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881f9f2 d606d10 881f9f2 d606d10 881f9f2 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 | """Link profiling capture artifacts to the benchmark run's WandB run.
The benchmark runner (``scripts/run_experiment.sh``) writes ``wandb_run_url``
into ``benchmarks/cell_<X>/raw/<run-id>/{meta,summary,config}.json`` after the
benchmark finishes. This script takes a matched pair of:
- a benchmark run dir (``benchmarks/cell_<X>/raw/<run-id>/``)
- a profiling capture dir (``profiling/traces/<run-id>/``)
and attaches the profiling artifacts to the same WandB run by resuming it via
the run ID parsed from ``wandb_run_url``. Also parses ``nvidia_smi.csv`` for
summary stats (mean / max GPU util, mean / max memory, duration) and writes
them into the run's summary so Anonymous reviewer's notebooks can query them without
re-parsing the CSV.
Intended invocation (from ``capture_around.sh`` or a follow-up Slurm step):
python3 profiling/scripts/log_profiling_to_wandb.py \\
--benchmark-run-dir benchmarks/cell_A_direct/raw/<run-id> \\
--profiling-dir profiling/traces/<run-id>
The script is a no-op (exit 0 with a warning) if the benchmark dir lacks a
``wandb_run_url``, e.g. for local dry runs without WandB enabled. This lets
the capture wrapper call it unconditionally.
"""
from __future__ import annotations
import argparse
import json
import logging
import pathlib
import re
import sys
from typing import Optional
log = logging.getLogger("log_profiling_to_wandb")
def _parse_run_id_from_url(url: str) -> Optional[tuple[str, str, str]]:
"""Return (entity, project, run_id) from a WandB run URL, or None."""
match = re.match(r"https?://(?:[^/]+/)?([^/]+)/([^/]+)/runs/([^/?#]+)", url.strip())
if not match:
return None
return match.group(1), match.group(2), match.group(3)
def _summarize_nvidia_smi(csv_path: pathlib.Path) -> dict[str, float]:
"""Compute summary stats from the nvidia-smi sampler CSV."""
try:
import pandas as pd
except ImportError:
log.warning("pandas not installed; skipping nvidia-smi summary.")
return {}
if not csv_path.exists():
return {}
# The sampler writes columns with spaces and units, e.g.
# " utilization.gpu [%]", " memory.used [MiB]". Strip whitespace + units.
def _normalize_col(c: str) -> str:
c = c.strip()
c = re.sub(r"\s*\[[^\]]+\]", "", c)
c = c.replace(".", "_").replace(" ", "_")
return c
df = pd.read_csv(csv_path)
df.columns = [_normalize_col(c) for c in df.columns]
stats: dict[str, float] = {}
def _numeric(col: str):
if col not in df.columns:
return None
# strip trailing unit strings that slipped through ("65 %", "3245 MiB")
series = (
df[col]
.astype(str)
.str.extract(r"([-+]?\d*\.?\d+)", expand=False)
.astype(float)
)
return series
util = _numeric("utilization_gpu")
if util is not None and not util.empty:
stats["profiling/gpu_util_mean"] = float(util.mean())
stats["profiling/gpu_util_max"] = float(util.max())
mem_util = _numeric("utilization_memory")
if mem_util is not None and not mem_util.empty:
stats["profiling/mem_util_mean"] = float(mem_util.mean())
mem_used = _numeric("memory_used")
if mem_used is not None and not mem_used.empty:
stats["profiling/gpu_mem_used_mib_mean"] = float(mem_used.mean())
stats["profiling/gpu_mem_used_mib_max"] = float(mem_used.max())
power = _numeric("power_draw")
if power is not None and not power.empty:
stats["profiling/power_draw_w_mean"] = float(power.mean())
stats["profiling/power_draw_w_max"] = float(power.max())
stats["profiling/nvidia_smi_samples"] = int(len(df))
return stats
def main(argv: list[str]) -> int:
logging.basicConfig(level=logging.INFO, format="%(levelname)s: %(message)s")
parser = argparse.ArgumentParser(description=__doc__)
parser.add_argument("--benchmark-run-dir", required=True, type=pathlib.Path)
parser.add_argument("--profiling-dir", required=True, type=pathlib.Path)
parser.add_argument(
"--artifact-name",
default=None,
help="Override for the WandB Artifact name (defaults to profiling-<run-id>).",
)
parser.add_argument(
"--mode",
default="online",
help="WandB run mode (online|offline|disabled). Default online.",
)
args = parser.parse_args(argv)
bench_dir: pathlib.Path = args.benchmark_run_dir.resolve()
prof_dir: pathlib.Path = args.profiling_dir.resolve()
# Repo root is two parents up from this script: profiling/scripts/ -> repo/.
# Used to relativize prof_dir before writing it into meta.json so committed
# artifacts don't leak personal scratch paths like
# /path/to/profiling/traces/...
# which break for anyone reading the meta from the team checkout.
repo_root = pathlib.Path(__file__).resolve().parent.parent.parent
try:
prof_dir_for_meta = str(prof_dir.relative_to(repo_root))
except ValueError:
prof_dir_for_meta = str(prof_dir)
if not bench_dir.is_dir():
log.error("benchmark run dir does not exist: %s", bench_dir)
return 1
if not prof_dir.is_dir():
log.error("profiling dir does not exist: %s", prof_dir)
return 1
meta_path = bench_dir / "meta.json"
if not meta_path.exists():
log.error("no meta.json in %s", bench_dir)
return 1
meta = json.loads(meta_path.read_text(encoding="utf-8"))
run_url = meta.get("wandb_run_url")
run_id_meta = meta.get("run_id")
if not run_url:
log.warning(
"meta.json has no wandb_run_url (ENABLE_WANDB=0 for that run?); "
"skipping WandB upload. meta run_id=%s",
run_id_meta,
)
return 0
parsed = _parse_run_id_from_url(run_url)
if parsed is None:
log.error("could not parse WandB run URL: %s", run_url)
return 1
entity, project, wandb_run_id = parsed
try:
import wandb
except ImportError:
log.error("wandb package not installed; cannot upload. Add wandb to the venv.")
return 1
stats = _summarize_nvidia_smi(prof_dir / "nvidia_smi.csv")
artifact_name = args.artifact_name or f"profiling-{run_id_meta or wandb_run_id}"
log.info(
"resuming WandB run %s/%s/%s to attach profiling artifact %s",
entity,
project,
wandb_run_id,
artifact_name,
)
run = wandb.init(
entity=entity,
project=project,
id=wandb_run_id,
resume="allow",
mode=args.mode,
)
# Attach all files under the profiling dir as a single Artifact
artifact = wandb.Artifact(
name=artifact_name,
type="profiling",
description=(
f"Profiling capture for benchmark run {run_id_meta}. "
"Includes nvidia-smi sampler CSV, optional nsys report + stats, "
"optional PyTorch Profiler traces, and capture_meta.json."
),
)
for path in sorted(prof_dir.rglob("*")):
if path.is_file():
artifact.add_file(str(path), name=str(path.relative_to(prof_dir)))
run.log_artifact(artifact)
if stats:
run.summary.update(stats)
# Also annotate the run config with where the profiling dir lives so
# downstream notebooks can find the raw files on disk. Use the
# repo-root-relative form when possible.
run.config.update(
{
"profiling_dir": prof_dir_for_meta,
"profiling_artifact": artifact_name,
},
allow_val_change=True,
)
run.finish()
# Write the profiling link back into the benchmark run's meta.json so
# the filesystem record matches what's in WandB. Relative path keeps the
# committed meta portable across team / personal-scratch checkouts.
meta["profiling_dir"] = prof_dir_for_meta
meta["profiling_artifact"] = artifact_name
if stats:
meta.setdefault("profiling_summary", {}).update(stats)
meta_path.write_text(json.dumps(meta, indent=2) + "\n", encoding="utf-8")
log.info(
"logged profiling artifact %s and %d summary stat(s)", artifact_name, len(stats)
)
return 0
if __name__ == "__main__":
raise SystemExit(main(sys.argv[1:]))
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