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  1. README.md +5 -5
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@@ -47,7 +47,7 @@ Code to fine-tune and evaluate models on this dataset using the Hugging Face Tra
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  - **Exome-Specific Regions**: Filter the variants to include only those located in exome-specific regions (GENCODE v.38).
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  ### Sequence Generation
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- - **Human Reference Genome (HRG, GRCh38)**: For each variant, generate input sequences from the HRG using genome.
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  - **Sequence Length**: The length of the sequences is a parameter, typically set to 100 base pairs (bp).
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  - **Variant Positioning**: The variant is centered within the sequence, which is read in from a FASTA file.
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@@ -208,11 +208,11 @@ If you find our work valuable, please consider giving the project a star and cit
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  ```bib
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  @article{ExomeBench,
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- DOI={10.2139/ssrn.5183178},
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- title={Introducing STRAND: A Foundational Sequence Transformer for Range Adaptive Nucleotide Decoding},
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- author={Ayanian, Shant and Osborne, Andrew and Xu, Clark and Molnar, Carl and Das, Pravat and Perez, Xoab and Natalia, Vassilieva and Pondenkandath, Vinay and Kanakiya, Bhargav and Venkatesh, Ganesh and et al.},
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  year={2025},
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- journal={Research Square Pre-print}
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  }
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  ```
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  Thank you for your support!
 
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  - **Exome-Specific Regions**: Filter the variants to include only those located in exome-specific regions (GENCODE v.38).
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  ### Sequence Generation
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+ - **Human Reference Genome (HRG, GRCh38)**: For each variant, generate input sequences from the HRG using the variants from the ClinVar database.
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  - **Sequence Length**: The length of the sequences is a parameter, typically set to 100 base pairs (bp).
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  - **Variant Positioning**: The variant is centered within the sequence, which is read in from a FASTA file.
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  ```bib
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  @article{ExomeBench,
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+ DOI={https://doi.org/10.1093/bib/bbaf618},
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+ title={Introducing a foundational sequence transformer for range adaptive nucleotide decoding (STRAND)},
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+ author={Ayanian, Shant et al.},
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  year={2025},
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+ journal={Briefings in Bioinformatics, Volume 26, Issue 6}
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  }
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  ```
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  Thank you for your support!