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| import os |
| import tempfile |
| import unittest |
|
|
| import nibabel as nib |
| import numpy as np |
| from parameterized import parameterized |
|
|
| from monai.data import CacheDataset |
| from monai.transforms import Compose, LoadNiftid |
|
|
| TEST_CASE_1 = [0, 100, Compose([LoadNiftid(keys=["image", "label", "extra"])])] |
|
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| TEST_CASE_2 = [4, 100, Compose([LoadNiftid(keys=["image", "label", "extra"])])] |
|
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| TEST_CASE_3 = [4, 100, None] |
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|
| class TestCacheDatasetParallel(unittest.TestCase): |
| @parameterized.expand([TEST_CASE_1, TEST_CASE_2, TEST_CASE_3]) |
| def test_shape(self, num_workers, dataset_size, transform): |
| test_image = nib.Nifti1Image(np.random.randint(0, 2, size=[128, 128, 128]), np.eye(4)) |
| with tempfile.TemporaryDirectory() as tempdir: |
| nib.save(test_image, os.path.join(tempdir, "test_image1.nii.gz")) |
| nib.save(test_image, os.path.join(tempdir, "test_label1.nii.gz")) |
| nib.save(test_image, os.path.join(tempdir, "test_extra1.nii.gz")) |
| test_data = [ |
| { |
| "image": os.path.join(tempdir, "test_image1.nii.gz"), |
| "label": os.path.join(tempdir, "test_label1.nii.gz"), |
| "extra": os.path.join(tempdir, "test_extra1.nii.gz"), |
| } |
| ] * dataset_size |
| dataset = CacheDataset( |
| data=test_data, |
| transform=transform, |
| cache_rate=1, |
| num_workers=num_workers, |
| ) |
|
|
| self.assertEqual(len(dataset._cache), dataset.cache_num) |
| for i in range(dataset.cache_num): |
| self.assertIsNotNone(dataset._cache[i]) |
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|
|
| if __name__ == "__main__": |
| unittest.main() |
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