guanwencan commited on
Commit
2eecd10
·
verified ·
1 Parent(s): aed0c33

Upload Pseudocode.md

Browse files
Files changed (1) hide show
  1. Pseudocode.md +449 -0
Pseudocode.md ADDED
@@ -0,0 +1,449 @@
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
1
+ # RBA Regression Model Pseudocode
2
+
3
+ ## Main Experiment Flow
4
+
5
+ ```
6
+ ALGORITHM: RBA Regression Experiment
7
+ INPUT: data_path, random_state
8
+ OUTPUT: comprehensive_results, visualizations
9
+
10
+ PROCEDURE main_experiment():
11
+ 1. INITIALIZE experiment environment
12
+ SET random seeds for reproducibility
13
+ CONFIGURE matplotlib for publication quality (Times New Roman, 14pt)
14
+
15
+ 2. LOAD and PREPROCESS data
16
+ LOAD California Housing dataset from data_path
17
+ HANDLE missing values and outliers
18
+ SPLIT data into train/test sets (80/20)
19
+ APPLY StandardScaler to features and targets
20
+
21
+ 3. CREATE model architectures
22
+ INITIALIZE RBA(input_dim, hidden_dim=128, heads=8, layers=3)
23
+ INITIALIZE Transformer(input_dim, hidden_dim=128, heads=8, layers=3)
24
+
25
+ 4. TRAIN models
26
+ FOR each model:
27
+ TRAIN using Adam optimizer with early stopping
28
+ APPLY learning rate scheduling
29
+ MONITOR validation loss for convergence
30
+
31
+ 5. EVALUATE performance
32
+ COMPUTE regression metrics (RMSE, MAE, R², CV, MAPE)
33
+ ANALYZE uncertainty quantification (RBA only)
34
+ PERFORM cross-validation analysis
35
+
36
+ 6. CONDUCT ablation study
37
+ TRAIN ablation variants (NoGP, NoResidual, NoUncertainty, NoLayerNorm)
38
+ COMPARE component importance
39
+
40
+ 7. GENERATE results
41
+ PRINT comprehensive statistical analysis
42
+ CREATE geographic visualizations
43
+ SAVE publication-quality figures
44
+ ```
45
+
46
+ ## Core Model Architecture
47
+
48
+ ```
49
+ CLASS ResidualBayesianAttention:
50
+ INPUTS: input_dim, hidden_dim, num_heads, num_layers, dropout, gp_kernel_type
51
+
52
+ COMPONENTS:
53
+ input_embedding: Linear(input_dim → hidden_dim)
54
+ attention_layers: List[BayesianMultiHeadAttention]
55
+ layer_norms: List[LayerNorm]
56
+ feedforward_layers: List[BayesianFeedForward]
57
+ residual_weights: List[Parameter([0.5, 0.5])]
58
+ output_projection: Linear(hidden_dim → 1)
59
+ uncertainty_head: Linear(hidden_dim → 1) + Softplus
60
+
61
+ FORWARD(x):
62
+ h = input_embedding(x)
63
+ attention_uncertainties = []
64
+
65
+ FOR layer_i in range(num_layers):
66
+ residual_input = h
67
+ h_norm = layer_norms[i](h)
68
+ attention_output, uncertainty = attention_layers[i](h_norm)
69
+ attention_uncertainties.append(uncertainty)
70
+
71
+ alpha, beta = softmax(residual_weights[i])
72
+ h = alpha * residual_input + beta * attention_output
73
+
74
+ residual_input = h
75
+ h_norm = ff_layer_norms[i](h)
76
+ ff_output = feedforward_layers[i](h_norm)
77
+ h = alpha * residual_input + beta * ff_output
78
+
79
+ h_pooled = mean(h, dim=sequence)
80
+ prediction = output_projection(h_pooled)
81
+ uncertainty = uncertainty_head(h_pooled)
82
+
83
+ total_uncertainty = uncertainty + mean(attention_uncertainties)
84
+
85
+ RETURN prediction, total_uncertainty
86
+ ```
87
+
88
+ ## Bayesian Multi-Head Attention
89
+
90
+ ```
91
+ CLASS BayesianMultiHeadAttention:
92
+ INPUTS: hidden_dim, num_heads, dropout, gp_kernel_type
93
+
94
+ COMPONENTS:
95
+ q_proj, k_proj, v_proj, o_proj: Linear projections
96
+ length_scale: Parameter(ones(num_heads))
97
+ signal_variance: Parameter(ones(num_heads))
98
+ dropout: Dropout(dropout)
99
+
100
+ COMPUTE_GP_KERNEL(x):
101
+ batch_size, seq_len, hidden_dim = x.shape
102
+ x_expanded = unsqueeze(x, dim=2)
103
+ x_tiled = unsqueeze(x, dim=1)
104
+ distances = norm(x_expanded - x_tiled, dim=-1)
105
+
106
+ kernel_matrices = []
107
+ FOR head_h in range(num_heads):
108
+ kernel = signal_variance[h]² * exp(-distances² / (2 * length_scale[h]²))
109
+ kernel_matrices.append(kernel)
110
+
111
+ RETURN stack(kernel_matrices, dim=1)
112
+
113
+ FORWARD(x):
114
+ batch_size, seq_len, _ = x.shape
115
+
116
+ Q = reshape_multihead(q_proj(x))
117
+ K = reshape_multihead(k_proj(x))
118
+ V = reshape_multihead(v_proj(x))
119
+
120
+ attention_scores = matmul(Q, transpose(K, -2, -1)) * scale
121
+ gp_kernel = compute_gp_kernel(x)
122
+ enhanced_scores = attention_scores + gp_kernel
123
+
124
+ attention_weights = softmax(enhanced_scores, dim=-1)
125
+ attention_weights = dropout(attention_weights)
126
+
127
+ attention_output = matmul(attention_weights, V)
128
+ output = o_proj(reshape_back(attention_output))
129
+
130
+ attention_entropy = -sum(attention_weights * log(attention_weights + ε), dim=-1)
131
+ uncertainty = mean(attention_entropy, dim=(1, 2))
132
+
133
+ RETURN output, uncertainty
134
+ ```
135
+
136
+ ## Training Procedure
137
+
138
+ ```
139
+ PROCEDURE train_model(model, train_loader, val_loader, epochs, lr):
140
+ optimizer = Adam(model.parameters(), lr=lr, weight_decay=1e-5)
141
+ scheduler = ReduceLROnPlateau(optimizer, patience=10, factor=0.5)
142
+
143
+ best_val_loss = infinity
144
+ patience_counter = 0
145
+ patience = 20
146
+
147
+ FOR epoch in range(epochs):
148
+ model.train()
149
+ train_loss = 0
150
+
151
+ FOR batch_x, batch_y in train_loader:
152
+ optimizer.zero_grad()
153
+
154
+ IF isinstance(model, ResidualBayesianAttention):
155
+ prediction, uncertainty = model(batch_x)
156
+ loss = MSE(squeeze(prediction), batch_y)
157
+ uncertainty_loss = mean(uncertainty)
158
+ loss = loss + 0.01 * uncertainty_loss
159
+ ELSE:
160
+ prediction = model(batch_x)
161
+ loss = MSE(squeeze(prediction), batch_y)
162
+
163
+ loss.backward()
164
+ clip_grad_norm(model.parameters(), max_norm=1.0)
165
+ optimizer.step()
166
+ train_loss += loss.item()
167
+
168
+ model.eval()
169
+ val_loss = 0
170
+
171
+ WITH no_grad():
172
+ FOR batch_x, batch_y in val_loader:
173
+ IF isinstance(model, ResidualBayesianAttention):
174
+ prediction, _ = model(batch_x)
175
+ ELSE:
176
+ prediction = model(batch_x)
177
+ loss = MSE(squeeze(prediction), batch_y)
178
+ val_loss += loss.item()
179
+
180
+ train_loss /= len(train_loader)
181
+ val_loss /= len(val_loader)
182
+
183
+ scheduler.step(val_loss)
184
+
185
+ IF val_loss < best_val_loss:
186
+ best_val_loss = val_loss
187
+ patience_counter = 0
188
+ save_model(model, 'best_model.pth')
189
+ ELSE:
190
+ patience_counter += 1
191
+ IF patience_counter >= patience:
192
+ BREAK
193
+
194
+ load_model(model, 'best_model.pth')
195
+ RETURN train_losses, val_losses
196
+ ```
197
+
198
+ ## Evaluation and Analysis
199
+
200
+ ```
201
+ PROCEDURE evaluate_comprehensive(model, test_loader, X_test, y_test_original):
202
+ model.eval()
203
+ predictions = []
204
+ uncertainties = []
205
+
206
+ WITH no_grad():
207
+ FOR batch_x, _ in test_loader:
208
+ IF isinstance(model, ResidualBayesianAttention):
209
+ pred, uncertainty = model(batch_x)
210
+ IF len(uncertainty.shape) > 1:
211
+ uncertainty = squeeze(uncertainty)
212
+ uncertainties.extend(uncertainty.cpu().numpy())
213
+ ELSE:
214
+ pred = model(batch_x)
215
+ predictions.extend(squeeze(pred).cpu().numpy())
216
+
217
+ predictions = array(predictions)
218
+ predictions_original = inverse_transform(predictions.reshape(-1, 1)).flatten()
219
+
220
+ metrics = {
221
+ 'MSE': mean_squared_error(y_test_original, predictions_original),
222
+ 'RMSE': sqrt(MSE),
223
+ 'MAE': mean_absolute_error(y_test_original, predictions_original),
224
+ 'R²': r2_score(y_test_original, predictions_original),
225
+ 'MAPE': mean(abs((y_test_original - predictions_original) / y_test_original)) * 100,
226
+ 'CV': (RMSE / mean(y_test_original)) * 100,
227
+ 'Explained_Variance': 1 - (var(y_test_original - predictions_original) / var(y_test_original))
228
+ }
229
+
230
+ IF len(uncertainties) > 0:
231
+ uncertainties = array(uncertainties)
232
+ uncertainties_scaled = uncertainties * target_scaler.scale_[0]
233
+ prediction_intervals = {
234
+ 'lower_95': predictions_original - 1.96 * uncertainties_scaled,
235
+ 'upper_95': predictions_original + 1.96 * uncertainties_scaled,
236
+ 'mean_interval_width': mean(3.92 * uncertainties_scaled)
237
+ }
238
+ metrics['prediction_intervals'] = prediction_intervals
239
+
240
+ RETURN metrics
241
+ ```
242
+
243
+ ## Cross-Validation Analysis
244
+
245
+ ```
246
+ PROCEDURE cross_validation_analysis(X, y):
247
+ kf = KFold(n_splits=5, shuffle=True, random_state=random_state)
248
+
249
+ rba_cv_scores = []
250
+ transformer_cv_scores = []
251
+ rba_cv_values = []
252
+ transformer_cv_values = []
253
+
254
+ fold = 1
255
+ FOR train_idx, val_idx in kf.split(X):
256
+ X_train_cv, X_val_cv = X[train_idx], X[val_idx]
257
+ y_train_cv, y_val_cv = y[train_idx], y[val_idx]
258
+
259
+ scaler_X = StandardScaler()
260
+ scaler_y = StandardScaler()
261
+
262
+ X_train_cv_scaled = scaler_X.fit_transform(X_train_cv)
263
+ X_val_cv_scaled = scaler_X.transform(X_val_cv)
264
+ y_train_cv_scaled = scaler_y.fit_transform(y_train_cv.reshape(-1, 1)).flatten()
265
+
266
+ train_loader_cv, val_loader_cv = create_torch_datasets(
267
+ X_train_cv_scaled, X_val_cv_scaled, y_train_cv_scaled, y_train_cv_scaled[:len(X_val_cv_scaled)])
268
+
269
+ rba_model = ResidualBayesianAttention(input_dim=X.shape[1], hidden_dim=128, num_heads=8, num_layers=3)
270
+ train_model(rba_model, train_loader_cv, val_loader_cv, epochs=50)
271
+
272
+ transformer_model = StandardTransformer(input_dim=X.shape[1], hidden_dim=128, num_heads=8, num_layers=3)
273
+ train_model(transformer_model, train_loader_cv, val_loader_cv, epochs=50)
274
+
275
+ rba_metrics = evaluate_comprehensive(rba_model, val_loader_cv, X_val_cv, y_val_cv)
276
+ transformer_metrics = evaluate_comprehensive(transformer_model, val_loader_cv, X_val_cv, y_val_cv)
277
+
278
+ rba_cv_scores.append(rba_metrics['R²'])
279
+ transformer_cv_scores.append(transformer_metrics['R²'])
280
+ rba_cv_values.append(rba_metrics['CV'])
281
+ transformer_cv_values.append(transformer_metrics['CV'])
282
+
283
+ fold += 1
284
+
285
+ RETURN {
286
+ 'rba_r2_scores': rba_cv_scores,
287
+ 'transformer_r2_scores': transformer_cv_scores,
288
+ 'rba_cv_values': rba_cv_values,
289
+ 'transformer_cv_values': transformer_cv_values
290
+ }
291
+ ```
292
+
293
+ ## Ablation Study Analysis
294
+
295
+ ```
296
+ PROCEDURE ablation_study_analysis(X, y):
297
+ ablation_models = {
298
+ 'Full RBA': ResidualBayesianAttention,
299
+ 'No GP Kernel': RBA_NoGPKernel,
300
+ 'No Residual': RBA_NoResidual,
301
+ 'No Uncertainty': RBA_NoUncertainty,
302
+ 'No LayerNorm': RBA_NoLayerNorm,
303
+ 'Transformer': StandardTransformer
304
+ }
305
+
306
+ results = {}
307
+
308
+ X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.2, random_state=random_state)
309
+
310
+ scaler_X = StandardScaler()
311
+ scaler_y = StandardScaler()
312
+
313
+ X_train_scaled = scaler_X.fit_transform(X_train)
314
+ X_test_scaled = scaler_X.transform(X_test)
315
+ y_train_scaled = scaler_y.fit_transform(y_train.reshape(-1, 1)).flatten()
316
+
317
+ train_loader, test_loader = create_torch_datasets(X_train_scaled, X_test_scaled, y_train_scaled, y_train_scaled[:len(X_test_scaled)])
318
+
319
+ FOR model_name, model_class in ablation_models.items():
320
+ model = model_class(input_dim=X.shape[1], hidden_dim=128, num_heads=8, num_layers=3)
321
+
322
+ train_losses, val_losses = train_model(model, train_loader, test_loader, epochs=50)
323
+
324
+ IF model_name == 'No Uncertainty':
325
+ predictions = []
326
+ WITH no_grad():
327
+ FOR batch_x, _ in test_loader:
328
+ pred = model(batch_x)
329
+ predictions.extend(squeeze(pred).cpu().numpy())
330
+
331
+ predictions = array(predictions)
332
+ predictions_original = scaler_y.inverse_transform(predictions.reshape(-1, 1)).flatten()
333
+
334
+ metrics = {
335
+ 'MSE': mean_squared_error(y_test, predictions_original),
336
+ 'RMSE': sqrt(MSE),
337
+ 'MAE': mean_absolute_error(y_test, predictions_original),
338
+ 'R²': r2_score(y_test, predictions_original),
339
+ 'MAPE': mean(abs((y_test - predictions_original) / y_test)) * 100,
340
+ 'CV': (RMSE / mean(y_test)) * 100,
341
+ 'predictions': predictions_original
342
+ }
343
+ ELSE:
344
+ metrics = evaluate_comprehensive(model, test_loader, X_test_scaled, y_test)
345
+
346
+ results[model_name] = metrics
347
+
348
+ RETURN results
349
+ ```
350
+
351
+ ## Statistical Analysis
352
+
353
+ ```
354
+ PROCEDURE statistical_analysis(rba_metrics, transformer_metrics):
355
+ rba_errors = abs(rba_metrics['residuals'])
356
+ trans_errors = abs(transformer_metrics['residuals'])
357
+
358
+ t_statistic, p_value = paired_t_test(trans_errors, rba_errors)
359
+ effect_size = t_statistic / sqrt(len(rba_errors))
360
+
361
+ significance_level = IF p_value < 0.001 THEN "***"
362
+ ELSE IF p_value < 0.01 THEN "**"
363
+ ELSE IF p_value < 0.05 THEN "*"
364
+ ELSE "ns"
365
+
366
+ IF rba_metrics['prediction_intervals']:
367
+ actual = y_test_original
368
+ intervals = rba_metrics['prediction_intervals']
369
+ coverage_95 = mean((actual >= intervals['lower_95']) & (actual <= intervals['upper_95'])) * 100
370
+
371
+ RETURN {
372
+ 't_statistic': t_statistic,
373
+ 'p_value': p_value,
374
+ 'effect_size': effect_size,
375
+ 'significance': significance_level,
376
+ 'coverage': coverage_95 if available else None
377
+ }
378
+ ```
379
+
380
+ ## Visualization Generation
381
+
382
+ ```
383
+ PROCEDURE plot_focused_analysis():
384
+ figure = create_figure(size=(20, 12))
385
+
386
+ # CV Comparison Box Plot
387
+ subplot1 = subplot(2, 3, 1)
388
+ cv_data = [cv_results['rba_cv_values'], cv_results['transformer_cv_values']]
389
+ boxplot(cv_data, labels=['RBA', 'Transformer'])
390
+ title('CV Comparison Across 5-Fold Cross-Validation')
391
+
392
+ # Geographic Distribution Plots
393
+ subplot2 = subplot(2, 3, 2)
394
+ scatter(coordinates[:, 0], coordinates[:, 1], c=y_true, cmap='viridis')
395
+ title('True House Values (Geographic Distribution)')
396
+
397
+ subplot3 = subplot(2, 3, 3)
398
+ scatter(coordinates[:, 0], coordinates[:, 1], c=rba_predictions, cmap='viridis')
399
+ title('RBA Predictions (Geographic Distribution)')
400
+
401
+ subplot4 = subplot(2, 3, 4)
402
+ scatter(coordinates[:, 0], coordinates[:, 1], c=transformer_predictions, cmap='viridis')
403
+ title('Transformer Predictions (Geographic Distribution)')
404
+
405
+ # Error Analysis
406
+ subplot5 = subplot(2, 3, 5)
407
+ error_difference = transformer_errors - rba_errors
408
+ scatter(coordinates[:, 0], coordinates[:, 1], c=error_difference, cmap='RdBu_r')
409
+ title('Error Improvement (Transformer Error - RBA Error)')
410
+
411
+ # Performance Summary Table
412
+ subplot6 = subplot(2, 3, 6)
413
+ create_performance_table(rba_metrics, transformer_metrics)
414
+
415
+ save_figure('Focused_RBA_vs_Transformer_Analysis', formats=['png', 'pdf'])
416
+ show()
417
+ ```
418
+
419
+ ## Component Importance Analysis
420
+
421
+ ```
422
+ PROCEDURE analyze_component_importance(ablation_results):
423
+ full_rba_metrics = ablation_results['Full RBA']
424
+ component_analysis = []
425
+
426
+ FOR model_name, metrics in ablation_results.items():
427
+ IF model_name != 'Full RBA':
428
+ rmse_change = ((metrics['RMSE'] - full_rba_metrics['RMSE']) / full_rba_metrics['RMSE']) * 100
429
+ r2_change = ((metrics['R²'] - full_rba_metrics['R²']) / full_rba_metrics['R²']) * 100
430
+ cv_change = ((metrics['CV'] - full_rba_metrics['CV']) / full_rba_metrics['CV']) * 100
431
+
432
+ impact = IF abs(rmse_change) > 10 THEN "极高"
433
+ ELSE IF abs(rmse_change) > 5 THEN "高"
434
+ ELSE IF abs(rmse_change) > 2 THEN "中等"
435
+ ELSE "低"
436
+
437
+ component_analysis.append({
438
+ 'component': model_name,
439
+ 'rmse_change': rmse_change,
440
+ 'r2_change': r2_change,
441
+ 'cv_change': cv_change,
442
+ 'impact': impact,
443
+ 'abs_impact': abs(rmse_change)
444
+ })
445
+
446
+ sort(component_analysis, key=lambda x: x['abs_impact'], reverse=True)
447
+
448
+ RETURN component_analysis
449
+ ```