Run `pre-commit run --all-files`

.pre-commit-config.yaml

@@ -0,0 +1,59 @@
+repos:
+  - repo: https://github.com/Lucas-C/pre-commit-hooks
+    rev: v1.5.5
+    hooks:
+      - id: forbid-crlf
+      - id: remove-crlf
+  - repo: https://github.com/pre-commit/pre-commit-hooks
+    rev: v5.0.0
+    hooks:
+      - id: check-added-large-files
+        args: ['--maxkb=512000']  # 500MB
+      - id: check-executables-have-shebangs
+      - id: check-shebang-scripts-are-executable
+      - id: trailing-whitespace
+        exclude: &exclude_txtfiles >-
+          (?x)^(
+              datasets/.*\.amn|
+              datasets/.*\.mmn|
+              datasets/.*\.eig|
+              datasets/.*\.chk|
+              datasets/.*\.chk\.fmt|
+              datasets/.*\.spn|
+              datasets/.*\.spn\.fmt|
+              datasets/.*\.uHu\.fmt|
+              datasets/.*\.mud|
+              datasets/.*\.nnkp|
+              datasets/.*\.wout|
+              datasets/.*\.wpout|
+              datasets/.*_band\.dat|
+              datasets/.*_band\.kpt|
+              datasets/.*_band\.labelinfo\.dat|
+              datasets/.*_tb\.dat|
+              datasets/.*_hr\.dat|
+              datasets/.*_r\.dat|
+              datasets/.*_wsvec\.dat|
+              datasets/.*_u\.mat|
+              datasets/.*_u_dis\.mat|
+              datasets/.*\.xsf|
+              datasets/.*\.bxsf|
+              datasets/.*\.cube|
+              datasets/.*\.gnu|
+              datasets/.*-bands\.dat|
+              datasets/.*-curv\.dat|
+              datasets/.*-morb\.dat
+          )$
+      - id: mixed-line-ending
+        exclude: *exclude_txtfiles
+      - id: end-of-file-fixer
+        exclude: *exclude_txtfiles
+      - id: check-merge-conflict
+      - id: check-yaml
+        args: [ --unsafe ]
+      - id: check-json
+      - id: check-toml
+      - id: check-xml
+  - repo: https://github.com/qiaojunfeng/pre-commit-julia-format
+    rev: v0.2.0
+    hooks:
+    - id: julia-format

datasets/BN/inputs/LGXKG.txt

@@ -110,7 +110,7 @@
 0.604166666667   0.604166666667   0.208333333333 0.00151975683891
 0.611111111111   0.611111111111   0.222222222222 0.00151975683891
 0.618055555556   0.618055555556   0.236111111111 0.00151975683891
-0.625            0.625            0.25           0.00151975683891 
+0.625            0.625            0.25           0.00151975683891
 0.739386792453   0.369693396226   0.369693396226 0.00151975683891
 0.725235849057   0.362617924528   0.362617924528 0.00151975683891
 0.71108490566   0.35554245283   0.35554245283 0.00151975683891

make_artifacts.jl

@@ -22,7 +22,7 @@ const deploy_branch = "artifacts"
 folder: e.g. `"Si2"`
 local_url: use local file path for the url, for testing only
 """
-function create_artifact(folder::AbstractString; local_url::Bool=false)
+function create_artifact(folder::AbstractString; local_url::Bool = false)
     fullpath = joinpath(datasets_dir, folder)
     isdir(fullpath) || return
 
@@ -75,12 +75,13 @@ function create_artifact(folder::AbstractString; local_url::Bool=false)
     end
 
     artifact_name = folder
-    res = artifact_name => Dict(
-        "git-tree-sha1" => Tar.tree_hash(IOBuffer(inflate_gzip(outpath))),
-        "lazy" => true,
-        "download" =>
-            [Dict("url" => url, "sha256" => bytes2hex(open(sha256, outpath)))],
-    )
+    res =
+        artifact_name => Dict(
+            "git-tree-sha1" => Tar.tree_hash(IOBuffer(inflate_gzip(outpath))),
+            "lazy" => true,
+            "download" =>
+                [Dict("url" => url, "sha256" => bytes2hex(open(sha256, outpath)))],
+        )
 
     # print the result as toml
     buf = IOBuffer()
@@ -91,7 +92,7 @@ function create_artifact(folder::AbstractString; local_url::Bool=false)
     return res
 end
 
-function git_hash(path::AbstractString; branch::AbstractString="HEAD")
+function git_hash(path::AbstractString; branch::AbstractString = "HEAD")
     return read(`git log -n 1 --pretty=format:"%H" $branch -- "$path"`, String)
 end
 
@@ -109,7 +110,7 @@ function list_previous_artifacts()
     # to create the artifacts branch
     files = split(read(`git ls-tree -r --name-only $deploy_branch`, String))
     filter!(f -> endswith(f, ".tar.gz"), files)
-    return Dict(f => git_hash(f; branch=deploy_branch) for f in files)
+    return Dict(f => git_hash(f; branch = deploy_branch) for f in files)
 end
 
 function list_new_folders()
@@ -141,7 +142,7 @@ function clean_artifacts_dir()
         println("Aborting...")
         return false
     end
-    rm(artifacts_dir; force=true, recursive=true)
+    rm(artifacts_dir; force = true, recursive = true)
     mkpath(artifacts_dir)
     println("Cleaned `$(artifacts_dir)` folder.")
     return true