hlapp commited on
Commit
4398a0e
·
verified ·
1 Parent(s): 893458d

Best model for K562 data downsampled to 1M

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Downsampling was unbiased, loss function was MSE.

K562/Unbiased_downsampling/1M/K562-10.h5 ADDED
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+ size 63138304
K562/Unbiased_downsampling/1M/K562-10.json ADDED
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K562/Unbiased_downsampling/1M/K562-MSELoss-downsampled1M.config ADDED
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+ UseCustomLoss = 0
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+ Tasks = K562
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+ TaskWeights = 1
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+ Verbose = 2
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+ NumConvLayers = 5
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+ KernelSizes = 8,16,32,64,128
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+ NumKernels = 1024,512,256,128,64
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+ MaxTrain=1000000
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+ MaxTest=999999999
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+ ShouldTest=1
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+ Epochs = 200
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+
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+ RevComp = 0
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+ BatchSize = 128
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+ EarlyStop = 10
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+ DropoutRate = 0.5
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+ LearningRate = 0.002
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+ ConvResidualSkip = 0
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+ ConvDropout = 1
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+ ConvPad = same
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+ DilationFactor = 1
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+ ConvPoolSize = 1
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+ GlobalMaxPool = 0
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+ GlobalAvePool = 1
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+ NumDense = 0
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+ DenseSizes = 0
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+ NumAttentionLayers = 0
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+ AttentionHeads = 0
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+ AttentionKeyDim = 0
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+ AttentionResidualSkip = 0
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+
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+
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+
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+