merolav-space / app.py
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"""Plant Disease Assistant β€” Hugging Face Space (CPU, DINOv2-only).
Loads the DINOv2-L checkpoint from a HF model repo at startup, then runs
classification + template-based responses from a bundled knowledge file.
Configurable via environment variables:
DINOV2_REPO HF model repo containing best.pt and splits.json
(default: iamcode6/dinov2-l-ccmt-mi300x)
DINOV2_CKPT Filename of the checkpoint inside the repo
(default: best.pt)
"""
from __future__ import annotations
import json
import os
from pathlib import Path
import gradio as gr
import numpy as np
import timm
import torch
import torch.nn.functional as F
from huggingface_hub import hf_hub_download
from PIL import Image
from timm.data import create_transform
HERE = Path(__file__).parent
KNOWLEDGE_PATH = HERE / "treatment_knowledge.json"
SPLITS_PATH = HERE / "splits.json"
DINOV2_REPO = os.environ.get("DINOV2_REPO", "iamcode6/dinov2-l-ccmt-mi300x")
DINOV2_CKPT = os.environ.get("DINOV2_CKPT", "best.pt")
DEVICE = "cpu"
class PlantClassifier:
def __init__(self, checkpoint_path: Path, splits_path: Path):
self.device = torch.device(DEVICE)
splits = json.loads(splits_path.read_text())
self.idx_to_class = {v: k for k, v in splits["class_to_idx"].items()}
self.class_names = [self.idx_to_class[i] for i in range(len(self.idx_to_class))]
self.num_classes = len(self.class_names)
ckpt = torch.load(checkpoint_path, map_location="cpu", weights_only=False)
if isinstance(ckpt, dict) and "state_dict" in ckpt:
state_dict = ckpt["state_dict"]
cfg = ckpt.get("cfg", {})
else:
state_dict = ckpt
cfg = {}
state_dict = {k.replace("_orig_mod.", "", 1): v for k, v in state_dict.items()}
model_name = cfg.get("model", {}).get("name", "vit_large_patch14_dinov2.lvd142m")
img_size = cfg.get("model", {}).get("img_size", 224)
self.model = timm.create_model(
model_name, pretrained=False,
num_classes=self.num_classes, img_size=img_size,
)
self.model.load_state_dict(state_dict)
self.model.to(self.device).eval()
self.transform = create_transform(
input_size=img_size, is_training=False,
mean=(0.485, 0.456, 0.406), std=(0.229, 0.224, 0.225),
interpolation="bicubic", crop_pct=0.95,
)
@torch.no_grad()
def predict(self, image: Image.Image, top_k: int = 3) -> list[dict]:
x = self.transform(image).unsqueeze(0).to(self.device)
logits = self.model(x)
probs = F.softmax(logits, dim=-1).squeeze(0).float().cpu().numpy()
top_indices = np.argsort(probs)[::-1][:top_k]
return [
{"class": self.class_names[i], "confidence": float(probs[i]), "index": int(i)}
for i in top_indices
]
class KnowledgeResponder:
def __init__(self, path: Path):
self.knowledge = json.loads(path.read_text())
def format_label(self, label: str) -> str:
return label.replace("_", " ").title()
def respond(self, predictions: list[dict]) -> str:
top = predictions[0]
label = top["class"]
confidence = top["confidence"]
if label not in self.knowledge:
return (
f"**Prediction:** {self.format_label(label)} "
f"(confidence: {confidence:.1%})\n\n"
"No detailed information available for this condition."
)
k = self.knowledge[label]
is_healthy = k["disease"] == "Healthy"
lines = []
if is_healthy:
lines.append(f"## {k['crop']} β€” Healthy")
lines.append(f"**Confidence:** {confidence:.1%}\n")
lines.append(f"{k['symptoms']}")
lines.append("\nKeep monitoring regularly and continue your current care routine.")
else:
lines.append(f"## {k['crop']} β€” {k['disease']}")
lines.append(f"**Confidence:** {confidence:.1%}\n")
if k.get("pathogen"):
lines.append(f"**Pathogen:** *{k['pathogen']}*\n")
lines.append("### Symptoms")
lines.append(f"{k['symptoms']}\n")
lines.append("### Severity Guide")
for level, desc in k["severity_cues"].items():
lines.append(f"- **{level.title()}:** {desc}")
lines.append("")
lines.append("### Treatment")
lines.append(f"{k['treatment']}\n")
lines.append("### Prevention")
lines.append(f"{k['prevention']}")
if len(predictions) > 1:
lines.append("\n---\n### Other Possibilities")
for p in predictions[1:]:
if p["confidence"] > 0.05:
lines.append(f"- {self.format_label(p['class'])} ({p['confidence']:.1%})")
return "\n".join(lines)
print(f"[app] Downloading DINOv2-L checkpoint from {DINOV2_REPO}...")
checkpoint_path = Path(hf_hub_download(repo_id=DINOV2_REPO, filename=DINOV2_CKPT))
print("[app] Loading classifier on CPU (~30s)...")
classifier = PlantClassifier(checkpoint_path, SPLITS_PATH)
print(f"[app] Loaded {classifier.num_classes} classes")
knowledge = KnowledgeResponder(KNOWLEDGE_PATH)
def diagnose(image: Image.Image | None):
if image is None:
return "Please upload an image.", ""
image = image.convert("RGB")
predictions = classifier.predict(image, top_k=3)
table = "**DINOv2-L Classification (97% accuracy)**\n\n"
table += "| Rank | Disease | Confidence |\n"
table += "|------|---------|------------|\n"
for i, p in enumerate(predictions):
marker = " ←" if i == 0 else ""
table += (
f"| {i+1} | {knowledge.format_label(p['class'])} | "
f"{p['confidence']:.1%}{marker} |\n"
)
return table, knowledge.respond(predictions)
CUSTOM_CSS = """
.prose, .prose *, [class*="markdown"], [class*="markdown"] * {
color: #1a1a1a !important;
opacity: 1 !important;
}
.prose strong, .prose h1, .prose h2, .prose h3 {
color: #000 !important;
font-weight: 700 !important;
}
.dark .prose, .dark .prose *,
.dark [class*="markdown"], .dark [class*="markdown"] * {
color: #f5f5f5 !important;
}
.dark .prose strong, .dark .prose h1, .dark .prose h2, .dark .prose h3 {
color: #ffffff !important;
}
.prose table { border-collapse: collapse; }
.prose th, .prose td { padding: 6px 10px; border: 1px solid #888; }
"""
with gr.Blocks(title="Plant Disease Assistant", css=CUSTOM_CSS) as app:
gr.Markdown(
"# 🌱 Plant Disease Assistant\n"
"Upload a photo of a plant leaf to get an instant diagnosis, "
"severity assessment, and treatment recommendations.\n\n"
"*DINOv2-Large fine-tuned on AMD Instinct MI300X (ROCm) β€” "
"97.06% accuracy on the CCMT crop disease dataset.*"
)
with gr.Row():
with gr.Column(scale=1):
image_input = gr.Image(type="pil", label="Upload a plant leaf photo")
diagnose_btn = gr.Button("Diagnose", variant="primary", size="lg")
example_paths = sorted(str(p) for p in (HERE / "examples").glob("*.jpg"))
if example_paths:
gr.Examples(
examples=[[p] for p in example_paths],
inputs=image_input,
label="Or try one of these (click a thumbnail)",
examples_per_page=11,
)
with gr.Column(scale=2):
classification_output = gr.Markdown()
response_output = gr.Markdown()
diagnose_btn.click(
fn=diagnose, inputs=image_input,
outputs=[classification_output, response_output],
)
image_input.change(
fn=diagnose, inputs=image_input,
outputs=[classification_output, response_output],
)
gr.Markdown(
"---\n"
"**Model:** DINOv2-Large (304M params) β€” 97.06% accuracy, 0.9713 macro F1\n\n"
"**Hardware:** Fine-tuned on AMD Instinct MI300X (192 GB HBM3) via AMD Developer Cloud\n\n"
"**Dataset:** CCMT Crop Pest and Disease Detection β€” 22 classes across cashew, cassava, maize, and tomato\n\n"
"*Built for the lablab.ai AMD Developer Hackathon*"
)
if __name__ == "__main__":
app.launch(server_name="0.0.0.0", server_port=7860, show_api=False)