Spaces:
Sleeping
Sleeping
File size: 24,506 Bytes
745f62a | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 | """
Hackathon-grade quality test: 15 diverse Hindi medical transcripts.
Tests form extraction + danger sign detection across all 4 visit types.
Checks: value accuracy, hallucination, false positives, false negatives,
code-switching, unlabeled audio, edge cases.
Each test uses the correct schema for its visit type.
"""
import json
import os
import re
import sys
import time
os.environ["PYTHONIOENCODING"] = "utf-8"
sys.stdout.reconfigure(encoding="utf-8")
import ollama
FORM_SYSTEM_PROMPT = (
"You are a clinical data extraction system for India's ASHA health worker program. "
"Extract structured data from the Hindi/Hinglish home visit conversation into the requested JSON schema. "
"ONLY extract information explicitly stated in the conversation. Use null for any field not mentioned.\n\n"
"STRICT RULES:\n"
"1. Do NOT invent names, dates, phone numbers, or addresses. If the patient is only called 'दीदी' or 'बहन', set name to null.\n"
"2. If age is not explicitly stated as a number, set age to null. Do NOT guess from context.\n"
"3. If blood group, HIV status, or other lab tests are not discussed, they MUST be null — never assume 'negative' or a default group.\n"
"4. If the conversation has no speaker labels (ASHA/Patient), still extract data but be extra strict about nulls.\n"
"5. Numbers may appear as Hindi words (e.g., 'एक सो दस बटा सत्तर' = 110/70). Convert them to digits.\n"
"Return valid JSON only."
)
DANGER_SYSTEM_PROMPT = (
"You are a clinical danger sign detection system for India's ASHA health worker program. "
"Analyze the Hindi/Hinglish home visit conversation for NHM-defined danger signs.\n\n"
"STRICT RULES:\n"
"1. ONLY flag a danger sign if the EXACT words proving it appear in the conversation.\n"
"2. utterance_evidence MUST be a verbatim copy-paste from the conversation — do NOT paraphrase or fabricate.\n"
"3. If a vital sign is NORMAL (e.g., BP 110/70, temperature 37°C), that is NOT a danger sign.\n"
"4. Most routine visits have ZERO danger signs. Return an empty danger_signs array when none exist.\n"
"5. When in doubt, do NOT flag — a missed flag is better than a false alarm.\n"
"Return valid JSON only."
)
# ============================================================
# 15 TEST CASES
# ============================================================
# Each: (name, visit_type, schema_name, transcript,
# expected_form_checks, expected_danger_min, expected_danger_max,
# expected_referral, hallucination_traps)
#
# expected_form_checks: dict of {json_path: expected_value}
# use dotted paths like "vitals.bp_systolic"
# hallucination_traps: list of field paths that MUST be null
TESTS = [
# ── ANC CASES ──
# 1. ANC Normal — all vitals mentioned, labeled speakers
(
"ANC Normal — full vitals",
"anc_visit", "anc_visit",
(
"ASHA: नमस्ते, कैसे हैं आप?\n"
"Patient: नमस्ते दीदी, मैं ठीक हूँ।\n"
"ASHA: आपका BP 110/70 है, बिल्कुल ठीक है। वजन 58 kg है। Hb 11.5 आया था।\n"
"ASHA: आप 24 हफ्ते की हैं। IFA रोज़ ले रही हैं? TT पहला लग गया।\n"
"Patient: हाँ दीदी। डिलीवरी PHC में करवाएँगे।"
),
{
"vitals.bp_systolic": 110, "vitals.bp_diastolic": 70,
"vitals.weight_kg": 58, "vitals.hemoglobin_gm_percent": 11.5,
"pregnancy.gestational_weeks": 24,
"pregnancy.expected_delivery_place": "PHC",
},
0, 0, "routine_followup",
["patient.name", "patient.age", "lab_results.blood_group", "lab_results.hiv_status"],
),
# 2. ANC Preeclampsia — multiple danger signs
(
"ANC Preeclampsia — multi-danger",
"anc_visit", "anc_visit",
(
"ASHA: नमस्ते दीदी, कैसे हैं?\n"
"Patient: दीदी, बहुत सिरदर्द हो रहा है। आँखों के सामने धुंधला दिखता है।\n"
"Patient: चेहरे पर सूजन आ गई है।\n"
"ASHA: BP चेक करती हूँ... 155/100 आ रहा है। बहुत ज़्यादा है।\n"
"Patient: पैरों में भी काफी सूजन है।\n"
"ASHA: आपको तुरंत PHC जाना होगा। आप 8 महीने की हैं।"
),
{"vitals.bp_systolic": 155, "vitals.bp_diastolic": 100},
2, 5, "refer_immediately",
["patient.name", "lab_results.blood_group"],
),
# 3. ANC Severe anemia — low Hb
(
"ANC Severe Anemia",
"anc_visit", "anc_visit",
(
"ASHA: Hb report आया?\n"
"Patient: हाँ, 6.5 आया है। बहुत कम है। चक्कर आते हैं। साँस लेने में तकलीफ़ होती है।\n"
"ASHA: BP 100/60 है। वजन 45 kg। आप 20 हफ्ते की हैं।\n"
"ASHA: आपको PHC में आयरन injection लेना होगा।"
),
{
"vitals.bp_systolic": 100, "vitals.bp_diastolic": 60,
"vitals.weight_kg": 45, "vitals.hemoglobin_gm_percent": 6.5,
"pregnancy.gestational_weeks": 20,
},
1, 3, "refer_immediately",
["patient.name", "lab_results.blood_group"],
),
# 4. ANC — only partial info mentioned
(
"ANC Partial Info — sparse transcript",
"anc_visit", "anc_visit",
(
"ASHA: BP ठीक है, 118/76 है।\n"
"Patient: ठीक है दीदी।"
),
{"vitals.bp_systolic": 118, "vitals.bp_diastolic": 76},
0, 0, "routine_followup",
["patient.name", "patient.age", "vitals.weight_kg", "vitals.hemoglobin_gm_percent",
"pregnancy.gestational_weeks", "lab_results.blood_group", "lab_results.hiv_status"],
),
# 5. ANC Unlabeled — no speaker labels (realistic ASR output)
(
"ANC Unlabeled ASR output",
"anc_visit", "anc_visit",
(
"नमस्ते कैसे हैं BP check करती हूँ BP 120/80 है normal है "
"weight 55 kg है Hb test करवाया था 10.2 आया था थोड़ा low है "
"IFA रोज़ लेना गर्भ 28 weeks का है delivery के लिए district hospital जाएँगे"
),
{
"vitals.bp_systolic": 120, "vitals.bp_diastolic": 80,
"vitals.weight_kg": 55, "vitals.hemoglobin_gm_percent": 10.2,
"pregnancy.gestational_weeks": 28,
},
0, 0, "routine_followup",
["patient.name", "lab_results.blood_group"],
),
# 6. ANC Hinglish heavy — code-switching
(
"ANC Hinglish heavy code-switch",
"anc_visit", "anc_visit",
(
"ASHA: Hello didi, aaj check-up hai. BP check karti hoon. 130/85 hai, thoda high.\n"
"Patient: Koi problem hai kya?\n"
"ASHA: Abhi nahi, but monitor karna hoga. Weight 62 kg. Hb report mein 9.8 aaya.\n"
"ASHA: Aap 32 weeks ki hain. Baby ki movement kaisi hai?\n"
"Patient: Bahut move karta hai.\n"
"ASHA: Good. Delivery ke liye district hospital ready hai?"
),
{
"vitals.bp_systolic": 130, "vitals.bp_diastolic": 85,
"vitals.weight_kg": 62, "vitals.hemoglobin_gm_percent": 9.8,
"pregnancy.gestational_weeks": 32,
},
0, 1, "routine_followup", # BP 130/85 is borderline, 0-1 flags acceptable
["patient.name", "lab_results.blood_group"],
),
# 7. ANC with named patient — name should be extracted
(
"ANC with patient name Sunita",
"anc_visit", "anc_visit",
(
"ASHA: नमस्ते सुनीता जी, आज का चेकअप करते हैं।\n"
"सुनीता: नमस्ते दीदी। मेरी उम्र 25 साल है।\n"
"ASHA: BP 116/74 है। वजन 54 kg। Hb 12.0 है। बहुत अच्छा।\n"
"ASHA: 30 हफ्ते की हैं। सब ठीक चल रहा है।"
),
{
"patient.name": "सुनीता",
"patient.age": 25,
"vitals.bp_systolic": 116, "vitals.bp_diastolic": 74,
"vitals.weight_kg": 54, "vitals.hemoglobin_gm_percent": 12.0,
"pregnancy.gestational_weeks": 30,
},
0, 0, "routine_followup",
["lab_results.blood_group", "lab_results.hiv_status"],
),
# ── PNC CASES ──
# 8. PNC Normal — mother and baby fine
(
"PNC Normal — day 7",
"pnc_visit", "pnc_visit",
(
"ASHA: नमस्ते दीदी। डिलीवरी को 7 दिन हो गए। आप कैसे हैं?\n"
"Mother: मैं ठीक हूँ। बच्चा अच्छे से दूध पी रहा है।\n"
"ASHA: बच्चे का वजन 3.1 kg है। नाभि सूखी है। तापमान सामान्य है।\n"
"ASHA: आपका BP 118/76 है। खून बहना बंद हो गया?\n"
"Mother: हाँ, अब बहुत कम है।"
),
{
"visit_info.visit_day": 7,
"infant_assessment.weight_kg": 3.1,
},
0, 0, "routine_followup",
[],
),
# 9. PNC Danger — newborn not feeding + fever
(
"PNC Danger — newborn not feeding",
"pnc_visit", "pnc_visit",
(
"ASHA: बच्चा कैसा है?\n"
"Mother: दीदी, बच्चा बहुत सोता रहता है। दूध ठीक से नहीं पीता। 12 घंटे से दूध नहीं पिया।\n"
"ASHA: बच्चे का रोना कैसा है?\n"
"Mother: बहुत कमज़ोर आवाज़ में रोता है।\n"
"ASHA: तापमान 100.5 डिग्री है। बुखार है। बच्चा सुस्त लग रहा है।\n"
"ASHA: ये danger signs हैं। तुरंत PHC ले जाना होगा।"
),
{"infant_assessment.temperature": 100.5},
1, 4, "refer_immediately",
[],
),
# 10. PNC — heavy postpartum bleeding (maternal danger)
(
"PNC Danger — postpartum bleeding",
"pnc_visit", "pnc_visit",
(
"ASHA: डिलीवरी को 3 दिन हुए। कैसे हैं?\n"
"Mother: दीदी, बहुत ज़्यादा खून आ रहा है। pad 1 घंटे में भीग जाता है।\n"
"Mother: चक्कर भी आ रहे हैं। बहुत कमज़ोरी है।\n"
"ASHA: ये बहुत गंभीर है। तुरंत hospital जाना होगा।"
),
{"visit_info.days_since_delivery": 3},
1, 3, "refer_immediately",
[],
),
# ── DELIVERY CASES ──
# 11. Delivery — normal institutional
(
"Delivery Normal — institutional",
"delivery", "delivery",
(
"ASHA: डिलीवरी कब हुई?\n"
"Mother: कल रात 3 बजे। लड़का हुआ है।\n"
"ASHA: कहाँ हुई डिलीवरी?\n"
"Mother: PHC में। normal delivery थी।\n"
"ASHA: बच्चे का वजन?\n"
"Mother: 2.8 kg है।\n"
"ASHA: स्तनपान शुरू किया?\n"
"Mother: हाँ, तुरंत शुरू किया। एक घंटे के अंदर।"
),
{
"delivery.place": "PHC",
"delivery.type": "normal",
"infant.sex": "male",
"infant.birth_weight_kg": 2.8,
"infant.breastfed_within_1hr": True,
},
0, 0, "routine_followup",
[],
),
# 12. Delivery — home delivery, low birth weight
(
"Delivery — home, LBW baby",
"delivery", "delivery",
(
"ASHA: बच्चा कहाँ हुआ?\n"
"Mother: घर पर ही हो गया। दाई ने करवाया। लड़की हुई है।\n"
"ASHA: बच्ची का वजन बहुत कम है, 1.8 kg। ये low birth weight है।\n"
"Mother: हाँ, बच्ची बहुत छोटी है।\n"
"ASHA: बच्ची ने जन्म के समय रोया?\n"
"Mother: हाँ, रोई थी।\n"
"ASHA: बच्ची को गर्म रखना ज़रूरी है। PHC में चेकअप करवाना होगा।"
),
{
"delivery.place": "home",
"infant.sex": "female",
"infant.birth_weight_kg": 1.8,
"infant.cried_at_birth": True,
},
1, 2, "refer_immediately",
[],
),
# ── CHILD HEALTH CASES ──
# 13. Child health — routine, healthy
(
"Child Health — routine 9 months",
"child_health", "child_health",
(
"ASHA: बच्चा कैसा है?\n"
"Mother: बिल्कुल ठीक है दीदी। खूब खाता है, खेलता है।\n"
"ASHA: वजन 8.5 kg है। 9 महीने के लिए अच्छा है।\n"
"ASHA: Vitamin A दी थी? हाँ, 6 महीने में पहली dose दी थी।\n"
"ASHA: टीके सब लगे हैं। बच्चा बैठता है, घुटनों पर चलता है। बढ़िया।"
),
{
"child.age_months": 9,
"growth_assessment.weight_kg": 8.5,
"immunization.up_to_date": True,
},
0, 0, "routine_followup",
[],
),
# 14. Child health — sick child, diarrhea + dehydration
(
"Child Health — diarrhea danger",
"child_health", "child_health",
(
"ASHA: बच्चे को क्या हुआ?\n"
"Mother: 3 दिन से दस्त लग रहे हैं। बहुत पतले पानी जैसे।\n"
"Mother: खाना-पीना बंद कर दिया है। बहुत सुस्त हो गया है।\n"
"ASHA: बच्चे का वजन 6.2 kg है। 12 महीने का है।\n"
"ASHA: आँखें धँसी हुई हैं। ये dehydration के signs हैं। तुरंत PHC जाना होगा।"
),
{
"child.age_months": 12,
"growth_assessment.weight_kg": 6.2,
"illness_assessment.diarrhea": True,
"illness_assessment.diarrhea_duration_days": 3,
},
1, 3, "refer_immediately",
[],
),
# ── EDGE CASES ──
# 15. ANC — normal visit with ZERO concerning findings (false positive trap)
(
"ANC Zero Findings — false positive trap",
"anc_visit", "anc_visit",
(
"ASHA: सब ठीक है दीदी?\n"
"Patient: हाँ दीदी, बिल्कुल ठीक हूँ। कोई तकलीफ़ नहीं।\n"
"ASHA: बहुत अच्छा। अगली बार आऊँगी। कोई तकलीफ़ हो तो फ़ोन कर दीजिए।\n"
"Patient: ठीक है दीदी, धन्यवाद।"
),
{}, # No vitals to check — nothing was measured
0, 0, "routine_followup",
["patient.name", "patient.age", "vitals.bp_systolic", "vitals.weight_kg",
"vitals.hemoglobin_gm_percent", "pregnancy.gestational_weeks",
"lab_results.blood_group", "lab_results.hiv_status"],
),
]
def load_schemas():
schemas = {}
for name in ["anc_visit", "pnc_visit", "delivery", "child_health", "danger_signs"]:
with open(f"configs/schemas/{name}.json", encoding="utf-8") as f:
schemas[name] = json.load(f)
return schemas
def get_nested(d, path):
"""Get value from dict using dotted path like 'vitals.bp_systolic'."""
parts = path.split(".")
for p in parts:
if not isinstance(d, dict):
return None
d = d.get(p)
return d
def parse_json_response(raw):
clean = raw.strip().lstrip('\ufeff')
clean = re.sub(r'^`{3,}\s*(?:json)?\s*[\r\n]*', '', clean, flags=re.IGNORECASE)
clean = re.sub(r'[\r\n]*`{3,}\s*$', '', clean).strip()
clean = re.sub(r',\s*([}\]])', r'\1', clean)
if clean and clean[0] not in ('{', '['):
idx = min(
(clean.find("{") if clean.find("{") >= 0 else len(clean)),
(clean.find("[") if clean.find("[") >= 0 else len(clean)),
)
if idx < len(clean):
clean = clean[idx:]
try:
return json.loads(clean)
except json.JSONDecodeError:
for end in range(len(clean), max(0, len(clean) - 200), -1):
if clean[end - 1] in ('}', ']'):
try:
return json.loads(clean[:end])
except json.JSONDecodeError:
continue
return None
def run_all_tests(model):
schemas = load_schemas()
total_pass = 0
total_fail = 0
total_time = 0
issues = []
for (name, visit_type, schema_name, transcript,
expected_form, danger_min, danger_max, expected_referral,
must_be_null) in TESTS:
schema = schemas[schema_name]
danger_schema = schemas["danger_signs"]
# ── Form extraction ──
form_user = (
f"Extract structured data from this ASHA home visit conversation:\n\n"
f"{transcript}\n\n"
f"Output JSON schema:\n{json.dumps(schema, ensure_ascii=False)}"
)
t0 = time.time()
resp = ollama.chat(
model=model,
messages=[
{"role": "system", "content": FORM_SYSTEM_PROMPT},
{"role": "user", "content": form_user},
],
options={"temperature": 0.0, "num_ctx": 4096},
)
form_time = time.time() - t0
form_parsed = parse_json_response(resp.message.content)
# ── Danger sign detection ──
danger_user = (
f"Analyze this ASHA home visit conversation for danger signs.\n\n"
f"Visit type: {visit_type}\n\n"
f"{transcript}\n\n"
f"Output JSON schema:\n{json.dumps(danger_schema, ensure_ascii=False)}"
)
t0 = time.time()
resp2 = ollama.chat(
model=model,
messages=[
{"role": "system", "content": DANGER_SYSTEM_PROMPT},
{"role": "user", "content": danger_user},
],
options={"temperature": 0.0, "num_ctx": 4096},
)
danger_time = time.time() - t0
danger_parsed = parse_json_response(resp2.message.content)
elapsed = form_time + danger_time
total_time += elapsed
test_issues = []
# ── Check form values ──
if form_parsed is None:
test_issues.append("FORM_PARSE_FAIL")
else:
for path, expected_val in expected_form.items():
got = get_nested(form_parsed, path)
if got is None:
test_issues.append(f"MISSING {path} (expected {expected_val})")
else:
try:
if isinstance(expected_val, bool):
if got != expected_val:
test_issues.append(f"WRONG {path}: {got} != {expected_val}")
elif isinstance(expected_val, (int, float)):
if abs(float(got) - float(expected_val)) > 0.5:
test_issues.append(f"WRONG {path}: {got} != {expected_val}")
elif isinstance(expected_val, str):
got_lower = str(got).lower().strip()
exp_lower = expected_val.lower().strip()
# Allow partial match for names and places
if exp_lower not in got_lower and got_lower not in exp_lower:
test_issues.append(f"WRONG {path}: {got} != {expected_val}")
except (ValueError, TypeError):
if str(got) != str(expected_val):
test_issues.append(f"WRONG {path}: {got} != {expected_val}")
# ── Check hallucination traps ──
for path in must_be_null:
val = get_nested(form_parsed, path)
if val is not None and str(val).lower() not in ("null", "none", ""):
test_issues.append(f"HALLUC {path}={val}")
# ── Check danger signs ──
if danger_parsed is None:
test_issues.append("DANGER_PARSE_FAIL")
else:
signs = danger_parsed.get("danger_signs", [])
n_signs = len(signs) if isinstance(signs, list) else 0
if n_signs < danger_min:
test_issues.append(f"FALSE_NEG: {n_signs} signs < {danger_min} expected")
if n_signs > danger_max:
test_issues.append(f"FALSE_POS: {n_signs} signs > {danger_max} expected")
# Check referral
ref = danger_parsed.get("referral_decision", {})
ref_decision = ref.get("decision", "")
# Group equivalent referral decisions
SAFE_REFERRALS = {"routine_followup", "continue_monitoring"}
URGENT_REFERRALS = {"refer_immediately", "refer_within_24h"}
if expected_referral:
exp_group = "safe" if expected_referral in SAFE_REFERRALS else "urgent"
got_group = "safe" if ref_decision in SAFE_REFERRALS else "urgent"
if exp_group != got_group:
test_issues.append(f"REFERRAL: {ref_decision} != {expected_referral}")
# ── Verdict ──
if test_issues:
status = "FAIL"
total_fail += 1
else:
status = "PASS"
total_pass += 1
issues_str = "; ".join(test_issues) if test_issues else "all checks OK"
print(f" {status} [{name}] ({elapsed:.1f}s) {issues_str}")
print(f"\n Score: {total_pass}/{total_pass + total_fail}, avg {total_time / (total_pass + total_fail):.1f}s/test")
return total_pass, total_fail
def main():
models = [
"gemma4:e4b-it-q4_K_M",
"sakhi:latest", # fine-tuned LoRA — 9/15 vs base 15/15, base wins
]
results = {}
for model in models:
print(f"\n{'=' * 70}")
print(f" {model}")
print(f"{'=' * 70}")
p, f = run_all_tests(model)
results[model] = (p, f)
print(f"\n{'=' * 70}")
print("FINAL SCORES")
print(f"{'=' * 70}")
for model, (p, f) in results.items():
pct = p / (p + f) * 100
print(f" {p}/{p+f} ({pct:.0f}%) {model}")
if __name__ == "__main__":
main()
|