |
+
"img_label_day1": "Imagen médica (Día 1)",
|
| 187 |
+
"img_label_dayx": "Imagen de comparación (Día X)",
|
| 188 |
+
"tab_patient": "Vista del paciente",
|
| 189 |
+
"tab_doctor": "Exportar para médico (SOAP)",
|
| 190 |
+
"critical_warning": "⚠️ CRÍTICO: Síntomas graves detectados. Por favor, acuda a un centro médico en las próximas 24 horas.",
|
| 191 |
+
"conditions_label": "Posibles condiciones",
|
| 192 |
+
"soap_copy_btn": "Copiar nota SOAP",
|
| 193 |
+
"soap_empty": "Ejecute un análisis para generar la nota SOAP.",
|
| 194 |
},
|
| 195 |
"fr": {
|
| 196 |
"img_label": "Télécharger une image médicale",
|
|
|
|
| 220 |
"map_label": "Carte anatomique",
|
| 221 |
"map_select": "cliquer pour sélectionner",
|
| 222 |
"map_selected": "{n} région(s) sélectionnée(s)",
|
| 223 |
+
"img_mode_label": "Mode de téléchargement",
|
| 224 |
+
"img_mode_standard": "Standard (1 image)",
|
| 225 |
+
"img_mode_compare": "Comparer (2 images — avant et après)",
|
| 226 |
+
"img_label_day1": "Image médicale (Jour 1)",
|
| 227 |
+
"img_label_dayx": "Image de comparaison (Jour X)",
|
| 228 |
+
"tab_patient": "Vue patient",
|
| 229 |
+
"tab_doctor": "Exporter pour le médecin (SOAP)",
|
| 230 |
+
"critical_warning": "⚠️ CRITIQUE : Symptômes graves détectés. Veuillez vous rendre dans un établissement médical dans les 24 heures.",
|
| 231 |
+
"conditions_label": "Conditions possibles",
|
| 232 |
+
"soap_copy_btn": "Copier la note SOAP",
|
| 233 |
+
"soap_empty": "Lancez une analyse pour générer la note SOAP.",
|
| 234 |
},
|
| 235 |
"ja": {
|
| 236 |
"img_label": "医療画像をアップロード",
|
|
|
|
| 260 |
"map_label": "解剖マップ",
|
| 261 |
"map_select": "クリックして選択",
|
| 262 |
"map_selected": "{n} 部位選択中",
|
| 263 |
+
"img_mode_label": "アップロードモード",
|
| 264 |
+
"img_mode_standard": "標準(画像1枚)",
|
| 265 |
+
"img_mode_compare": "比較(画像2枚 — 経過観察)",
|
| 266 |
+
"img_label_day1": "医療画像(第1日)",
|
| 267 |
+
"img_label_dayx": "比較画像(第X日)",
|
| 268 |
+
"tab_patient": "患者向け",
|
| 269 |
+
"tab_doctor": "医師向けエクスポート(SOAP)",
|
| 270 |
+
"critical_warning": "⚠️ 重大:重篤な症状が検出されました。24時間以内に医療機関を受診してください。",
|
| 271 |
+
"conditions_label": "考えられる疾患",
|
| 272 |
+
"soap_copy_btn": "SOAPノートをコピー",
|
| 273 |
+
"soap_empty": "分析を実行してSOAPノートを生成します。",
|
| 274 |
},
|
| 275 |
}
|
| 276 |
|
|
|
|
| 581 |
)
|
| 582 |
|
| 583 |
|
| 584 |
+
def _empty_soap_html(lang: str) -> str:
|
| 585 |
+
return _build_soap_html("", lang)
|
| 586 |
+
|
| 587 |
+
|
| 588 |
def _build_result_html(result: dict, lang: str) -> str:
|
| 589 |
+
t = _I18N.get(lang, _I18N["en"])
|
| 590 |
+
triage = result.get("triage_level", "Low")
|
| 591 |
+
patient_msg = result.get("patient_message", "")
|
| 592 |
+
conditions = result.get("possible_conditions", [])
|
| 593 |
+
metrics = result.get("_metrics", {})
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 594 |
|
| 595 |
backend_tag = (
|
| 596 |
"<span style='font-size:0.7rem; background:#052e16; color:#86efac; "
|
|
|
|
| 598 |
"border:1px solid #16a34a;'>AMD Cloud</span>"
|
| 599 |
)
|
| 600 |
|
| 601 |
+
# Triage color
|
| 602 |
+
triage_colors = {
|
| 603 |
+
"High": ("#ef4444", "#7f1d1d"),
|
| 604 |
+
"Medium": ("#f97316", "#431407"),
|
| 605 |
+
"Low": ("#22c55e", "#052e16"),
|
| 606 |
+
}
|
| 607 |
+
t_color, t_bg = triage_colors.get(triage, ("#22c55e", "#052e16"))
|
| 608 |
+
|
| 609 |
+
# Red-flag flashing banner
|
| 610 |
+
critical_banner = ""
|
| 611 |
+
if triage == "High":
|
| 612 |
+
critical_banner = f"""
|
| 613 |
+
<div style='animation:redflash 1s ease-in-out infinite;
|
| 614 |
+
background:#7f1d1d; border:2px solid #ef4444; border-radius:8px;
|
| 615 |
+
padding:14px 18px; margin-bottom:16px; text-align:center;'>
|
| 616 |
+
<span style='color:#fca5a5; font-weight:900; font-size:0.95rem; line-height:1.5;'>
|
| 617 |
+
{t['critical_warning']}
|
| 618 |
+
</span>
|
| 619 |
+
</div>"""
|
| 620 |
+
|
| 621 |
+
# Possible conditions chips
|
| 622 |
+
cond_chips = "".join(
|
| 623 |
+
f"<span style='background:#1e3a5f; color:#93c5fd; font-size:0.72rem; "
|
| 624 |
+
f"padding:3px 10px; border-radius:999px; border:1px solid #2563eb;'>{c}</span>"
|
| 625 |
+
for c in conditions
|
| 626 |
+
) if conditions else "<span style='color:#6b7280;'>—</span>"
|
| 627 |
+
|
| 628 |
+
# Patient message paragraphs
|
| 629 |
+
msg_html = "".join(
|
| 630 |
+
f"<p style='margin:0 0 8px; color:#d1d5db; line-height:1.6;'>{line}</p>"
|
| 631 |
+
for line in patient_msg.split("\n") if line.strip()
|
| 632 |
+
) if patient_msg else "<p style='color:#6b7280;'>—</p>"
|
| 633 |
+
|
| 634 |
return f"""
|
| 635 |
<div style='background:#111827; border:1px solid #ED1C24; border-radius:12px;
|
| 636 |
padding:20px; font-family:Arial,sans-serif; color:#f9fafb;'>
|
|
|
|
| 641 |
<div style='font-size:1.1rem; font-weight:700; color:#ED1C24;'>
|
| 642 |
MediVision {backend_tag}
|
| 643 |
</div>
|
| 644 |
+
<div style='font-size:0.75rem; color:#6b7280;'>AMD MI300X · ROCm · Qwen2.5-VL-7B · 3-Step Pipeline</div>
|
| 645 |
</div>
|
| 646 |
</div>
|
| 647 |
|
| 648 |
{_metrics_bar(metrics, t)}
|
| 649 |
+
{critical_banner}
|
| 650 |
|
| 651 |
<div style='background:#1f2937; border-radius:8px; padding:14px; margin-bottom:12px;'>
|
| 652 |
<div style='font-size:0.75rem; text-transform:uppercase; letter-spacing:.05em;
|
| 653 |
+
color:#9ca3af; margin-bottom:6px;'>{t['severity_label']}</div>
|
| 654 |
+
<span style='background:{t_bg}; color:{t_color}; font-weight:700;
|
| 655 |
+
padding:4px 16px; border-radius:999px; font-size:0.9rem;
|
| 656 |
+
border:2px solid {t_color};'>{triage}</span>
|
| 657 |
</div>
|
| 658 |
|
| 659 |
<div style='background:#1f2937; border-radius:8px; padding:14px; margin-bottom:12px;'>
|
| 660 |
<div style='font-size:0.75rem; text-transform:uppercase; letter-spacing:.05em;
|
| 661 |
+
color:#9ca3af; margin-bottom:8px;'>{t['conditions_label']}</div>
|
| 662 |
+
<div style='display:flex; flex-wrap:wrap; gap:6px;'>{cond_chips}</div>
|
|
|
|
|
|
|
|
|
|
|
|
|
| 663 |
</div>
|
| 664 |
|
| 665 |
<div style='background:#1f2937; border-radius:8px; padding:14px; margin-bottom:12px;'>
|
| 666 |
<div style='font-size:0.75rem; text-transform:uppercase; letter-spacing:.05em;
|
| 667 |
color:#9ca3af; margin-bottom:8px;'>{t['actions_label']}</div>
|
| 668 |
+
{msg_html}
|
|
|
|
|
|
|
| 669 |
</div>
|
| 670 |
|
| 671 |
<div style='background:#1a1a2e; border-left:4px solid #ED1C24; border-radius:4px;
|
|
|
|
| 677 |
"""
|
| 678 |
|
| 679 |
|
| 680 |
+
def _build_soap_html(soap_text: str, lang: str = "en") -> str:
|
| 681 |
+
t = _I18N.get(lang, _I18N["en"])
|
| 682 |
+
if not soap_text:
|
| 683 |
+
return (
|
| 684 |
+
f"<div style='color:#4b5563; text-align:center; padding:40px 0; font-size:0.9rem;'>"
|
| 685 |
+
f"{t['soap_empty']}</div>"
|
| 686 |
+
)
|
| 687 |
+
lines_html = "".join(
|
| 688 |
+
f"<div style='padding:3px 0; color:{'#ED1C24' if line.startswith('S ') or line.startswith('O ') or line.startswith('A ') or line.startswith('P ') else '#d1d5db'}; "
|
| 689 |
+
f"font-weight:{'700' if line[:2] in ('S ', 'O ', 'A ', 'P ') else '400'};'>{line}</div>"
|
| 690 |
+
for line in soap_text.split("\n") if line.strip()
|
| 691 |
+
)
|
| 692 |
+
return f"""
|
| 693 |
+
<div style='background:#0f172a; border:1px solid #1e3a5f; border-radius:12px;
|
| 694 |
+
padding:20px; font-family:monospace; font-size:0.82rem; line-height:1.7;'>
|
| 695 |
+
<div style='display:flex; justify-content:space-between; align-items:center; margin-bottom:14px;'>
|
| 696 |
+
<span style='color:#ED1C24; font-weight:700; font-size:0.9rem; font-family:sans-serif;'>
|
| 697 |
+
SOAP Clinical Note
|
| 698 |
+
</span>
|
| 699 |
+
<button onclick="navigator.clipboard.writeText(this.dataset.text).then(()=>this.textContent='{t['soap_copy_btn']} ✓').catch(()=>null)"
|
| 700 |
+
data-text="{soap_text.replace(chr(34), '"')}"
|
| 701 |
+
style='background:#1e3a5f; color:#93c5fd; border:1px solid #2563eb; border-radius:6px;
|
| 702 |
+
padding:4px 12px; cursor:pointer; font-size:0.72rem;'>
|
| 703 |
+
{t['soap_copy_btn']}
|
| 704 |
+
</button>
|
| 705 |
+
</div>
|
| 706 |
+
{lines_html}
|
| 707 |
+
</div>
|
| 708 |
+
"""
|
| 709 |
+
|
| 710 |
+
|
| 711 |
# ---------------------------------------------------------------------------
|
| 712 |
# UI update helpers
|
| 713 |
# ---------------------------------------------------------------------------
|
|
|
|
| 740 |
f"<p style='font-size:0.75rem; color:#6b7280; margin:4px 0 10px;'>{t['input_hint']}</p>"
|
| 741 |
)
|
| 742 |
return (
|
| 743 |
+
gr.update(label=t["img_label"], choices=[t["img_mode_standard"], t["img_mode_compare"]]),
|
| 744 |
+
gr.update(label=t["img_label_day1"]),
|
| 745 |
+
gr.update(label=t["img_label_dayx"]),
|
| 746 |
gr.update(label=t["symptoms_label"], placeholder=t["symptoms_placeholder"]),
|
| 747 |
gr.update(value=t["analyze_btn"]),
|
| 748 |
gr.update(label=t["region_optional_label"], choices=new_choices, value=translated),
|
|
|
|
| 797 |
def on_lang_change(lang_choice: str, image, symptoms: str, selected_regions):
|
| 798 |
lang = _LANG_MAP.get(lang_choice, "en")
|
| 799 |
t = _I18N[lang]
|
| 800 |
+
mode_upd, day1_upd, dayx_upd, sym_upd, btn_upd, region_upd, hint_upd = _ui_updates(
|
| 801 |
+
lang_choice, current_regions=selected_regions
|
| 802 |
+
)
|
| 803 |
|
| 804 |
region = _regions_to_prompt(selected_regions)
|
| 805 |
|
| 806 |
has_content = bool(image) or bool(symptoms and symptoms.strip())
|
| 807 |
if has_content:
|
| 808 |
try:
|
| 809 |
+
result = get_pipeline().process(image, None, (symptoms or "").strip(), lang=lang, region=region)
|
| 810 |
+
out_upd = _build_result_html(result, lang)
|
| 811 |
+
soap_upd = _build_soap_html(result.get("soap_note", ""), lang)
|
| 812 |
except Exception as exc:
|
| 813 |
+
out_upd = _error_html(t, exc)
|
| 814 |
+
soap_upd = _empty_soap_html(lang)
|
| 815 |
else:
|
| 816 |
+
out_upd = _empty_output_html(lang)
|
| 817 |
+
soap_upd = _empty_soap_html(lang)
|
| 818 |
|
| 819 |
+
return mode_upd, day1_upd, dayx_upd, sym_upd, btn_upd, region_upd, hint_upd, out_upd, soap_upd, get_backend_status_html(lang)
|
| 820 |
|
| 821 |
|
| 822 |
def on_load(request: gr.Request):
|
| 823 |
lang_display = _detect_lang_from_header(
|
| 824 |
request.headers.get("accept-language", "")
|
| 825 |
)
|
| 826 |
+
mode_upd, day1_upd, dayx_upd, sym_upd, btn_upd, region_upd, hint_upd = _ui_updates(
|
| 827 |
+
lang_display, current_regions=[]
|
| 828 |
+
)
|
| 829 |
lang = _LANG_MAP.get(lang_display, "en")
|
| 830 |
+
return (
|
| 831 |
+
lang_display,
|
| 832 |
+
mode_upd, day1_upd, dayx_upd,
|
| 833 |
+
sym_upd, btn_upd, region_upd, hint_upd,
|
| 834 |
+
_body_map_svg([], lang),
|
| 835 |
+
_empty_output_html(lang),
|
| 836 |
+
_empty_soap_html(lang),
|
| 837 |
+
get_backend_status_html(lang),
|
| 838 |
+
)
|
| 839 |
|
| 840 |
|
| 841 |
# ---------------------------------------------------------------------------
|
| 842 |
# Predict
|
| 843 |
# ---------------------------------------------------------------------------
|
| 844 |
|
| 845 |
+
def predict(image_1, image_2, symptoms: str, lang_choice: str, selected_regions):
|
| 846 |
lang = _LANG_MAP.get(lang_choice, "en")
|
| 847 |
t = _I18N[lang]
|
| 848 |
|
| 849 |
+
if not image_1 and not image_2 and not (symptoms or "").strip():
|
| 850 |
+
return _empty_output_html(lang), _empty_soap_html(lang), get_backend_status_html(lang)
|
| 851 |
|
| 852 |
region = _regions_to_prompt(selected_regions)
|
| 853 |
|
| 854 |
try:
|
| 855 |
+
result = get_pipeline().process(
|
| 856 |
+
image_1, image_2, (symptoms or "").strip(), lang=lang, region=region
|
| 857 |
+
)
|
| 858 |
+
return (
|
| 859 |
+
_build_result_html(result, lang),
|
| 860 |
+
_build_soap_html(result.get("soap_note", ""), lang),
|
| 861 |
+
get_backend_status_html(lang),
|
| 862 |
+
)
|
| 863 |
except Exception as exc:
|
| 864 |
+
return _error_html(t, exc), _empty_soap_html(lang), get_backend_status_html(lang)
|
| 865 |
|
| 866 |
|
| 867 |
# ---------------------------------------------------------------------------
|
|
|
|
| 919 |
letter-spacing: 0.04em;
|
| 920 |
}
|
| 921 |
footer { display: none !important; }
|
| 922 |
+
@keyframes redflash {
|
| 923 |
+
0%, 100% { opacity: 1; box-shadow: 0 0 12px rgba(239,68,68,0.6); }
|
| 924 |
+
50% { opacity: 0.7; box-shadow: 0 0 24px rgba(239,68,68,0.9); }
|
| 925 |
+
}
|
| 926 |
::-webkit-scrollbar { width: 6px; }
|
| 927 |
::-webkit-scrollbar-track { background: #111827; }
|
| 928 |
::-webkit-scrollbar-thumb { background: #374151; border-radius: 3px; }
|
|
|
|
| 1066 |
with gr.Row(equal_height=False):
|
| 1067 |
|
| 1068 |
with gr.Column(scale=1, min_width=300):
|
| 1069 |
+
img_mode = gr.Radio(
|
| 1070 |
+
choices=[_I18N["en"]["img_mode_standard"], _I18N["en"]["img_mode_compare"]],
|
| 1071 |
+
value=_I18N["en"]["img_mode_standard"],
|
| 1072 |
+
label=_I18N["en"]["img_mode_label"],
|
| 1073 |
+
elem_id="img-mode-radio",
|
| 1074 |
)
|
| 1075 |
+
with gr.Row(equal_height=True):
|
| 1076 |
+
input_img = gr.Image(
|
| 1077 |
+
type="filepath",
|
| 1078 |
+
label=_I18N["en"]["img_label_day1"],
|
| 1079 |
+
height=200,
|
| 1080 |
+
)
|
| 1081 |
+
input_img_2 = gr.Image(
|
| 1082 |
+
type="filepath",
|
| 1083 |
+
label=_I18N["en"]["img_label_dayx"],
|
| 1084 |
+
height=200,
|
| 1085 |
+
visible=False,
|
| 1086 |
+
)
|
| 1087 |
symptoms_txt = gr.Textbox(
|
| 1088 |
label="Symptoms Description",
|
| 1089 |
placeholder="Describe what you feel — e.g. itchy red patch for 3 days...",
|
|
|
|
| 1125 |
)
|
| 1126 |
|
| 1127 |
with gr.Column(scale=1, min_width=340):
|
| 1128 |
+
with gr.Tabs(elem_id="output-tabs"):
|
| 1129 |
+
with gr.TabItem(_I18N["en"]["tab_patient"], elem_id="tab-patient"):
|
| 1130 |
+
output_html = gr.HTML(value=_empty_output_html("en"))
|
| 1131 |
+
with gr.TabItem(_I18N["en"]["tab_doctor"], elem_id="tab-doctor"):
|
| 1132 |
+
soap_html = gr.HTML(value=_empty_soap_html("en"))
|
| 1133 |
|
| 1134 |
# ── Events ───────────────────────────────────────────────────────────────
|
| 1135 |
|
| 1136 |
+
# Image mode toggle: show/hide second image upload
|
| 1137 |
+
img_mode.change(
|
| 1138 |
+
fn=lambda m: gr.update(visible=_I18N["en"]["img_mode_compare"] in m),
|
| 1139 |
+
inputs=[img_mode],
|
| 1140 |
+
outputs=[input_img_2],
|
| 1141 |
+
)
|
| 1142 |
+
|
| 1143 |
# SVG click → toggle region in dropdown + re-render SVG
|
| 1144 |
svg_click_bridge.input(
|
| 1145 |
fn=on_svg_click,
|
|
|
|
| 1157 |
lang_radio.change(
|
| 1158 |
fn=on_lang_change,
|
| 1159 |
inputs=[lang_radio, input_img, symptoms_txt, region_selector],
|
| 1160 |
+
outputs=[img_mode, input_img, input_img_2, symptoms_txt, submit_btn,
|
| 1161 |
+
region_selector, input_hint_html, output_html, soap_html, status_bar],
|
| 1162 |
)
|
| 1163 |
|
| 1164 |
submit_btn.click(
|
| 1165 |
fn=predict,
|
| 1166 |
+
inputs=[input_img, input_img_2, symptoms_txt, lang_radio, region_selector],
|
| 1167 |
+
outputs=[output_html, soap_html, status_bar],
|
| 1168 |
api_name="analyze",
|
| 1169 |
)
|
| 1170 |
|
| 1171 |
demo.load(
|
| 1172 |
fn=on_load,
|
| 1173 |
inputs=[],
|
| 1174 |
+
outputs=[
|
| 1175 |
+
lang_radio,
|
| 1176 |
+
img_mode, input_img, input_img_2,
|
| 1177 |
+
symptoms_txt, submit_btn, region_selector, input_hint_html,
|
| 1178 |
+
body_map_html, output_html, soap_html, status_bar,
|
| 1179 |
+
],
|
| 1180 |
)
|
| 1181 |
|
| 1182 |
gr.HTML(FOOTER_HTML)
|
|
@@ -0,0 +1,64 @@
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|
| 1 |
+
import json
|
| 2 |
+
import re
|
| 3 |
+
|
| 4 |
+
from src.model_loader import generate_response, generate_text
|
| 5 |
+
from src.prompts import VISION_AGENT_SYSTEM, CLINICAL_AGENT_SYSTEM, FORMAT_AGENT_SYSTEM
|
| 6 |
+
|
| 7 |
+
_LANG_NAMES = {
|
| 8 |
+
"en": "English",
|
| 9 |
+
"vn": "Vietnamese",
|
| 10 |
+
"zh": "Simplified Chinese",
|
| 11 |
+
"es": "Spanish",
|
| 12 |
+
"fr": "French",
|
| 13 |
+
"ja": "Japanese",
|
| 14 |
+
}
|
| 15 |
+
|
| 16 |
+
|
| 17 |
+
def vision_agent(image_path_1, image_path_2, symptoms: str) -> tuple[str, dict]:
|
| 18 |
+
"""Step 1: strictly objective visual description. Returns (description_text, metrics)."""
|
| 19 |
+
two_images = bool(image_path_2)
|
| 20 |
+
user_msg = VISION_AGENT_SYSTEM + "\n\n"
|
| 21 |
+
if two_images:
|
| 22 |
+
user_msg += "TWO images are provided: the first image is Day 1, the second image is Day X.\n\n"
|
| 23 |
+
user_msg += f"Patient symptom text: {symptoms or '(none provided)'}"
|
| 24 |
+
return generate_response(user_msg, image_path=image_path_1 or None,
|
| 25 |
+
image_path_2=image_path_2 or None)
|
| 26 |
+
|
| 27 |
+
|
| 28 |
+
def clinical_agent(visual_description: str, symptoms: str) -> tuple[dict, dict]:
|
| 29 |
+
"""Step 2: clinical reasoning → strict JSON. Returns (parsed_dict, metrics)."""
|
| 30 |
+
prompt = (
|
| 31 |
+
CLINICAL_AGENT_SYSTEM + "\n\n"
|
| 32 |
+
f"VISUAL DESCRIPTION:\n{visual_description}\n\n"
|
| 33 |
+
f"PATIENT SYMPTOMS:\n{symptoms or '(none provided)'}"
|
| 34 |
+
)
|
| 35 |
+
raw, metrics = generate_text(prompt)
|
| 36 |
+
match = re.search(r'\{.*\}', raw, re.DOTALL)
|
| 37 |
+
if not match:
|
| 38 |
+
raise ValueError(f"Clinical agent did not return JSON: {raw[:300]}")
|
| 39 |
+
data = json.loads(match.group())
|
| 40 |
+
return {
|
| 41 |
+
"triage_level": data.get("triage_level", "Low"),
|
| 42 |
+
"possible_conditions": data.get("possible_conditions", []),
|
| 43 |
+
"clinical_assessment": data.get("clinical_assessment", ""),
|
| 44 |
+
"recommendation": data.get("recommendation", ""),
|
| 45 |
+
}, metrics
|
| 46 |
+
|
| 47 |
+
|
| 48 |
+
def format_agent(clinical_json: dict, visual_description: str,
|
| 49 |
+
symptoms: str, lang: str) -> tuple[str, str, dict]:
|
| 50 |
+
"""Step 3: patient-friendly message + SOAP note. Returns (patient_msg, soap_text, metrics)."""
|
| 51 |
+
lang_name = _LANG_NAMES.get(lang, "English")
|
| 52 |
+
prompt = (
|
| 53 |
+
FORMAT_AGENT_SYSTEM + "\n\n"
|
| 54 |
+
f"TARGET LANGUAGE: {lang_name}\n\n"
|
| 55 |
+
f"PATIENT ORIGINAL COMPLAINT: {symptoms or '(none)'}\n\n"
|
| 56 |
+
f"VISUAL DESCRIPTION (Objective):\n{visual_description}\n\n"
|
| 57 |
+
f"CLINICAL JSON:\n{json.dumps(clinical_json, ensure_ascii=False, indent=2)}"
|
| 58 |
+
)
|
| 59 |
+
raw, metrics = generate_text(prompt)
|
| 60 |
+
if "===SOAP===" in raw:
|
| 61 |
+
patient_msg, soap = raw.split("===SOAP===", 1)
|
| 62 |
+
else:
|
| 63 |
+
patient_msg, soap = raw, ""
|
| 64 |
+
return patient_msg.strip(), soap.strip(), metrics
|
|
@@ -1,18 +1,37 @@
|
|
| 1 |
-
from src.
|
| 2 |
|
| 3 |
|
| 4 |
class MediVisionPipeline:
|
| 5 |
-
def process(self,
|
|
|
|
| 6 |
"""
|
| 7 |
-
Run the
|
| 8 |
-
|
|
|
|
|
|
|
| 9 |
|
| 10 |
-
Returns:
|
| 11 |
-
|
|
|
|
| 12 |
"""
|
| 13 |
-
|
| 14 |
-
|
| 15 |
-
|
| 16 |
-
|
| 17 |
-
|
| 18 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
from src.agents import vision_agent, clinical_agent, format_agent
|
| 2 |
|
| 3 |
|
| 4 |
class MediVisionPipeline:
|
| 5 |
+
def process(self, image_path_1, image_path_2, symptoms: str,
|
| 6 |
+
lang: str = "en", region: str = "") -> dict:
|
| 7 |
"""
|
| 8 |
+
Run the 3-step agentic pipeline:
|
| 9 |
+
Step 1 — Vision Agent: objective visual description
|
| 10 |
+
Step 2 — Clinical Agent: triage JSON
|
| 11 |
+
Step 3 — Format Agent: patient message + SOAP note
|
| 12 |
|
| 13 |
+
Returns dict with keys:
|
| 14 |
+
triage_level, possible_conditions, patient_message,
|
| 15 |
+
soap_note, visual_description, _metrics
|
| 16 |
"""
|
| 17 |
+
symptoms_full = f"{'Region: ' + region + '. ' if region else ''}{symptoms}"
|
| 18 |
+
|
| 19 |
+
visual_desc, m1 = vision_agent(image_path_1, image_path_2, symptoms_full)
|
| 20 |
+
clinical, m2 = clinical_agent(visual_desc, symptoms_full)
|
| 21 |
+
patient_msg, soap, m3 = format_agent(clinical, visual_desc, symptoms_full, lang)
|
| 22 |
+
|
| 23 |
+
metrics = {
|
| 24 |
+
"latency_ms": m1["latency_ms"] + m2["latency_ms"] + m3["latency_ms"],
|
| 25 |
+
"total_tokens": m1["total_tokens"] + m2["total_tokens"] + m3["total_tokens"],
|
| 26 |
+
"tokens_per_sec": round(
|
| 27 |
+
(m1.get("tokens_per_sec", 0) + m2.get("tokens_per_sec", 0) + m3.get("tokens_per_sec", 0)) / 3, 1
|
| 28 |
+
),
|
| 29 |
+
}
|
| 30 |
+
return {
|
| 31 |
+
"triage_level": clinical["triage_level"],
|
| 32 |
+
"possible_conditions": clinical["possible_conditions"],
|
| 33 |
+
"patient_message": patient_msg,
|
| 34 |
+
"soap_note": soap,
|
| 35 |
+
"visual_description": visual_desc,
|
| 36 |
+
"_metrics": metrics,
|
| 37 |
+
}
|
|
@@ -62,9 +62,11 @@ def check_connection() -> tuple[bool, str]:
|
|
| 62 |
return False, f"{type(exc).__name__}: {exc}"
|
| 63 |
|
| 64 |
|
| 65 |
-
def generate_response(prompt: str, image_path: str = None
|
|
|
|
| 66 |
"""
|
| 67 |
Send a request to the vLLM endpoint and return (text_output, metrics).
|
|
|
|
| 68 |
|
| 69 |
metrics keys:
|
| 70 |
latency_ms – wall-clock time for the API call in milliseconds
|
|
@@ -76,20 +78,18 @@ def generate_response(prompt: str, image_path: str = None) -> tuple[str, dict]:
|
|
| 76 |
try:
|
| 77 |
client = _get_client()
|
| 78 |
|
| 79 |
-
if image_path:
|
| 80 |
-
|
| 81 |
-
|
| 82 |
-
|
| 83 |
-
|
| 84 |
-
|
| 85 |
-
|
| 86 |
-
|
| 87 |
-
|
| 88 |
-
|
| 89 |
-
|
| 90 |
-
|
| 91 |
-
}
|
| 92 |
-
]
|
| 93 |
else:
|
| 94 |
messages = [{"role": "user", "content": prompt}]
|
| 95 |
|
|
@@ -116,3 +116,8 @@ def generate_response(prompt: str, image_path: str = None) -> tuple[str, dict]:
|
|
| 116 |
|
| 117 |
except Exception as exc:
|
| 118 |
raise RuntimeError(f"AMD Cloud backend unreachable: {exc}") from exc
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 62 |
return False, f"{type(exc).__name__}: {exc}"
|
| 63 |
|
| 64 |
|
| 65 |
+
def generate_response(prompt: str, image_path: str = None,
|
| 66 |
+
image_path_2: str = None) -> tuple[str, dict]:
|
| 67 |
"""
|
| 68 |
Send a request to the vLLM endpoint and return (text_output, metrics).
|
| 69 |
+
Supports 0, 1, or 2 images (image_path_2 for A/B comparison).
|
| 70 |
|
| 71 |
metrics keys:
|
| 72 |
latency_ms – wall-clock time for the API call in milliseconds
|
|
|
|
| 78 |
try:
|
| 79 |
client = _get_client()
|
| 80 |
|
| 81 |
+
if image_path or image_path_2:
|
| 82 |
+
content = []
|
| 83 |
+
if image_path:
|
| 84 |
+
b64, mime = _encode_image(image_path)
|
| 85 |
+
content.append({"type": "image_url",
|
| 86 |
+
"image_url": {"url": f"data:{mime};base64,{b64}"}})
|
| 87 |
+
if image_path_2:
|
| 88 |
+
b64, mime = _encode_image(image_path_2)
|
| 89 |
+
content.append({"type": "image_url",
|
| 90 |
+
"image_url": {"url": f"data:{mime};base64,{b64}"}})
|
| 91 |
+
content.append({"type": "text", "text": prompt})
|
| 92 |
+
messages = [{"role": "user", "content": content}]
|
|
|
|
|
|
|
| 93 |
else:
|
| 94 |
messages = [{"role": "user", "content": prompt}]
|
| 95 |
|
|
|
|
| 116 |
|
| 117 |
except Exception as exc:
|
| 118 |
raise RuntimeError(f"AMD Cloud backend unreachable: {exc}") from exc
|
| 119 |
+
|
| 120 |
+
|
| 121 |
+
def generate_text(prompt: str) -> tuple[str, dict]:
|
| 122 |
+
"""Text-only call — same endpoint as generate_response(), no image encoding."""
|
| 123 |
+
return generate_response(prompt, image_path=None)
|
|
@@ -0,0 +1,53 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
VISION_AGENT_SYSTEM = """You are a medical imaging assistant performing STRICTLY OBJECTIVE visual analysis.
|
| 2 |
+
Do NOT diagnose. Do NOT give medical advice. Do NOT speculate on conditions.
|
| 3 |
+
Your ONLY job: describe exactly what you see in the image(s) using clinical descriptive language.
|
| 4 |
+
|
| 5 |
+
If ONE image is provided, describe:
|
| 6 |
+
- Lesion size (estimated), shape, border characteristics
|
| 7 |
+
- Color(s), texture, surface features (scaling, crusting, ulceration, exudate)
|
| 8 |
+
- Surrounding skin condition
|
| 9 |
+
- Any signs of inflammation, swelling, or structural abnormality
|
| 10 |
+
|
| 11 |
+
If TWO images are provided (Day 1 vs Day X), describe BOTH images separately, then compare:
|
| 12 |
+
- Changes in size (larger / smaller / same)
|
| 13 |
+
- Changes in color or border definition
|
| 14 |
+
- Changes in surface features (scaling, crusting, exudate)
|
| 15 |
+
- Overall progression verdict: IMPROVED / UNCHANGED / WORSENED
|
| 16 |
+
|
| 17 |
+
Output: plain text only. No JSON. No diagnosis. No recommendations."""
|
| 18 |
+
|
| 19 |
+
CLINICAL_AGENT_SYSTEM = """You are a clinical reasoning engine for a dermatology triage system.
|
| 20 |
+
You receive: (1) an objective visual description and (2) the patient's symptom text.
|
| 21 |
+
You perform clinical reasoning and output ONLY a JSON object — no extra text, no markdown fences.
|
| 22 |
+
|
| 23 |
+
JSON schema (strict):
|
| 24 |
+
{
|
| 25 |
+
"triage_level": "High" | "Medium" | "Low",
|
| 26 |
+
"possible_conditions": ["condition 1", "condition 2"],
|
| 27 |
+
"clinical_assessment": "brief medical reasoning (2-3 sentences max)",
|
| 28 |
+
"recommendation": "immediate actions or home care advice (2-4 sentences)"
|
| 29 |
+
}
|
| 30 |
+
|
| 31 |
+
triage_level rules:
|
| 32 |
+
- "High": suspected melanoma, necrosis, severe cellulitis, rapidly spreading infection, deep burn
|
| 33 |
+
- "Medium": moderate infection signs, non-healing wound >2 weeks, significant inflammation
|
| 34 |
+
- "Low": minor abrasion, mild rash, superficial wound with no infection signs
|
| 35 |
+
|
| 36 |
+
Return ONLY the JSON object. No explanation before or after."""
|
| 37 |
+
|
| 38 |
+
FORMAT_AGENT_SYSTEM = """You are a medical communication specialist. You receive clinical data and
|
| 39 |
+
format it into two outputs separated by the EXACT delimiter line: ===SOAP===
|
| 40 |
+
|
| 41 |
+
Output structure (follow exactly):
|
| 42 |
+
[PATIENT section — warm, empathetic, easy-to-understand message in the TARGET LANGUAGE]
|
| 43 |
+
===SOAP===
|
| 44 |
+
S (Subjective): [patient's original complaint, verbatim or close paraphrase]
|
| 45 |
+
O (Objective): [1-2 sentence summary of the visual description]
|
| 46 |
+
A (Assessment): [possible conditions and brief clinical reasoning]
|
| 47 |
+
P (Plan): [recommended actions from clinical assessment]
|
| 48 |
+
|
| 49 |
+
Rules:
|
| 50 |
+
- Patient section: non-technical language, supportive tone, in the TARGET LANGUAGE specified
|
| 51 |
+
- SOAP section: professional clinical English regardless of target language
|
| 52 |
+
- Do NOT add any text outside this structure
|
| 53 |
+
- Do NOT add a header or title line before the patient section"""
|