import datetime import os import subprocess import sys import numpy as np import pytest import tiledb from tiledb.main import PyFragmentInfo from tiledb.tests.common import DiskTestCase def has_libfaketime(): try: subprocess.check_output(["which", "faketime"]) return True except subprocess.CalledProcessError: return False @pytest.mark.skipif( sys.platform == "win32" or not has_libfaketime(), reason=f"libfaketime not installed. {'Not supported on Windows.' if sys.platform == 'win32' else ''}", ) class TestTimestampOverrides(DiskTestCase): def test_timestamp_overrides(self): uri_fragments = self.path("time_test_fragments") uri_group_metadata = self.path("time_test_group_metadata") python_exe = sys.executable cmd = ( f"from tiledb.tests.test_timestamp_overrides import TestTimestampOverrides; " f"TestTimestampOverrides().helper_fragments('{uri_fragments}'); " f"TestTimestampOverrides().helper_group_metadata('{uri_group_metadata}')" ) test_path = os.path.dirname(os.path.abspath(__file__)) try: # "+x0" is the time multiplier, which makes the time freeze during the test subprocess.check_output( ["faketime", "-f", "+x0", python_exe, "-c", cmd], cwd=test_path ) except subprocess.CalledProcessError as e: raise e def helper_fragments(self, uri): start_datetime = datetime.datetime.now() fragments = 5 A = np.zeros(fragments) dom = tiledb.Domain(tiledb.Dim(domain=(0, 4), tile=fragments, dtype=np.int64)) att = tiledb.Attr(dtype=A.dtype) schema = tiledb.ArraySchema(domain=dom, attrs=(att,)) tiledb.DenseArray.create(uri, schema) uris_seen = set() chronological_order = [] for fragment_idx in range(fragments): with tiledb.DenseArray(uri, mode="w") as T: T[fragment_idx : fragment_idx + 1] = fragment_idx # Read the data back immediately after writing to ensure it is correct with tiledb.DenseArray(uri, mode="r") as T: read_data = T[fragment_idx : fragment_idx + 1] self.assertEqual(read_data, np.array([fragment_idx])) fragment_info = PyFragmentInfo(uri, schema, False, tiledb.default_ctx()) uris = fragment_info.get_uri() new_uri = set(uris) - uris_seen uris_seen.update(uris) chronological_order.extend(new_uri) end_datetime = datetime.datetime.now() self.assertEqual(start_datetime, end_datetime) fragment_info = PyFragmentInfo(uri, schema, False, tiledb.default_ctx()) final_uris = fragment_info.get_uri() # Keep only the last part of the uris final_uris = [os.path.basename(uri) for uri in final_uris] chronological_order = [os.path.basename(uri) for uri in chronological_order] # Check that timestamps are the same (faketime is working) timestamps = set() for uri in final_uris: parts = uri.split("_") timestamps.add((parts[2], parts[3])) self.assertEqual(len(timestamps), 1) # Check that UUIDs are unique uuids = set() for uri in final_uris: parts = uri.split("_") uuids.add(parts[4]) self.assertEqual(len(uuids), fragments) # Ensure that write order is correct self.assertEqual(chronological_order, sorted(final_uris)) def helper_group_metadata(self, uri): vfs = tiledb.VFS() start_datetime = datetime.datetime.now() tiledb.Group.create(uri) loop_count = 10 uris_seen = set() chronological_order = [] meta_path = f"{uri}/__meta" for i in range(loop_count): with tiledb.Group(uri, "w") as grp: grp.meta["meta"] = i # Read the data back immediately after writing to ensure it is correct with tiledb.Group(uri, "r") as grp: self.assertEqual(grp.meta["meta"], i) uris = vfs.ls(meta_path) new_uri = set(uris) - uris_seen uris_seen.update(uris) chronological_order.extend(new_uri) end_datetime = datetime.datetime.now() self.assertEqual(start_datetime, end_datetime) final_uris = vfs.ls(meta_path) # Keep only the last part of the uris final_uris = [os.path.basename(uri) for uri in final_uris] chronological_order = [os.path.basename(uri) for uri in chronological_order] # Check that timestamps are the same (faketime is working) timestamps = set() for uri in final_uris: parts = uri.split("_") timestamps.add((parts[2], parts[3])) self.assertEqual(len(timestamps), 1) # Check that UUIDs are unique uuids = set() for uri in final_uris: parts = uri.split("_") uuids.add(parts[4]) self.assertEqual(len(uuids), loop_count) # Ensure that write order is correct self.assertEqual(chronological_order, sorted(final_uris))