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Update start_mcp.py
Browse files- start_mcp.py +109 -297
start_mcp.py
CHANGED
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#!/usr/bin/env python3
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"""
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MaTableGPT MCP Server Launcher
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==============================
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table data from materials science literature.
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Usage:
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python start_mcp.py [--host HOST] [--port PORT] [--mode MODE]
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Arguments:
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--host Host address (default: 0.0.0.0)
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--port Port number (default: 7860)
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--mode Run mode: 'stdio' or 'sse' (default: sse for HuggingFace Space)
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Environment Variables:
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LLM_API_KEY / OPENAI_API_KEY - API key for LLM service
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LLM_API_BASE / OPENAI_API_BASE - Custom API base URL (for third-party services)
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LLM_MODEL / OPENAI_MODEL - Model name (default: gpt-4-turbo-preview)
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MCP_HOST - Server host (default: 0.0.0.0)
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MCP_PORT - Server port (default: 7860)
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"""
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import os
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import sys
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import argparse
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import logging
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# Add current directory to path for imports
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sys.path.insert(0, os.path.dirname(os.path.abspath(__file__)))
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@@ -35,345 +25,167 @@ logging.basicConfig(
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level=logging.INFO,
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format='%(asctime)s - %(name)s - %(levelname)s - %(message)s'
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)
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logger = logging.getLogger("matablgpt-mcp
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def check_environment():
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"""Check if required environment variables are set."""
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warnings = []
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# Check for API key (support both naming conventions)
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api_key = os.environ.get('LLM_API_KEY') or os.environ.get('OPENAI_API_KEY')
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if not api_key:
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warnings.append(
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"LLM_API_KEY/OPENAI_API_KEY not set. GPT extraction features will not work. "
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"Set it in HuggingFace Space secrets or environment variables."
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)
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# Check for API base (for third-party services)
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api_base = os.environ.get('LLM_API_BASE') or os.environ.get('OPENAI_API_BASE')
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if api_base:
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logger.info(f"Using custom API base: {api_base}")
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return warnings
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def check_dependencies():
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"""Check if required packages are installed."""
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missing = []
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required = [
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('mcp', 'mcp[cli]'),
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('openai', 'openai'),
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('bs4', 'beautifulsoup4'),
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('pandas', 'pandas'),
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('lxml', 'lxml')
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]
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for module, package in required:
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try:
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__import__(module)
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except ImportError:
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missing.append(package)
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return missing
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def run_sse_server(host: str, port: int):
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"""Run MCP server in SSE mode
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import uvicorn
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from starlette.applications import Starlette
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from starlette.routing import Route
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from starlette.responses import JSONResponse, HTMLResponse,
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from starlette.requests import Request
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import asyncio
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import json
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# Import MCP
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from mcp_service import mcp
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# Store
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async def
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"""
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message_queue = asyncio.Queue()
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sse_connections[connection_id] = message_queue
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yield f": ping\n\n"
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except asyncio.CancelledError:
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logger.info(f"SSE connection closed: {connection_id}")
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break
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except Exception as e:
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logger.error(f"Error in SSE generator: {e}")
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break
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# Cleanup
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sse_connections.pop(connection_id, None)
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from starlette.responses import StreamingResponse
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return StreamingResponse(
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media_type="text/event-stream",
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headers={
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"Cache-Control": "no-cache",
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"Connection": "keep-alive",
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"X-Accel-Buffering": "no",
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}
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)
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async def
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"""
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try:
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session_id = request.query_params.get("session_id")
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if not session_id or session_id not in sse_connections:
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return JSONResponse(
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{"error": "Invalid or missing session_id"},
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status_code=400
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)
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body = await request.json()
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logger.
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# Process the MCP request
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# Get the method and params
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method = body.get("method", "")
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params = body.get("params", {})
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msg_id = body.get("id")
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#
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if method == "initialize":
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"
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"
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"
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"protocolVersion": "2024-11-05",
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"serverInfo": {
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"name": "MaTableGPT-MCP",
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"version": "1.0.0"
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},
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"capabilities": {
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"tools": {"listChanged": True}
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}
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}
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}
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elif method == "tools/list":
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# Get tools from MCP server
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tools = []
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for
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"name":
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"description":
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"inputSchema": {"type": "object", "properties": {}}
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}
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response = {
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"jsonrpc": "2.0",
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"id": msg_id,
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"result": {"tools": tools}
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}
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elif method == "tools/call":
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tool_name = params.get("name")
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tool_args = params.get("arguments", {})
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"jsonrpc": "2.0",
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"id": msg_id,
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"result": {
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"content": [{"type": "text", "text": json.dumps(result)}]
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}
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}
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else:
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response = {
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"jsonrpc": "2.0",
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"id": msg_id,
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"error": {"code": -32601, "message": f"Tool not found: {tool_name}"}
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}
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except Exception as e:
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response = {
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"jsonrpc": "2.0",
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"id": msg_id,
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"error": {"code": -32000, "message": str(e)}
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}
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else:
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"jsonrpc": "2.0",
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"id": msg_id,
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"error": {"code": -32601, "message": f"Method not found: {method}"}
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}
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# Send response through SSE
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await sse_connections[session_id].put(response)
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except Exception as e:
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logger.error(f"Error
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})
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async def
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"""
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<html>
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<li><strong>SSE:</strong> <code>/sse</code></li>
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<li><strong>Messages:</strong> <code>/messages/</code></li>
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<li><strong>Health:</strong> <code>/health</code></li>
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</ul>
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<h2>Status: ✅ Running</h2>
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<p>Connect with: <code>{"url": "https://your-space.hf.space/sse"}</code></p>
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</body>
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</html>
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"""
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return HTMLResponse(html)
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Route("/sse", handle_sse),
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Route("/messages/", handle_messages, methods=["POST"]),
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]
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)
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logger.info(f"Starting MCP SSE server on {host}:{port}")
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logger.info(f"SSE Endpoint: http://{host}:{port}/sse")
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logger.info(f"Messages Endpoint: http://{host}:{port}/messages/")
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uvicorn.run(
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app,
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host=host,
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port=port,
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log_level="info"
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)
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def run_stdio_server():
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"""Run MCP server in stdio mode."""
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from mcp_service import mcp
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logger.info("Starting
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mcp.run()
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def main():
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parser = argparse.ArgumentParser(
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description="MaTableGPT MCP Server - Table Data Extraction from Materials Science Literature"
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)
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parser.add_argument(
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'--host',
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default=default_host,
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help=f'Host address (default: {default_host})'
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)
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parser.add_argument(
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'--port',
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type=int,
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default=default_port,
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help=f'Port number (default: {default_port})'
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)
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parser.add_argument(
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'--mode',
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choices=['stdio', 'sse'],
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default='sse',
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help='Run mode: stdio for standard I/O, sse for Server-Sent Events (default: sse)'
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)
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parser.add_argument(
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'--debug',
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action='store_true',
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help='Enable debug logging'
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)
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args = parser.parse_args()
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missing = check_dependencies()
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if missing:
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logger.error(f"Missing required packages: {', '.join(missing)}")
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logger.error(f"Install with: pip install {' '.join(missing)}")
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sys.exit(1)
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# Check environment
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warnings = check_environment()
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for warning in warnings:
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logger.warning(warning)
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# Display startup info
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logger.info("=" * 60)
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logger.info("MaTableGPT MCP Server")
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logger.info("=" * 60)
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logger.info(f"Mode: {args.mode}")
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if args.mode == 'sse':
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logger.info(f"Host: {args.host}")
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logger.info(f"Port: {args.port}")
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logger.info(f"SSE Endpoint: http://{args.host}:{args.port}/sse")
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logger.info("=" * 60)
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else:
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run_sse_server(args.host, args.port)
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except ImportError as e:
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logger.error(f"Failed to import required module: {e}")
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logger.error("Make sure all dependencies are installed: pip install -r requirements.txt")
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sys.exit(1)
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except Exception as e:
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logger.error(f"Error starting MCP server: {e}")
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import traceback
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traceback.print_exc()
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sys.exit(1)
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if __name__ == "__main__":
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#!/usr/bin/env python3
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"""
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MaTableGPT MCP Server Launcher (Simplified SSE)
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================================================
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A minimal MCP SSE server implementation for HuggingFace Space.
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Usage:
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python start_mcp.py [--host HOST] [--port PORT] [--mode MODE]
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"""
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import os
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import sys
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import argparse
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import logging
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import json
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import asyncio
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import uuid
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# Add current directory to path for imports
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sys.path.insert(0, os.path.dirname(os.path.abspath(__file__)))
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level=logging.INFO,
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format='%(asctime)s - %(name)s - %(levelname)s - %(message)s'
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)
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logger = logging.getLogger("matablgpt-mcp")
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def run_sse_server(host: str, port: int):
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"""Run MCP server in SSE mode."""
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import uvicorn
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from starlette.applications import Starlette
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from starlette.routing import Route
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from starlette.responses import JSONResponse, HTMLResponse, StreamingResponse
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from starlette.requests import Request
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# Import MCP service
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from mcp_service import mcp
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# Store SSE connections
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connections = {}
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async def sse_endpoint(request: Request):
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"""SSE endpoint - client connects here first."""
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conn_id = str(uuid.uuid4())
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queue = asyncio.Queue()
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connections[conn_id] = queue
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logger.info(f"SSE connection: {conn_id}")
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async def generate():
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try:
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# Send the message endpoint URL
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# MCP expects: event: endpoint, data: /messages?sessionId=xxx
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yield f"event: endpoint\ndata: /messages?sessionId={conn_id}\n\n"
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+
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| 59 |
+
while True:
|
| 60 |
+
try:
|
| 61 |
+
msg = await asyncio.wait_for(queue.get(), timeout=30)
|
| 62 |
+
yield f"event: message\ndata: {json.dumps(msg)}\n\n"
|
| 63 |
+
except asyncio.TimeoutError:
|
| 64 |
+
yield ": keepalive\n\n"
|
| 65 |
+
except asyncio.CancelledError:
|
| 66 |
+
pass
|
| 67 |
+
finally:
|
| 68 |
+
connections.pop(conn_id, None)
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| 69 |
+
logger.info(f"SSE closed: {conn_id}")
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| 70 |
|
| 71 |
return StreamingResponse(
|
| 72 |
+
generate(),
|
| 73 |
media_type="text/event-stream",
|
| 74 |
headers={
|
| 75 |
"Cache-Control": "no-cache",
|
| 76 |
"Connection": "keep-alive",
|
| 77 |
+
"X-Accel-Buffering": "no",
|
| 78 |
}
|
| 79 |
)
|
| 80 |
|
| 81 |
+
async def messages_endpoint(request: Request):
|
| 82 |
+
"""Messages endpoint - client sends JSON-RPC here."""
|
| 83 |
+
session_id = request.query_params.get("sessionId")
|
| 84 |
+
|
| 85 |
+
if not session_id or session_id not in connections:
|
| 86 |
+
return JSONResponse({"error": "Invalid session"}, status_code=400)
|
| 87 |
+
|
| 88 |
try:
|
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|
| 89 |
body = await request.json()
|
| 90 |
+
logger.info(f"Request: {body.get('method')}")
|
| 91 |
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|
| 92 |
method = body.get("method", "")
|
| 93 |
params = body.get("params", {})
|
| 94 |
msg_id = body.get("id")
|
| 95 |
|
| 96 |
+
# Process MCP methods
|
| 97 |
if method == "initialize":
|
| 98 |
+
result = {
|
| 99 |
+
"protocolVersion": "2024-11-05",
|
| 100 |
+
"serverInfo": {"name": "MaTableGPT-MCP", "version": "1.0.0"},
|
| 101 |
+
"capabilities": {"tools": {}}
|
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|
| 102 |
}
|
| 103 |
+
elif method == "notifications/initialized":
|
| 104 |
+
# Just acknowledge, no response needed
|
| 105 |
+
return JSONResponse({"ok": True})
|
| 106 |
elif method == "tools/list":
|
|
|
|
| 107 |
tools = []
|
| 108 |
+
for name, func in mcp._tool_manager._tools.items():
|
| 109 |
+
tools.append({
|
| 110 |
+
"name": name,
|
| 111 |
+
"description": (func.__doc__ or "").split("\n")[0].strip(),
|
| 112 |
"inputSchema": {"type": "object", "properties": {}}
|
| 113 |
+
})
|
| 114 |
+
result = {"tools": tools}
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 115 |
elif method == "tools/call":
|
| 116 |
tool_name = params.get("name")
|
| 117 |
tool_args = params.get("arguments", {})
|
| 118 |
|
| 119 |
+
if tool_name not in mcp._tool_manager._tools:
|
| 120 |
+
raise Exception(f"Unknown tool: {tool_name}")
|
| 121 |
+
|
| 122 |
+
tool_result = mcp._tool_manager._tools[tool_name](**tool_args)
|
| 123 |
+
result = {"content": [{"type": "text", "text": json.dumps(tool_result)}]}
|
|
|
|
|
|
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|
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|
|
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|
|
|
|
| 124 |
else:
|
| 125 |
+
raise Exception(f"Unknown method: {method}")
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 126 |
|
| 127 |
+
response = {"jsonrpc": "2.0", "id": msg_id, "result": result}
|
| 128 |
|
| 129 |
except Exception as e:
|
| 130 |
+
logger.error(f"Error: {e}")
|
| 131 |
+
response = {
|
| 132 |
+
"jsonrpc": "2.0",
|
| 133 |
+
"id": body.get("id"),
|
| 134 |
+
"error": {"code": -32000, "message": str(e)}
|
| 135 |
+
}
|
| 136 |
+
|
| 137 |
+
# Send via SSE
|
| 138 |
+
await connections[session_id].put(response)
|
| 139 |
+
return JSONResponse({"ok": True})
|
| 140 |
+
|
| 141 |
+
async def health(request: Request):
|
| 142 |
+
return JSONResponse({"status": "ok", "service": "MaTableGPT-MCP"})
|
| 143 |
+
|
| 144 |
+
async def home(request: Request):
|
| 145 |
+
html = """<!DOCTYPE html>
|
| 146 |
+
<html><head><title>MaTableGPT MCP</title></head>
|
| 147 |
+
<body>
|
| 148 |
+
<h1>🔬 MaTableGPT MCP Service</h1>
|
| 149 |
+
<p>SSE Endpoint: <code>/sse</code></p>
|
| 150 |
+
<p>Status: ✅ Running</p>
|
| 151 |
+
</body></html>"""
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 152 |
return HTMLResponse(html)
|
| 153 |
|
| 154 |
+
app = Starlette(routes=[
|
| 155 |
+
Route("/", home),
|
| 156 |
+
Route("/health", health),
|
| 157 |
+
Route("/sse", sse_endpoint),
|
| 158 |
+
Route("/messages", messages_endpoint, methods=["POST"]),
|
| 159 |
+
])
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 160 |
|
| 161 |
+
logger.info(f"Starting SSE server on {host}:{port}")
|
| 162 |
+
uvicorn.run(app, host=host, port=port, log_level="info")
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 163 |
|
| 164 |
|
| 165 |
def run_stdio_server():
|
| 166 |
"""Run MCP server in stdio mode."""
|
| 167 |
from mcp_service import mcp
|
| 168 |
+
logger.info("Starting stdio mode...")
|
| 169 |
mcp.run()
|
| 170 |
|
| 171 |
|
| 172 |
def main():
|
| 173 |
+
parser = argparse.ArgumentParser(description="MaTableGPT MCP Server")
|
| 174 |
+
parser.add_argument('--host', default=os.environ.get('MCP_HOST', '0.0.0.0'))
|
| 175 |
+
parser.add_argument('--port', type=int, default=int(os.environ.get('MCP_PORT', '7860')))
|
| 176 |
+
parser.add_argument('--mode', choices=['stdio', 'sse'], default='sse')
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 177 |
|
| 178 |
args = parser.parse_args()
|
| 179 |
|
| 180 |
+
# Log API config
|
| 181 |
+
api_base = os.environ.get('LLM_API_BASE') or os.environ.get('OPENAI_API_BASE')
|
| 182 |
+
if api_base:
|
| 183 |
+
logger.info(f"API base: {api_base}")
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 184 |
|
| 185 |
+
if args.mode == 'stdio':
|
| 186 |
+
run_stdio_server()
|
| 187 |
+
else:
|
| 188 |
+
run_sse_server(args.host, args.port)
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 189 |
|
| 190 |
|
| 191 |
if __name__ == "__main__":
|