Upload LTAF ECG beat classifier (N/A/V), frozen Chronos-2 + MLP head
Browse files- README.md +77 -0
- best_classifier.pt +3 -0
README.md
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---
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library_name: pytorch
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tags:
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- ecg
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- classification
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- chronos-2
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- ltaf
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- arrhythmia
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license: mit
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---
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# LTAF ECG Beat Classifier (N / A / V)
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Frozen **Chronos-2** (`amazon/chronos-2`) multivariate encoder + MLP head,
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trained on the PhysioNet Long-Term Atrial Fibrillation (LTAF) database
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for per-beat classification.
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## Classes
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| Code | Expansion |
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|------|-----------|
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| N | Normal sinus-origin beat |
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| A | Atrial premature contraction (APC / PAC / SVE) |
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| V | Ventricular premature contraction (PVC / VE) |
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`Q` (unclassifiable / paced, ~89 / 9 M in the LTAF subset) is dropped.
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## Input
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- `(B, 2, 256)` — 2-lead ECG at **128 Hz**, 2-second window **centered on the R-peak sample**
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- Per-channel z-scored
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- LTAF leads: `ECG1`, `ECG2`
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## Checkpoint details
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| Field | Value |
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|---|---|
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| `num_classes` | 3 |
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| `class_names` | `["N", "A", "V"]` |
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| `window_samples` | 256 (2 s @ 128 Hz) |
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| `n_channels` | 2 |
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| `chronos_model_id` | `amazon/chronos-2` |
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| `freeze_encoder` | `true` (only the head's 395,267 params were trained) |
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| Head | 2-layer MLP: `Linear(1024, 512) → ReLU → Dropout(0.3) → Linear(512, 3)` |
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## Usage
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```python
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import torch
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from huggingface_hub import hf_hub_download
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from src.models.ts_llm.ecg_classifier import EcgRhythmClassifier
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path = hf_hub_download("rmxjck/ltaf-ecg-beats-classifier", "best_classifier.pt")
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model = EcgRhythmClassifier.load(path, device="cuda")
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# x: (B, 2, 256) float32 at 128 Hz, z-scored, centered on R-peak
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logits = model(x)
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pred = logits.argmax(-1) # 0=N, 1=A, 2=V
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```
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## Training
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Produced by `scripts/train_ecg_classifier.py` in
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[rmxjck/TSLM-Arena](https://github.com/) on the LTAF-Haystack split
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(67 train / 8 val / 9 test records, deterministic seed 42). N beats are
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subsampled per epoch to `negative_k × n_nonN` (default 2.0) to balance
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the 97 % N / 1.7 % A / 1.5 % V class distribution.
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```bash
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.venv/bin/python3 scripts/train_ecg_classifier.py \
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--label-class beats --epochs 30 --batch-size 128
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```
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## Not for clinical use
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Research artifact only. Not FDA-cleared. Not suitable for triage,
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diagnosis, or any patient-facing application.
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best_classifier.pt
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@@ -0,0 +1,3 @@
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version https://git-lfs.github.com/spec/v1
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oid sha256:aa800ad254acc9151f020846e335a2c964e73f14ea0366950caea2bcb5f34f07
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size 1583853
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