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"""
AlgaeGuard — Autonomous HAB Detection from Orbit
HuggingFace Spaces Gradio Application
Tabs:
1. Live Demo — preset NDCI colormaps + optional VLM inference
2. HAB Timeline — historical bloom severity charts for 6 water bodies
3. Custom Inference — upload image or fetch live from SimSat by coordinates
4. About — project summary and links
"""
from __future__ import annotations
import base64
import csv
import json
import os
import re
from datetime import datetime
from pathlib import Path
from typing import Optional
import cv2
import gradio as gr
import numpy as np
import plotly.graph_objects as go
import requests
from PIL import Image
# ── ZeroGPU (HF Spaces) — optional ────────────────────────────────────────────
try:
import spaces
HAS_SPACES = True
except ImportError:
HAS_SPACES = False
# ── Paths ──────────────────────────────────────────────────────────────────────
ROOT = Path(__file__).parent
DATA_DIR = ROOT / "data"
EXAMPLES_DIR = ROOT / "examples"
# ── Constants ──────────────────────────────────────────────────────────────────
MODEL_ID = "debrajsingha/algaeguard-lfm2-5-vl-450m"
SYSTEM_PROMPT = (
"You are AlgaeGuard, an autonomous on-board satellite AI for Harmful Algal Bloom "
"(HAB) early-warning using Sentinel-2 NDCI imagery. You analyze NDCI colormap images "
"and produce structured bloom assessments for water utility operators. Your assessments "
"guide 6–12 hour treatment protocol decisions — be precise, actionable, and structured."
)
HAB_LOCATIONS = [
{"name": "lake_erie", "display": "Lake Erie (USA)", "lat": 41.66, "lon": -83.55},
{"name": "lake_taihu", "display": "Lake Taihu (China)", "lat": 31.20, "lon": 120.00},
{"name": "chesapeake_bay", "display": "Chesapeake Bay (USA)", "lat": 38.50, "lon": -76.40},
{"name": "okeechobee", "display": "Lake Okeechobee (USA)", "lat": 26.90, "lon": -80.80},
{"name": "curonian", "display": "Curonian Lagoon (Lithuania)","lat": 55.40, "lon": 21.10},
{"name": "murray_darling", "display": "Murray-Darling (Australia)", "lat": -34.10, "lon": 141.90},
]
LOC_DISPLAY = {l["name"]: l["display"] for l in HAB_LOCATIONS}
LOC_BY_KEY = {l["name"]: l for l in HAB_LOCATIONS}
SEVERITY_CFG = {
"CLEAR": {"color": "#4ade80", "bg": "#052e16", "emoji": "✅", "action": "No action required"},
"LOW": {"color": "#a3e635", "bg": "#1a2e05", "emoji": "🟡", "action": "Monitor — rescan next pass"},
"MEDIUM": {"color": "#facc15", "bg": "#2d2000", "emoji": "🟠", "action": "Issue caution advisory to water utility"},
"HIGH": {"color": "#f97316", "bg": "#2d0c00", "emoji": "🔴", "action": "Alert water utility — activate response"},
"CRITICAL": {"color": "#ef4444", "bg": "#1c0000", "emoji": "🚨", "action": "IMMEDIATE ACTION — emergency protocol"},
}
SEVERITY_ORDER = ["CLEAR", "LOW", "MEDIUM", "HIGH", "CRITICAL"]
REAL_WORLD_EVENTS = [
{"location": "lake_erie", "date": "2014-08-02", "label": "Toledo Crisis 2014", "severity": "CRITICAL",
"desc": "400,000 residents lost safe water for 3 days. Bloom visible 2 weeks earlier in Sentinel-2 data."},
{"location": "lake_erie", "date": "2019-07-15", "label": "Erie Bloom 2019", "severity": "HIGH",
"desc": "620 sq mile bloom — largest ever recorded on Lake Erie at the time."},
{"location": "lake_taihu", "date": "2007-05-29", "label": "Taihu Crisis 2007", "severity": "CRITICAL",
"desc": "Tap water cut for 2M residents in Wuxi, China. Cyanobacteria toxin levels 1000× safe limit."},
{"location": "okeechobee", "date": "2018-08-01", "label": "Florida Emergency", "severity": "CRITICAL",
"desc": "Governor declared state of emergency. Toxic algae spread to Atlantic and Gulf coasts."},
{"location": "chesapeake_bay", "date": "2011-07-01", "label": "Chesapeake Dead Zone","severity": "HIGH",
"desc": "Record dead zone — 1.91 cubic miles of hypoxic water. Massive fish and shellfish kills."},
{"location": "murray_darling", "date": "2010-01-10", "label": "Murray-Darling 2010","severity": "CRITICAL",
"desc": "Largest bloom ever recorded — cyanobacteria stretched 1,000 km along the river system."},
]
# ── Load timeseries ────────────────────────────────────────────────────────────
def _load_timeseries() -> dict:
ts_path = DATA_DIR / "timeseries.json"
if ts_path.exists():
return json.loads(ts_path.read_text())
# fallback: build from CSV
csv_path = DATA_DIR / "processed_index.csv"
if not csv_path.exists():
return {}
from collections import defaultdict
ts: dict = defaultdict(list)
for row in csv.DictReader(open(csv_path)):
stem = row["stem"]
m = re.search(r"(\d{4}-\d{2}-\d{2})$", stem)
if not m:
continue
date = m.group(1)
loc = stem[: m.start()].rstrip("_")
ts[loc].append({
"date": date, "severity": row["severity"],
"ndci_mean": round(float(row["ndci_mean"]), 4),
"ndci_max": round(float(row["ndci_max"]), 4),
"bloom_pct": round(float(row["bloom_pct"]), 2),
"severe_pct":round(float(row["severe_pct"]), 2),
"image": f"{stem}_cmap.png",
})
for loc in ts:
ts[loc].sort(key=lambda x: x["date"])
return dict(ts)
TIMESERIES = _load_timeseries()
# ── Model (lazy-loaded) ────────────────────────────────────────────────────────
_processor = None
_model = None
def _load_model():
global _processor, _model
if _model is not None:
return _processor, _model
import torch
from transformers import AutoModelForImageTextToText, AutoProcessor
print(f"Loading {MODEL_ID} ...")
_processor = AutoProcessor.from_pretrained(MODEL_ID, trust_remote_code=True)
dtype = torch.bfloat16 if torch.cuda.is_available() else torch.float32
_model = AutoModelForImageTextToText.from_pretrained(
MODEL_ID, torch_dtype=dtype, device_map="auto", trust_remote_code=True
)
_model.eval()
print(f"✅ Model ready on {next(_model.parameters()).device}")
return _processor, _model
# ── Spectral helpers ───────────────────────────────────────────────────────────
def _ndci_from_bands(bands: np.ndarray) -> np.ndarray:
"""bands: (H, W, ≥2) float32 — channel 0 = B04 red, channel 1 = B05 rededge"""
B04, B05 = bands[:, :, 0], bands[:, :, 1]
return (B05 - B04) / (B05 + B04 + 1e-8)
def _ndci_to_colormap(ndci_map: np.ndarray, size: int = 512) -> np.ndarray:
"""Returns BGR uint8 (H, W, 3)"""
clipped = np.clip(np.nan_to_num(ndci_map, nan=0.0), -1.0, 1.0)
norm = ((clipped + 1) / 2 * 255).astype(np.uint8)
cmap = cv2.applyColorMap(norm, cv2.COLORMAP_JET)
if cmap.shape[0] != size:
cmap = cv2.resize(cmap, (size, size), interpolation=cv2.INTER_LINEAR)
return cmap
def _classify_bloom(ndci_map: np.ndarray) -> dict:
valid = ndci_map[~np.isnan(ndci_map)] if np.isnan(ndci_map).any() else ndci_map.ravel()
if len(valid) == 0:
return {"severity": "CLEAR", "ndci_mean": 0.0, "ndci_max": 0.0,
"bloom_pct": 0.0, "severe_pct": 0.0}
bloom_pct = float((valid > 0.10).mean() * 100)
severe_pct = float((valid > 0.25).mean() * 100)
if severe_pct > 15: severity = "CRITICAL"
elif bloom_pct > 25: severity = "HIGH"
elif bloom_pct > 8: severity = "MEDIUM"
elif bloom_pct > 1: severity = "LOW"
else: severity = "CLEAR"
return {
"severity": severity,
"ndci_mean": float(np.nanmean(ndci_map)),
"ndci_max": float(np.nanmax(ndci_map)),
"bloom_pct": bloom_pct,
"severe_pct": severe_pct,
}
# ── VLM inference ──────────────────────────────────────────────────────────────
def _do_inference(pil_img: Image.Image, location: str, date: str,
ndci_mean: float, bloom_pct: float) -> str:
import torch
processor, model = _load_model()
user_text = (
f"Location: {location}\nDate: {date}\n"
f"NDCI Mean: {ndci_mean:.3f} | Bloom Coverage: {bloom_pct:.1f}%\n\n"
"Classification thresholds:\n"
" CLEAR <1% | LOW 1–8% | MEDIUM 8–25% | HIGH >25% | CRITICAL if severe_pct >15%\n\n"
"Analyze this Sentinel-2 NDCI colormap and issue an AlgaeGuard bloom assessment."
)
messages = [
{"role": "system", "content": SYSTEM_PROMPT},
{"role": "user", "content": [
{"type": "image"},
{"type": "text", "text": user_text},
]},
]
text = processor.apply_chat_template(messages, add_generation_prompt=True)
inputs = processor(text=text, images=[pil_img], return_tensors="pt").to(
next(model.parameters()).device
)
with torch.no_grad():
out = model.generate(**inputs, max_new_tokens=350, do_sample=False,
temperature=None, top_p=None)
return processor.decode(out[0, inputs["input_ids"].shape[1]:], skip_special_tokens=True)
if HAS_SPACES:
run_vlm = spaces.GPU(_do_inference)
else:
run_vlm = _do_inference
# ── SimSat fetch ───────────────────────────────────────────────────────────────
def _fetch_simsat(lat: float, lon: float, date: str) -> Optional[tuple[np.ndarray, dict]]:
url = os.environ.get("SIMSAT_API_URL", "").rstrip("/")
if not url:
return None
params = {
"lat": lat, "lon": lon,
"timestamp": f"{date}T12:00:00",
"spectral_bands": ["red", "rededge", "nir", "green", "blue"],
"size_km": 10.0, "return_type": "array", "window_seconds": 864000,
}
try:
r = requests.get(f"{url}/data/image/sentinel", params=params, timeout=60)
r.raise_for_status()
data = r.json()
except Exception as e:
print(f"SimSat error: {e}")
return None
meta = data.get("sentinel_metadata", {})
if not meta.get("image_available"):
return None
img_block = data["image"]
raw = base64.b64decode(img_block["image"])
shape = img_block["metadata"]["shape"]
dtype = np.dtype(img_block["metadata"]["dtype"])
bands = np.frombuffer(raw, dtype=dtype).reshape(shape).astype(np.float32)
bands = np.moveaxis(bands, 0, -1) # (H, W, 5)
ndci_map = _ndci_from_bands(bands)
return ndci_map, _classify_bloom(ndci_map)
# ── HTML helpers ───────────────────────────────────────────────────────────────
def _alert_card(severity: str, bloom_pct: float, ndci_mean: float, ndci_max: float,
location: str, date: str, vlm_text: str = "", source: str = "") -> str:
c = SEVERITY_CFG[severity]
vlm_block = (
f'<div style="margin-top:14px;background:#0d0d1a;border-radius:8px;padding:14px;'
f'color:#ccc;white-space:pre-wrap;font-size:0.88em;line-height:1.6">'
f'{vlm_text}</div>'
) if vlm_text else ""
src_badge = (
f'<span style="font-size:0.75em;color:#888;margin-left:8px">[{source}]</span>'
) if source else ""
return f"""
<div style="background:#0a0a0f;border:1px solid {c['color']}55;border-radius:12px;
padding:20px;font-family:'Courier New',monospace;color:#eee">
<div style="display:flex;justify-content:space-between;align-items:flex-start;margin-bottom:16px">
<div>
<div style="color:#666;font-size:0.72em;text-transform:uppercase;letter-spacing:2px">
AlgaeGuard · Sentinel-2 Assessment</div>
<div style="color:#fff;font-size:1.05em;margin-top:2px">{location}{src_badge}</div>
<div style="color:#888;font-size:0.85em">{date}</div>
</div>
<div style="padding:10px 18px;border-radius:8px;background:{c['bg']};
border:2px solid {c['color']};font-size:1.4em;font-weight:bold;
color:{c['color']};white-space:nowrap">
{c['emoji']} {severity}
</div>
</div>
<div style="display:grid;grid-template-columns:1fr 1fr 1fr;gap:10px;margin-bottom:14px">
<div style="background:#111;border-radius:8px;padding:12px;text-align:center">
<div style="color:#666;font-size:0.72em;text-transform:uppercase">Bloom Coverage</div>
<div style="color:{c['color']};font-size:1.9em;font-weight:bold;margin-top:4px">{bloom_pct:.1f}%</div>
</div>
<div style="background:#111;border-radius:8px;padding:12px;text-align:center">
<div style="color:#666;font-size:0.72em;text-transform:uppercase">NDCI Mean</div>
<div style="color:#60a5fa;font-size:1.9em;font-weight:bold;margin-top:4px">{ndci_mean:.3f}</div>
</div>
<div style="background:#111;border-radius:8px;padding:12px;text-align:center">
<div style="color:#666;font-size:0.72em;text-transform:uppercase">NDCI Max</div>
<div style="color:#60a5fa;font-size:1.9em;font-weight:bold;margin-top:4px">{ndci_max:.3f}</div>
</div>
</div>
<div style="background:{c['bg']};border-left:4px solid {c['color']};
padding:10px 14px;border-radius:0 6px 6px 0">
<span style="color:{c['color']};font-weight:bold">Recommended Action: </span>
<span style="color:#ddd">{c['action']}</span>
</div>
{vlm_block}
</div>"""
def _empty_alert() -> str:
return """
<div style="background:#0a0a0f;border:1px solid #222;border-radius:12px;padding:40px;
text-align:center;color:#555;font-family:'Courier New',monospace">
Select a location and date, then click <b style="color:#888">Load</b> to see the
spectral assessment or <b style="color:#888">Run VLM</b> for the full AI report.
</div>"""
# ── Tab 1: Live Demo ───────────────────────────────────────────────────────────
def _get_dates(location_key: str) -> list[str]:
return [e["date"] for e in TIMESERIES.get(location_key, [])]
def tab1_load(location_key: str, date: str):
"""Load preset — no model, instant."""
entries = TIMESERIES.get(location_key, [])
entry = next((e for e in entries if e["date"] == date), None)
if entry is None:
return None, _empty_alert()
img_path = EXAMPLES_DIR / entry["image"]
pil_img = Image.open(img_path).convert("RGB") if img_path.exists() else None
loc = LOC_DISPLAY.get(location_key, location_key)
alert = _alert_card(entry["severity"], entry["bloom_pct"],
entry["ndci_mean"], entry["ndci_max"], loc, date,
source="Spectral only")
return pil_img, alert
def tab1_run_vlm(location_key: str, date: str):
"""Load preset + run VLM inference."""
entries = TIMESERIES.get(location_key, [])
entry = next((e for e in entries if e["date"] == date), None)
if entry is None:
return None, "<p style='color:#f87171'>No data for this date.</p>"
img_path = EXAMPLES_DIR / entry["image"]
if not img_path.exists():
return None, "<p style='color:#f87171'>Example image not found.</p>"
pil_img = Image.open(img_path).convert("RGB")
loc = LOC_DISPLAY.get(location_key, location_key)
vlm_text = run_vlm(pil_img, loc, date, entry["ndci_mean"], entry["bloom_pct"])
alert = _alert_card(entry["severity"], entry["bloom_pct"],
entry["ndci_mean"], entry["ndci_max"], loc, date,
vlm_text, source="AlgaeGuard VLM")
return pil_img, alert
def tab1_update_dates(location_key: str):
dates = _get_dates(location_key)
return gr.Dropdown(choices=dates, value=dates[-1] if dates else None)
# ── Tab 2: Historical Timeline ─────────────────────────────────────────────────
_SEV_COLORS = {
"CLEAR": "#4ade80", "LOW": "#a3e635", "MEDIUM": "#facc15",
"HIGH": "#f97316", "CRITICAL": "#ef4444",
}
def tab2_build_chart(location_key: str):
entries = TIMESERIES.get(location_key, [])
if not entries:
return go.Figure()
dates = [e["date"] for e in entries]
bloom_pcts = [e["bloom_pct"] for e in entries]
severities = [e["severity"] for e in entries]
ndci_means = [e["ndci_mean"] for e in entries]
fig = go.Figure()
# Background area fill
fig.add_trace(go.Scatter(
x=dates, y=bloom_pcts, fill="tozeroy",
fillcolor="rgba(96,165,250,0.06)", line=dict(color="#60a5fa", width=1.5),
mode="lines", name="Bloom %", showlegend=False,
))
# Per-severity markers
for sev in SEVERITY_ORDER:
idx = [i for i, s in enumerate(severities) if s == sev]
if not idx:
continue
fig.add_trace(go.Scatter(
x=[dates[i] for i in idx],
y=[bloom_pcts[i] for i in idx],
mode="markers", name=sev,
marker=dict(color=_SEV_COLORS[sev], size=9, symbol="circle",
line=dict(color="#000", width=0.5)),
text=[f"<b>{sev}</b><br>{dates[i]}<br>Bloom: {bloom_pcts[i]:.1f}%<br>NDCI: {ndci_means[i]:.3f}"
for i in idx],
hovertemplate="%{text}<extra></extra>",
))
# Severity threshold lines
thresholds = [
(1, "#a3e635", "LOW"),
(8, "#facc15", "MEDIUM"),
(25, "#f97316", "HIGH"),
]
for y, color, label in thresholds:
fig.add_hline(y=y, line=dict(color=color, dash="dot", width=1),
annotation=dict(text=label, font=dict(color=color, size=10),
bgcolor="#0a0a0f", x=1.0))
# Real-world crisis markers
events = [ev for ev in REAL_WORLD_EVENTS if ev["location"] == location_key]
for ev in events:
fig.add_vline(
x=ev["date"], line=dict(color="#ef4444", dash="dash", width=1.5),
annotation=dict(text=f"⚠ {ev['label']}", textangle=-90,
font=dict(color="#ef4444", size=10), bgcolor="#0a0a0f"),
)
loc = LOC_DISPLAY.get(location_key, location_key)
fig.update_layout(
title=dict(text=f"HAB Timeline — {loc}", font=dict(color="#e2e8f0", size=15)),
xaxis=dict(title="Date", gridcolor="#1e1e2e", tickformat="%b %Y",
tickfont=dict(color="#888")),
yaxis=dict(title="Bloom Coverage (%)", gridcolor="#1e1e2e", tickfont=dict(color="#888")),
paper_bgcolor="#0a0a0f", plot_bgcolor="#0d0d1a",
font=dict(color="#ccc", family="Courier New"),
legend=dict(bgcolor="#0d0d1a", bordercolor="#333", x=0, y=1),
hovermode="closest", margin=dict(r=80),
)
return fig
def tab2_events_html(location_key: str) -> str:
events = [ev for ev in REAL_WORLD_EVENTS if ev["location"] == location_key]
if not events:
return "<p style='color:#555'>No documented crises for this location in our dataset.</p>"
rows = ""
for ev in events:
c = SEVERITY_CFG[ev["severity"]]
rows += f"""
<tr>
<td style="color:#888;padding:8px 12px;border-bottom:1px solid #1e1e2e">{ev['date']}</td>
<td style="padding:8px 12px;border-bottom:1px solid #1e1e2e">
<span style="color:{c['color']};font-weight:bold">{ev['label']}</span>
</td>
<td style="color:#aaa;padding:8px 12px;border-bottom:1px solid #1e1e2e;font-size:0.9em">{ev['desc']}</td>
</tr>"""
return f"""
<table style="width:100%;border-collapse:collapse;font-family:'Courier New',monospace;
background:#0d0d1a;border-radius:8px;overflow:hidden">
<thead>
<tr style="background:#151520">
<th style="color:#666;text-align:left;padding:10px 12px;font-size:0.8em;text-transform:uppercase">Date</th>
<th style="color:#666;text-align:left;padding:10px 12px;font-size:0.8em;text-transform:uppercase">Event</th>
<th style="color:#666;text-align:left;padding:10px 12px;font-size:0.8em;text-transform:uppercase">Impact</th>
</tr>
</thead>
<tbody>{rows}</tbody>
</table>"""
def tab2_update(location_key: str):
return tab2_build_chart(location_key), tab2_events_html(location_key)
# ── Tab 3: Custom Inference ────────────────────────────────────────────────────
def _geocode(name: str) -> tuple[Optional[float], Optional[float], str]:
try:
from geopy.geocoders import Nominatim
geo = Nominatim(user_agent="algaeguard-hab")
result = geo.geocode(name, timeout=10)
if result:
return result.latitude, result.longitude, result.address
except Exception:
pass
return None, None, "Could not geocode — try entering coordinates directly"
def _folium_map(lat: float, lon: float, zoom: int = 4) -> str:
import folium
m = folium.Map(location=[lat, lon], zoom_start=zoom, tiles="CartoDB dark_matter",
width="100%", height=300)
folium.Marker(
[lat, lon],
popup=f"<b>Target</b><br>{lat:.4f}°, {lon:.4f}°",
tooltip="Target location",
icon=folium.Icon(color="red", icon="exclamation-sign"),
).add_to(m)
for loc in HAB_LOCATIONS:
folium.CircleMarker(
[loc["lat"], loc["lon"]], radius=6,
color="#60a5fa", fill=True, fill_opacity=0.35,
tooltip=loc["display"],
).add_to(m)
return m._repr_html_()
def tab3_geocode(location_name: str):
if not location_name.strip():
return "", "", "Enter a location name to geocode"
lat, lon, addr = _geocode(location_name.strip())
if lat is None:
return "", "", addr
return str(round(lat, 4)), str(round(lon, 4)), addr
def tab3_infer(image_input, location_name: str, lat_str: str, lon_str: str, date: str):
pil_img = None
ndci_map = None
stats = {}
lat, lon = None, None
# Resolve coordinates
if lat_str and lon_str:
try:
lat, lon = float(lat_str), float(lon_str)
except ValueError:
pass
# Determine location display name
loc_display = location_name.strip() or (f"{lat:.4f}°N, {lon:.4f}°E" if lat else "Unknown")
date_str = date or datetime.now().strftime("%Y-%m-%d")
# Path A: SimSat live fetch (requires SIMSAT_API_URL env var)
simsat_available = bool(os.environ.get("SIMSAT_API_URL"))
source = ""
map_html = ""
if lat and lon and not image_input and simsat_available:
result = _fetch_simsat(lat, lon, date_str)
if result:
ndci_map, stats = result
cmap_bgr = _ndci_to_colormap(ndci_map)
pil_img = Image.fromarray(cv2.cvtColor(cmap_bgr, cv2.COLOR_BGR2RGB))
source = "SimSat · Sentinel-2"
else:
source = "SimSat — no image available for this date/location"
# Path B: uploaded image
if image_input is not None:
if isinstance(image_input, np.ndarray):
pil_img = Image.fromarray(image_input).convert("RGB")
else:
pil_img = image_input.convert("RGB")
source = "Uploaded NDCI colormap"
# Build map
if lat and lon:
try:
map_html = _folium_map(lat, lon)
except Exception:
map_html = ""
if pil_img is None:
msg = (
"<p style='color:#f87171'>No image available.<br>"
+ ("Upload an NDCI colormap image." if not simsat_available
else "Upload an NDCI colormap or provide coordinates + date.")
+ "</p>"
)
return None, map_html, msg
# VLM inference
ndci_mean = stats.get("ndci_mean", 0.0)
bloom_pct = stats.get("bloom_pct", 0.0)
severity = stats.get("severity", "MEDIUM")
ndci_max = stats.get("ndci_max", 0.0)
vlm_text = run_vlm(pil_img, loc_display, date_str, ndci_mean, bloom_pct)
# Re-parse severity from VLM output if we don't have spectral stats
if not stats:
for sev in ["CRITICAL", "HIGH", "MEDIUM", "LOW", "CLEAR"]:
if sev in vlm_text.upper():
severity = sev
break
alert_html = _alert_card(severity, bloom_pct, ndci_mean, ndci_max,
loc_display, date_str, vlm_text, source)
return pil_img, map_html, alert_html
# ── CSS ────────────────────────────────────────────────────────────────────────
CSS = """
body, .gradio-container { background: #080810 !important; }
.tab-nav button { font-family: 'Courier New', monospace !important; font-size: 0.95em !important; }
.tab-nav button.selected { color: #60a5fa !important; border-color: #60a5fa !important; }
#header { text-align: center; padding: 24px 0 8px; }
#header h1 { font-family: 'Courier New', monospace; font-size: 2.2em;
background: linear-gradient(135deg, #60a5fa, #34d399);
-webkit-background-clip: text; -webkit-text-fill-color: transparent; margin: 0; }
#header p { color: #666; font-family: 'Courier New', monospace; font-size: 0.85em; margin: 6px 0 0; }
.gr-button-primary { background: #1d4ed8 !important; border: none !important; }
.gr-button-secondary { background: #1e1e2e !important; border: 1px solid #333 !important; }
"""
# ── Build UI ───────────────────────────────────────────────────────────────────
SIMSAT_LIVE = bool(os.environ.get("SIMSAT_API_URL"))
LOC_CHOICES = [(l["display"], l["name"]) for l in HAB_LOCATIONS]
with gr.Blocks(theme=gr.themes.Base(
primary_hue="blue", neutral_hue="slate",
font=[gr.themes.GoogleFont("Inter"), "monospace"],
), css=CSS, title="AlgaeGuard — HAB Detection from Orbit") as demo:
gr.HTML("""
<div id="header">
<h1>🛰️ AlgaeGuard</h1>
<p>Autonomous Harmful Algal Bloom Detection from Orbit · LFM2.5-VL-450M fine-tuned on Sentinel-2 NDCI imagery</p>
</div>""")
with gr.Tabs():
# ── Tab 1: Live Demo ───────────────────────────────────────────────────
with gr.Tab("🛰️ Live Demo"):
gr.Markdown(
"Select a monitored water body and date. **Load** shows spectral stats instantly. "
"**Run VLM** loads the fine-tuned model and generates the full operator report (~30–45s on CPU, ~4s on GPU)."
)
with gr.Row():
with gr.Column(scale=1):
t1_loc = gr.Dropdown(choices=LOC_CHOICES, value="lake_erie",
label="Water Body", interactive=True)
t1_date = gr.Dropdown(choices=_get_dates("lake_erie"),
value=_get_dates("lake_erie")[-1],
label="Date", interactive=True)
with gr.Row():
t1_load_btn = gr.Button("Load", variant="secondary")
t1_vlm_btn = gr.Button("⚡ Run VLM", variant="primary")
t1_img = gr.Image(label="NDCI Colormap (JET)", height=360)
with gr.Column(scale=2):
t1_alert = gr.HTML(value=_empty_alert())
t1_loc.change(tab1_update_dates, t1_loc, t1_date)
t1_load_btn.click(tab1_load, [t1_loc, t1_date], [t1_img, t1_alert])
t1_vlm_btn.click(tab1_run_vlm, [t1_loc, t1_date], [t1_img, t1_alert])
# Pre-load first example on startup
demo.load(tab1_load,
inputs=[gr.State("lake_erie"), gr.State(_get_dates("lake_erie")[-1])],
outputs=[t1_img, t1_alert])
# ── Tab 2: Historical HAB Timeline ─────────────────────────────────────
with gr.Tab("📈 HAB Timeline"):
gr.Markdown(
"218 real Sentinel-2 observations across 6 water bodies (2022–2024). "
"Red dashed lines mark documented crisis events."
)
t2_loc = gr.Dropdown(choices=LOC_CHOICES, value="lake_erie",
label="Water Body", interactive=True)
t2_chart = gr.Plot(label="Bloom Coverage Over Time")
t2_events = gr.HTML()
t2_loc.change(tab2_update, t2_loc, [t2_chart, t2_events])
demo.load(tab2_update,
inputs=gr.State("lake_erie"),
outputs=[t2_chart, t2_events])
# ── Tab 3: Custom Inference ─────────────────────────────────────────────
with gr.Tab("🔍 Custom Inference"):
gr.Markdown(
"**Path A — Upload** an NDCI colormap PNG and run inference directly.\n\n"
+ ("**Path B — Live satellite fetch:** Enter a location + date. "
"AlgaeGuard will pull Sentinel-2 bands from SimSat, compute NDCI, "
"and run the VLM automatically."
if SIMSAT_LIVE else
"**Path B (SimSat):** Set the `SIMSAT_API_URL` Space secret to enable "
"live satellite fetch for any coordinates on Earth.")
)
with gr.Row():
with gr.Column(scale=1):
t3_img_upload = gr.Image(label="Upload NDCI Colormap (optional)", type="pil",
height=260)
gr.Markdown("**— or enter location —**")
t3_loc_name = gr.Textbox(label="Location name", placeholder="e.g. Lake Balaton, Hungary")
with gr.Row():
t3_lat = gr.Textbox(label="Latitude", placeholder="41.66")
t3_lon = gr.Textbox(label="Longitude", placeholder="-83.55")
t3_geo_btn = gr.Button("Geocode →", variant="secondary", size="sm")
t3_geo_msg = gr.Textbox(label="Resolved address", interactive=False, lines=1)
t3_date = gr.Textbox(label="Date (YYYY-MM-DD)",
value=datetime.now().strftime("%Y-%m-%d"))
t3_run_btn = gr.Button("⚡ Run AlgaeGuard", variant="primary")
with gr.Column(scale=2):
t3_map = gr.HTML(label="Location map")
t3_result_img = gr.Image(label="NDCI Colormap", height=220, visible=True)
t3_alert = gr.HTML()
t3_geo_btn.click(tab3_geocode, [t3_loc_name], [t3_lat, t3_lon, t3_geo_msg])
t3_run_btn.click(tab3_infer,
[t3_img_upload, t3_loc_name, t3_lat, t3_lon, t3_date],
[t3_result_img, t3_map, t3_alert])
# ── Tab 4: About ────────────────────────────────────────────────────────
with gr.Tab("ℹ️ About"):
gr.Markdown(f"""
## AlgaeGuard — Autonomous HAB Detection from Orbit
**AI in Space Hackathon** · Liquid AI Challenge · DPhi Space Track
### The Problem
The 2014 Toledo water crisis left 400,000 people without safe drinking water.
Sentinel-2 NDCI data shows the bloom forming and intensifying on Lake Erie for
**two full weeks before** that crisis. The data existed. The detection didn't happen
in time because every existing pipeline routes raw imagery to the ground, queues it
for analyst review, and produces a report 24–72 hours later.
AlgaeGuard solves this by running inference **on-board**: satellite overpass → NDCI
computation → VLM classification → 200-byte JSON alert downlinked to water utility ops.
One orbit pass, one alert, latency under 90 minutes.
### Architecture
```
Satellite Overpass → Band Extraction → NDCI Colormap → LFM2.5-VL-450M → Alert
SimSat polling B04/B05/B08/B03 JET 512×512 LoRA SFT JSON
(T+0 min) spectral indices (T+10 min) on-board (T+90 min)
```
### Model Performance (v2)
| Metric | v1 | v2 |
|--------|----|----|
| Holdout Accuracy | 66.7% | **76.9%** (20/26) |
| Eval Loss | 0.467 | **0.066** |
| MEDIUM F1 | 0.00 | **0.87** |
| CLEAR↔CRITICAL errors | present | **0** |
All 6 errors are adjacent-class (e.g. HIGH predicted as MEDIUM).
Zero CLEAR↔CRITICAL confusions across the holdout set.
### Published Artifacts
| Artifact | Link |
|----------|------|
| Fine-tuned model | [debrajsingha/algaeguard-lfm2-5-vl-450m](https://huggingface.co/debrajsingha/algaeguard-lfm2-5-vl-450m) · 856MB · CC BY 4.0 |
| Training dataset | [debrajsingha/algaeguard-hab-ndci](https://huggingface.co/datasets/debrajsingha/algaeguard-hab-ndci) · 398 samples |
| Source code | [github.com/debpks/algaeguard-llm](https://github.com/debpks/algaeguard-llm) |
| SimSat | [github.com/debpks/SimSat](https://github.com/debpks/SimSat) |
### Stack
| Component | Technology |
|-----------|-----------|
| Satellite imagery | DPhi Space SimSat (Sentinel-2 simulation) |
| Spectral indices | NumPy — NDCI, FAI, NDWI |
| Base VLM | Liquid AI LFM2.5-VL-450M |
| Fine-tuning | Liquid AI LEAP SDK (LoRA r=16, 15 epochs) |
| Training compute | Modal A10G GPU |
| Monitoring | WandB — `algaeguard_hab_detection` |
""")
demo.launch()
|