src/esdac/heavy-metals-topsoils/process.py

from pathlib import Path

from src.process.io import prepare_dirs, unzip, unzip_nested, upload
from src.process.processor import process_tif

# === Step 1: Set up paths for local and drive directories ===
local_processed_dir, drive_download_dir, drive_processed_dir = (
    prepare_dirs("esdac", Path(__file__).parent.stem)
)

# === Step 2: Extract all ZIP files from drive/download to local/processed ===
unzip(local_processed_dir, drive_download_dir)

# === Step 3: Recursively extract nested ZIPs
unzip_nested(local_processed_dir)

# === Step 4: Process all .asc files (convert to .npz, .png, .standardized.tif) ===
move_list = []
for asc_path in local_processed_dir.rglob("*.asc"):
    move_list = process_tif(asc_path, move_list)

# === Step 5: Upload processed files to drive/processed and remove local copy ===
upload(local_processed_dir, drive_processed_dir, move_list)