GeneMamba / .gitignore
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# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
*$py.class
# C extensions
*.so
# Distribution / packaging
.Python
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib/
lib64/
parts/
sdist/
var/
wheels/
pip-wheel-metadata/
share/python-wheels/
*.egg-info/
.installed.cfg
*.egg
MANIFEST
# PyInstaller
*.manifest
*.spec
# Unit test / coverage reports
htmlcov/
.tox/
.nox/
.coverage
.coverage.*
.cache
nosetests.xml
coverage.xml
*.cover
*.py,cover
.hypothesis/
.pytest_cache/
# Jupyter Notebook
.ipynb_checkpoints
# IPython
profile_default/
ipython_config.py
# pyenv
.python-version
# Environments
.env
.venv
env/
venv/
ENV/
env.bak/
venv.bak/
# IDE
.vscode/
.idea/
*.swp
*.swo
*~
# OS
.DS_Store
Thumbs.db
# Project specific
results/
*.npy
*.pkl
*.pt
*.pth
checkpoint*/
pretrain_results/
classification_results/
my_genemamba_*
from_scratch_pretrain/
cell_embeddings.npy
runs/