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Apr 14

Properties of a kaon-condensed phase in hyperon-mixed matter with three-baryon forces

Coexistent phase of kaon condensates and hyperons [(Y+K) phase] in beta equilibrium with electrons and muons is investigated as a possible form of dense hadronic phase with multi-strangeness. The effective chiral Lagrangian for kaon-baryon and kaon-kaon interactions is utilized within chiral symmetry approach in combination with the interaction model between baryons. For the baryon-baryon interactions, we adopt the minimal relativistic mean-field theory with exchange of scalar mesons and vector mesons between baryons without including the nonlinear self-interacting meson field terms. In addition, the universal three-baryon repulsion and the phenomenological three-nucleon attraction are introduced as density-dependent effective two-body potentials. The repulsive effects leading to stiff equation of state at high densities consist of both the two-baryon repulsion via the vector-meson exchange and the universal three-baryon repulsion. Interplay of kaon condensates with hyperons through chiral dynamics in dense matter is clarified, and resulting onset mechanisms of kaon condensation in hyperon-mixed matter and the equation of state with the (Y+K) phase and characteristic features of the system are presented. It is shown that the slope L of the symmetry energy controls the two-baryon repulsion beyond the saturation density and resulting stiffness of the equation of state. The stiffness of the equation of state in turn controls admixture of hyperons and the onset and development of kaon condensates as a result of competing effect between kaon condensates and hyperons. The equation of state with the (Y+K) phase becomes stiff enough to be consistent with recent observations of massive neutron stars. Static properties of neutron stars with the (Y+K) phase are discussed.

  • 1 authors
·
Nov 15, 2024

Mycorrhiza: Genotype Assignment usingPhylogenetic Networks

Motivation The genotype assignment problem consists of predicting, from the genotype of an individual, which of a known set of populations it originated from. The problem arises in a variety of contexts, including wildlife forensics, invasive species detection and biodiversity monitoring. Existing approaches perform well under ideal conditions but are sensitive to a variety of common violations of the assumptions they rely on. Results In this article, we introduce Mycorrhiza, a machine learning approach for the genotype assignment problem. Our algorithm makes use of phylogenetic networks to engineer features that encode the evolutionary relationships among samples. Those features are then used as input to a Random Forests classifier. The classification accuracy was assessed on multiple published empirical SNP, microsatellite or consensus sequence datasets with wide ranges of size, geographical distribution and population structure and on simulated datasets. It compared favorably against widely used assessment tests or mixture analysis methods such as STRUCTURE and Admixture, and against another machine-learning based approach using principal component analysis for dimensionality reduction. Mycorrhiza yields particularly significant gains on datasets with a large average fixation index (FST) or deviation from the Hardy-Weinberg equilibrium. Moreover, the phylogenetic network approach estimates mixture proportions with good accuracy.

  • 3 authors
·
Oct 13, 2020