--- title: Virtual Gene Scope v2.0 emoji: ๐Ÿงฌ colorFrom: purple colorTo: blue sdk: docker app_port: 8501 pinned: false license: apache-2.0 tags: - streamlit - nursing - genomics - alphagenome - pharmacogenomics - uk-nursing - nmc --- # ๐Ÿงฌ Virtual Gene Scope v2.0 **Explore the Regulatory Genome with Google DeepMind's AlphaGenome.** An educational tool for nursing students and healthcare professionals to visualise how non-coding genetic variants affect gene regulation โ€” covering expression, splicing, chromatin accessibility, and contact maps. > *Built by nurses who code. For nurses who care about genomics.* > *Part of the [CQAI Nursing Education Toolkit](https://github.com/Clinical-Quality-Artifical-Intelligence)* --- ## โš•๏ธ Clinical Disclaimer This tool is for **educational purposes only**. It does not make clinical decisions and must not be used for patient care without independent verification by qualified healthcare professionals. --- ## โœจ Features - ๐Ÿฅ **Disease Risk Mode** โ€” Explore pathogenic variants in 8 disease-associated genes - ๐Ÿ’Š **Drug Response Mode (PGx)** โ€” See how variants affect drug metabolism (8 PGx genes) - ๐Ÿงช **Custom Variant Mode** โ€” Input any variant and see predicted effects - ๐Ÿซ€ **Tissue Context** โ€” Select from 10 tissue types with UBERON ontology terms - ๐Ÿ“Š **Multi-modal Demo Tracks** โ€” RNA expression, splicing, chromatin accessibility - ๐Ÿ‘ฉโ€โš•๏ธ **Nursing Reference Cards** โ€” NMC-aligned clinical guidance per gene - ๐Ÿ“Ž **DOCX Report Export** โ€” Download a formatted gene analysis report - ๐Ÿ”— **ClinVar / PharmGKB / OMIM links** โ€” Direct links to authoritative databases - ๐ŸŽ“ **NMC Proficiency Map** โ€” Standards of Proficiency alignment per gene