Add AI Model Council: phd_research_os/council.py

Add Superpowers Skill Tree + Meta-Improver: phd_research_os/meta_improver.py

Add Superpowers Skill Tree + Meta-Improver: phd_research_os/skills/registry.py

Add Superpowers Skill Tree + Meta-Improver: phd_research_os/skills/__init__.py

Add Quantum-Bio taxonomy V2: phd_research_os/taxonomy.py

Add ECC Harness: phd_research_os/HARNESS_EVOLUTION.md

Add ECC Harness: phd_research_os/plan.md

Add ECC Harness: phd_research_os/MEMORY.md

Add ECC Harness: phd_research_os/AGENTS.md

Add ECC Harness: phd_research_os/ARCHITECTURE.md

Add ECC Harness: phd_research_os/agent_os.py

Add phd_research_os/backup.py

Add phd_research_os/conflict_detector.py

Add phd_research_os/evaluation.py

Add phd_research_os/obsidian_export.py

Add phd_research_os/pipeline.py

Add phd_research_os/agents.py

Add phd_research_os/db.py

Add phd_research_os/__init__.py