lfj-code / transfer /code /CCFM /run_v2_resume.sh
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#!/bin/bash
#PJM -L rscgrp=b-batch
#PJM -L gpu=4
#PJM -L elapse=24:00:00
#PJM -N ccfm_v2_resume
#PJM -j
#PJM -o logs/ccfm_v2_resume_%j.out
module load cuda/12.2.2
module load cudnn/8.9.7
module load gcc-toolset/12
source /home/hp250092/ku50001222/qian/aivc/lfj/stack_env/bin/activate
cd /home/hp250092/ku50001222/qian/aivc/lfj/transfer/code/CCFM
export PYTORCH_CUDA_ALLOC_CONF=max_split_size_mb:256
echo "=========================================="
echo "Job ID: $PJM_JOBID"
echo "Job Name: $PJM_JOBNAME"
echo "Start: $(date)"
echo "Node: $(hostname)"
echo "GPU: $(nvidia-smi --query-gpu=name,memory.total --format=csv,noheader 2>/dev/null || echo 'N/A')"
echo "Run: CCFM v2 RESUME from iteration_100000"
echo "=========================================="
accelerate launch --num_processes=4 scripts/run_cascaded.py \
--data-name norman \
--d-model 128 \
--nhead 8 \
--nlayers 4 \
--batch-size 48 \
--lr 5e-5 \
--steps 200000 \
--fusion-method differential_perceiver \
--perturbation-function crisper \
--noise-type Gaussian \
--infer-top-gene 1000 \
--n-top-genes 5000 \
--use-mmd-loss \
--gamma 0.5 \
--split-method additive \
--fold 1 \
--scgpt-dim 512 \
--bottleneck-dim 128 \
--latent-weight 1.0 \
--choose-latent-p 0.4 \
--dh-depth 2 \
--print-every 10000 \
--topk 30 \
--use-negative-edge \
--ema-decay 0.9999 \
--t-sample-mode logit_normal \
--t-expr-mean 0.0 \
--t-expr-std 1.0 \
--t-latent-mean 0.0 \
--t-latent-std 1.0 \
--warmup-steps 2000 \
--ode-method rk4 \
--result-path ./result \
--checkpoint-path ./result/ccfm-norman-f1-topk30-negTrue-d128-lr5e-05-lw1.0-lp0.4-ema0.9999-ln-wu2000-rk4-online/iteration_100000/checkpoint.pt
echo "=========================================="
echo "Finished: $(date)"
echo "=========================================="