Daily Papers

Automated animal face identification plays a crucial role in the monitoring of behaviors, conducting of surveys, and finding of lost animals. Despite the advancements in human face identification, the lack of datasets and benchmarks in the animal domain has impeded progress. In this paper, we introduce the PetFace dataset, a comprehensive resource for animal face identification encompassing 257,484 unique individuals across 13 animal families and 319 breed categories, including both experimental and pet animals. This large-scale collection of individuals facilitates the investigation of unseen animal face verification, an area that has not been sufficiently explored in existing datasets due to the limited number of individuals. Moreover, PetFace also has fine-grained annotations such as sex, breed, color, and pattern. We provide multiple benchmarks including re-identification for seen individuals and verification for unseen individuals. The models trained on our dataset outperform those trained on prior datasets, even for detailed breed variations and unseen animal families. Our result also indicates that there is some room to improve the performance of integrated identification on multiple animal families. We hope the PetFace dataset will facilitate animal face identification and encourage the development of non-invasive animal automatic identification methods.

Simple data augmentation techniques, such as rotations and flips, are widely used to enhance the generalization power of computer vision models. However, these techniques often fail to modify high-level semantic attributes of a class. To address this limitation, researchers have explored generative augmentation methods like the recently proposed DA-Fusion. Despite some progress, the variations are still largely limited to textural changes, thus falling short on aspects like varied viewpoints, environment, weather conditions, or even class-level semantic attributes (eg, variations in a dog's breed). To overcome this challenge, we propose DIAGen, building upon DA-Fusion. First, we apply Gaussian noise to the embeddings of an object learned with Textual Inversion to diversify generations using a pre-trained diffusion model's knowledge. Second, we exploit the general knowledge of a text-to-text generative model to guide the image generation of the diffusion model with varied class-specific prompts. Finally, we introduce a weighting mechanism to mitigate the impact of poorly generated samples. Experimental results across various datasets show that DIAGen not only enhances semantic diversity but also improves the performance of subsequent classifiers. The advantages of DIAGen over standard augmentations and the DA-Fusion baseline are particularly pronounced with out-of-distribution samples.

This dataset represents almost all the harmful diseases for rice in Bangladesh. This dataset consists of 1106 image of five harmful diseases called Brown Spot, Leaf Scaled, Rice Blast, Rice Turngo, Steath Blight in two different background variation named field background picture and white background picture. Two different background variation helps the dataset to perform more accurately so that the user can use this data for field use as well as white background for decision making. The data is collected from rice field of Dhaka Division. This dataset can use for rice leaf diseases classification, diseases detection using Computer Vision and Pattern Recognition for different rice leaf disease.

Flower breed detection and giving details of that breed with the suggestion of cultivation processes and the way of taking care is important for flower cultivation, breed invention, and the flower business. Among all the local flowers in Bangladesh, the rose is one of the most popular and demanded flowers. Roses are the most desirable flower not only in Bangladesh but also throughout the world. Roses can be used for many other purposes apart from decoration. As roses have a great demand in the flower business so rose breed detection will be very essential. However, there is no remarkable work for breed detection of a particular flower unlike the classification of different flowers. In this research, we have proposed a model to detect rose breeds from images using transfer learning techniques. For such work in flowers, resources are not enough in image processing and classification, so we needed a large dataset of the massive number of images to train our model. we have used 1939 raw images of five different breeds and we have generated 9306 images for the training dataset and 388 images for the testing dataset to validate the model using augmentation. We have applied four transfer learning models in this research, which are Inception V3, ResNet50, Xception, and VGG16. Among these four models, VGG16 achieved the highest accuracy of 99%, which is an excellent outcome. Breed detection of a rose by using transfer learning methods is the first work on breed detection of a particular flower that is publicly available according to the study.

Wheat varieties show a large diversity of traits and phenotypes. Linking them to genetic variability is essential for shorter and more efficient wheat breeding programs. Newly desirable wheat variety traits include disease resistance to reduce pesticide use, adaptation to climate change, resistance to heat and drought stresses, or low gluten content of grains. Wheat breeding experiments are documented by a large body of scientific literature and observational data obtained in-field and under controlled conditions. The cross-referencing of complementary information from the literature and observational data is essential to the study of the genotype-phenotype relationship and to the improvement of wheat selection. The scientific literature on genetic marker-assisted selection describes much information about the genotype-phenotype relationship. However, the variety of expressions used to refer to traits and phenotype values in scientific articles is a hinder to finding information and cross-referencing it. When trained adequately by annotated examples, recent text mining methods perform highly in named entity recognition and linking in the scientific domain. While several corpora contain annotations of human and animal phenotypes, currently, no corpus is available for training and evaluating named entity recognition and entity-linking methods in plant phenotype literature. The Triticum aestivum trait Corpus is a new gold standard for traits and phenotypes of wheat. It consists of 540 PubMed references fully annotated for trait, phenotype, and species named entities using the Wheat Trait and Phenotype Ontology and the species taxonomy of the National Center for Biotechnology Information. A study of the performance of tools trained on the Triticum aestivum trait Corpus shows that the corpus is suitable for the training and evaluation of named entity recognition and linking.

Identifying subtle phenotypic variations in cellular images is critical for advancing biological research and accelerating drug discovery. These variations are often masked by the inherent cellular heterogeneity, making it challenging to distinguish differences between experimental conditions. Recent advancements in deep generative models have demonstrated significant potential for revealing these nuanced phenotypes through image translation, opening new frontiers in cellular and molecular biology as well as the identification of novel biomarkers. Among these generative models, diffusion models stand out for their ability to produce high-quality, realistic images. However, training diffusion models typically requires large datasets and substantial computational resources, both of which can be limited in biological research. In this work, we propose a novel approach that leverages pre-trained latent diffusion models to uncover subtle phenotypic changes. We validate our approach qualitatively and quantitatively on several small datasets of microscopy images. Our findings reveal that our approach enables effective detection of phenotypic variations, capturing both visually apparent and imperceptible differences. Ultimately, our results highlight the promising potential of this approach for phenotype detection, especially in contexts constrained by limited data and computational capacity.