Spaces:
Paused
Paused
File size: 10,214 Bytes
4eefabb | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 | """
Step 4 / Model Evaluation
==========================
Produces *publication-quality* figures that can be pasted directly into
the thesis (Chapter 5 β Results / Discussion). Run AFTER 3_train_model.py.
Inputs
------
models/rf_model.pkl
models/feature_columns.json
data/processed.csv
Outputs
-------
figures/01_roc_curve.png ROC + AUC
figures/02_pr_curve.png Precision-Recall + AP
figures/03_calibration_curve.png Reliability diagram + Brier score
figures/04_threshold_sweep.png F1 / F2 / Precision / Recall vs threshold
figures/05_feature_importance.png Top-20 features (horizontal bar)
figures/06_confusion_matrix.png Confusion matrix at optimal F2 threshold
figures/threshold_sweep.csv Same data as 04 in machine-readable form
figures/evaluation_summary.json One-shot metrics blob for the thesis
Run: python scripts/4_evaluate_model.py
"""
from __future__ import annotations
import json
from datetime import datetime, timezone
from pathlib import Path
import joblib
import matplotlib
import numpy as np
import pandas as pd
matplotlib.use("Agg")
import matplotlib.pyplot as plt
from sklearn.calibration import calibration_curve
from sklearn.metrics import (
auc,
average_precision_score,
brier_score_loss,
confusion_matrix,
f1_score,
fbeta_score,
precision_recall_curve,
precision_score,
recall_score,
roc_curve,
)
ROOT = Path(__file__).resolve().parent.parent
MODEL_DIR = ROOT / "models"
DATA_DIR = ROOT / "data"
FIG_DIR = ROOT / "figures"
FIG_DIR.mkdir(exist_ok=True)
# ββ Matplotlib defaults β keep figures consistent across panels ββββββββββ
plt.rcParams.update({
"figure.figsize": (7.0, 4.5),
"figure.dpi": 120,
"savefig.dpi": 200,
"savefig.bbox": "tight",
"font.size": 11,
"axes.titlesize": 13,
"axes.labelsize": 11,
"legend.fontsize": 10,
"axes.spines.top": False,
"axes.spines.right": False,
"grid.alpha": 0.25,
"axes.axisbelow": True,
})
# ββ Load artefacts βββββββββββββββββββββββββββββββββββββββββββββββββββββββ
def _load() -> tuple:
model_path = MODEL_DIR / "rf_model.pkl"
feats_path = MODEL_DIR / "feature_columns.json"
data_path = DATA_DIR / "processed.csv"
for p in (model_path, feats_path, data_path):
if not p.exists():
raise FileNotFoundError(
f"Missing artefact: {p}. Run scripts/3_train_model.py first."
)
model = joblib.load(model_path)
feat_cols = json.loads(feats_path.read_text())
df = pd.read_csv(data_path)
df["time"] = pd.to_datetime(df["time"])
df = df.sort_values("time").reset_index(drop=True)
# Use the last 20% as test (same split as training).
cut = int(len(df) * 0.80)
test = df.iloc[cut:].reset_index(drop=True)
X = test[feat_cols].values
y = test["is_rain_event"].astype(int).values
proba = model.predict_proba(X)[:, 1]
return model, feat_cols, X, y, proba, test
# ββ Figure builders ββββββββββββββββββββββββββββββββββββββββββββββββββββββ
def plot_roc(y, proba) -> dict:
fpr, tpr, _ = roc_curve(y, proba)
auc_v = auc(fpr, tpr)
fig, ax = plt.subplots()
ax.plot(fpr, tpr, color="#0ea5e9", linewidth=2.0, label=f"RF (AUC = {auc_v:.3f})")
ax.plot([0, 1], [0, 1], "--", color="#9ca3af", linewidth=1.0, label="Random baseline")
ax.set_xlabel("False Positive Rate")
ax.set_ylabel("True Positive Rate")
ax.set_title("ROC Curve β rain-event classifier")
ax.legend(loc="lower right")
ax.grid(True)
fig.savefig(FIG_DIR / "01_roc_curve.png")
plt.close(fig)
return {"auc": float(auc_v)}
def plot_pr(y, proba) -> dict:
pr, rc, _ = precision_recall_curve(y, proba)
ap = average_precision_score(y, proba)
base_rate = float(y.mean())
fig, ax = plt.subplots()
ax.plot(rc, pr, color="#10b981", linewidth=2.0, label=f"RF (AP = {ap:.3f})")
ax.hlines(base_rate, 0, 1, colors="#9ca3af", linestyles="--",
label=f"Base rate = {base_rate:.3f}")
ax.set_xlabel("Recall")
ax.set_ylabel("Precision")
ax.set_title("PrecisionβRecall Curve")
ax.legend(loc="lower left")
ax.grid(True)
fig.savefig(FIG_DIR / "02_pr_curve.png")
plt.close(fig)
return {"average_precision": float(ap), "base_rate": base_rate}
def plot_calibration(y, proba) -> dict:
frac_pos, mean_pred = calibration_curve(y, proba, n_bins=10, strategy="quantile")
brier = brier_score_loss(y, proba)
fig, ax = plt.subplots()
ax.plot([0, 1], [0, 1], "--", color="#9ca3af", linewidth=1.0,
label="Perfectly calibrated")
ax.plot(mean_pred, frac_pos, marker="o", color="#f59e0b", linewidth=2.0,
label=f"RF (Brier = {brier:.3f})")
ax.set_xlabel("Mean predicted probability")
ax.set_ylabel("Fraction of positives (observed)")
ax.set_title("Reliability Diagram β model calibration")
ax.legend(loc="upper left")
ax.grid(True)
fig.savefig(FIG_DIR / "03_calibration_curve.png")
plt.close(fig)
return {"brier_score": float(brier)}
def plot_threshold_sweep(y, proba) -> dict:
thresholds = np.linspace(0.05, 0.95, 19)
rows = []
best_f2 = (-1.0, 0.5)
for thr in thresholds:
yp = (proba >= thr).astype(int)
f1 = f1_score(y, yp, zero_division=0)
f2 = fbeta_score(y, yp, beta=2.0, zero_division=0)
prec = precision_score(y, yp, zero_division=0)
rec = recall_score(y, yp, zero_division=0)
rows.append({
"threshold": thr, "f1": f1, "f2": f2,
"precision": prec, "recall": rec,
})
if f2 > best_f2[0]:
best_f2 = (f2, thr)
sweep = pd.DataFrame(rows)
sweep.to_csv(FIG_DIR / "threshold_sweep.csv", index=False)
fig, ax = plt.subplots()
ax.plot(sweep.threshold, sweep.precision, label="Precision", color="#0ea5e9", linewidth=2.0)
ax.plot(sweep.threshold, sweep.recall, label="Recall", color="#10b981", linewidth=2.0)
ax.plot(sweep.threshold, sweep.f1, label="F1", color="#f59e0b", linewidth=1.4, linestyle="--")
ax.plot(sweep.threshold, sweep.f2, label="F2", color="#ef4444", linewidth=2.0)
ax.axvline(best_f2[1], color="#ef4444", alpha=0.25, linestyle=":")
ax.set_xlabel("Decision threshold")
ax.set_ylabel("Score")
ax.set_title(f"Threshold sweep β best F2 = {best_f2[0]:.3f} @ Ο = {best_f2[1]:.2f}")
ax.legend(loc="lower left", ncols=4)
ax.grid(True)
fig.savefig(FIG_DIR / "04_threshold_sweep.png")
plt.close(fig)
return {"best_f2": float(best_f2[0]), "best_f2_threshold": float(best_f2[1])}
def plot_feature_importance(model, feat_cols, top_n: int = 20) -> dict:
imp = pd.Series(model.feature_importances_, index=feat_cols)
imp = imp.sort_values(ascending=True).tail(top_n)
fig, ax = plt.subplots(figsize=(7.0, 0.32 * len(imp) + 1.2))
ax.barh(imp.index, imp.values, color="#6366f1")
ax.set_xlabel("Importance (mean decrease in impurity)")
ax.set_title(f"Top {len(imp)} feature importances")
ax.grid(True, axis="x")
fig.savefig(FIG_DIR / "05_feature_importance.png")
plt.close(fig)
return {"feature_importance": imp.sort_values(ascending=False).to_dict()}
def plot_confusion(y, proba, threshold: float) -> dict:
yp = (proba >= threshold).astype(int)
cm = confusion_matrix(y, yp)
tn, fp, fn, tp = cm.ravel()
fig, ax = plt.subplots(figsize=(4.5, 4.0))
im = ax.imshow(cm, cmap="Blues")
for i in range(2):
for j in range(2):
ax.text(j, i, str(cm[i, j]), ha="center", va="center",
color="black" if cm[i, j] < cm.max() / 2 else "white",
fontsize=13, fontweight="bold")
ax.set_xticks([0, 1], ["No rain", "Rain"])
ax.set_yticks([0, 1], ["No rain", "Rain"])
ax.set_xlabel("Predicted label")
ax.set_ylabel("True label")
ax.set_title(f"Confusion matrix @ Ο = {threshold:.2f}")
fig.colorbar(im, ax=ax, fraction=0.046, pad=0.04)
fig.savefig(FIG_DIR / "06_confusion_matrix.png")
plt.close(fig)
return {"tn": int(tn), "fp": int(fp), "fn": int(fn), "tp": int(tp)}
# ββ Main βββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββββ
def main() -> None:
print(f"[eval] loading artefacts from {MODEL_DIR}")
model, feat_cols, _, y, proba, _test = _load()
print(f"[eval] test set: {len(y)} samples ({int(y.sum())} positives, "
f"{(y.mean() * 100):.1f}% rain-event rate)")
summary = {
"generated_at": datetime.now(timezone.utc).isoformat(),
"n_test": len(y),
"n_positives": int(y.sum()),
"positive_rate": float(y.mean()),
"n_features": len(feat_cols),
}
summary["roc"] = plot_roc(y, proba)
summary["pr"] = plot_pr(y, proba)
summary["calibration"] = plot_calibration(y, proba)
sweep = plot_threshold_sweep(y, proba)
summary["threshold_sweep"] = sweep
summary["confusion"] = plot_confusion(y, proba, sweep["best_f2_threshold"])
top_importances = plot_feature_importance(model, feat_cols)
summary["top_features"] = list(top_importances["feature_importance"].keys())[:10]
out = FIG_DIR / "evaluation_summary.json"
out.write_text(json.dumps(summary, indent=2))
print(f"[eval] all figures written to {FIG_DIR}")
print(f"[eval] summary JSON: {out}")
print(f"[eval] best F2 = {sweep['best_f2']:.3f} at Ο = {sweep['best_f2_threshold']:.2f}")
print(f"[eval] ROC AUC = {summary['roc']['auc']:.3f}, "
f"PR AP = {summary['pr']['average_precision']:.3f}, "
f"Brier = {summary['calibration']['brier_score']:.3f}")
if __name__ == "__main__":
main()
|